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	Author	Fernando Vilariño; Petia Radeva
	Title	Patch-Optimized Discriminant Active Contours for Medical Image Segmentation.			Type	Conference Article
	Year	2002	Publication	Iberoamerican Conference on Artificial Intelligence	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Sevilla, Espanya
	Corporate Author				Thesis
	Publisher	Springer Verlag	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IBERAMIA
	Notes	MV;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ ViR2002; IAM @ iam @ VRa2003			Serial	320
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	Author	Fernando Vilariño; Petia Radeva
	Title	Cardiac Segmentation with Discriminant Active Contours			Type	Book Chapter
	Year	2003	Publication		Abbreviated Journal
	Volume		Issue		Pages	211–217
	Keywords
	Abstract	Dynamic tracking of heart moving is one relevant target in medical imag- ing and can be helpful for analyzing heart dynamics in the study of several cardiac diseases. For this aim, a previous segmentation problem of such structures is stated, based on certain relevant features (like edges or intensity levels, textures, etc.) Clas- sical active models have been used, but they fail when overlapping structures or not well-defined contours are present. Automatic feature learning systems may be a pow- erful tool. Discriminant active contours present optimal results in this kind of problem. They are a kind of deformable models that converge to an optimal object segmenta- tion that dynamically adapts to the object contour. The feature space is designed from a filter bank in order to guarantee the search and learning of the set of relevant fea- tures for optimal classification on each part of the object. Tracking of target evolution is obtained through the whole set of images, using information from the actual and previous stages. Feedback systems are implemented to guarantee the minimum well- separable classification set in each segmentation step. Our implementation has been proved with several series of Magnetic Resonance with improved results in segmenta- tion in comparison to previous methods.
	Address	Palma de Mallorca
	Corporate Author				Thesis
	Publisher	IOS Press	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CCIA
	Notes	MV;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ ViR2003; IAM @ iam @ VRa2003			Serial	426
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	Author	Fernando Vilariño; Ludmila I. Kuncheva; Petia Radeva
	Title	ROC curves and video analysis optimization in intestinal capsule endoscopy			Type	Journal Article
	Year	2006	Publication	Pattern Recognition Letters	Abbreviated Journal	PRL
	Volume	27	Issue	8	Pages	875–881
	Keywords	ROC curves; Classification; Classifiers ensemble; Detection of intestinal contractions; Imbalanced classes; Wireless capsule endoscopy
	Abstract	Wireless capsule endoscopy involves inspection of hours of video material by a highly qualified professional. Time episodes corresponding to intestinal contractions, which are of interest to the physician constitute about 1% of the video. The problem is to label automatically time episodes containing contractions so that only a fraction of the video needs inspection. As the classes of contraction and non-contraction images in the video are largely imbalanced, ROC curves are used to optimize the trade-off between false positive and false negative rates. Classifier ensemble methods and simple classifiers were examined. Our results reinforce the claims from recent literature that classifier ensemble methods specifically designed for imbalanced problems have substantial advantages over simple classifiers and standard classifier ensembles. By using ROC curves with the bagging ensemble method the inspection time can be drastically reduced at the expense of a small fraction of missed contractions.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MILAB;MV;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VKR2006; IAM @ iam @ VKR2006			Serial	647
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	Author	Panagiota Spyridonos; Fernando Vilariño; Jordi Vitria; Fernando Azpiroz; Petia Radeva
	Title	Anisotropic Feature Extraction from Endoluminal Images for Detection of Intestinal Contractions			Type	Book Chapter
	Year	2006	Publication	9th International Conference on Medical Image Computing and Computer–Assisted Intervention	Abbreviated Journal
	Volume	4191	Issue		Pages	161–168
	Keywords
	Abstract	Wireless endoscopy is a very recent and at the same time unique technique allowing to visualize and study the occurrence of con- tractions and to analyze the intestine motility. Feature extraction is es- sential for getting efficient patterns to detect contractions in wireless video endoscopy of small intestine. We propose a novel method based on anisotropic image filtering and efficient statistical classification of con- traction features. In particular, we apply the image gradient tensor for mining informative skeletons from the original image and a sequence of descriptors for capturing the characteristic pattern of contractions. Fea- tures extracted from the endoluminal images were evaluated in terms of their discriminatory ability in correct classifying images as either belong- ing to contractions or not. Classification was performed by means of a support vector machine classifier with a radial basis function kernel. Our classification rates gave sensitivity of the order of 90.84% and specificity of the order of 94.43% respectively. These preliminary results highlight the high efficiency of the selected descriptors and support the feasibility of the proposed method in assisting the automatic detection and analysis of contractions.
	Address	Copenhagen (Denmark)
	Corporate Author				Thesis
	Publisher	Springer Verlag	Place of Publication	Berlin Heidelberg	Editor	R. Larsen, M. Nielsen, and J. Sporring
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	MICCAI06
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ SVV2006; IAM @ iam @ SVV2006			Serial	725
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	Author	Fernando Vilariño; Panagiota Spyridonos; Jordi Vitria; Fernando Azpiroz; Petia Radeva
	Title	Cascade analysis for intestinal contraction detection			Type	Conference Article
	Year	2006	Publication	20th International Congress and exhibition Computer Assisted Radiology and Surgery	Abbreviated Journal
	Volume		Issue		Pages	9-10
	Keywords	intestine video analysis, anisotropic features, support vector machine, cascade of classifiers
	Abstract	In this work, we address the study of intestinal contractions in a novel approach based on a machine learning framework to process data from Wireless Capsule Video Endoscopy. Wireless endoscopy represents a unique way to visualize the intestine motility by creating long videos to visualize intestine dynamics. In this paper we argue that to analyze huge amount of wireless endoscopy data and define robust methods for contraction detection we should base our approach on sophisticated machine learning techniques. In particular, we propose a cascade of classifiers in order to remove different physiological phenomenon and obtain the motility pattern of small intestines. Our results show obtaining high specificity and sensitivity rates that highlight the high efficiency of the selected approach and support the feasibility of the proposed methodology in the automatic detection and analysis of intestine contractions.
	Address	Osaka (Japan)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	CARS
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VSV2006a; IAM @ iam @ VSV2006h			Serial	726
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	Author	Fernando Vilariño; Panagiota Spyridonos; Jordi Vitria; Fernando Azpiroz; Petia Radeva
	Title	Automatic Detection of Intestinal Juices in Wireless Capsule Video Endoscopy			Type	Conference Article
	Year	2006	Publication	18th International Conference on Pattern Recognition	Abbreviated Journal
	Volume	4	Issue		Pages	719-722
	Keywords	Clinical diagnosis , Endoscopes , Fluids and secretions , Gabor filters , Hospitals , Image sequence analysis , Intestines , Lighting , Shape , Visualization
	Abstract	Wireless capsule video endoscopy is a novel and challenging clinical technique, whose major reported drawback relates to the high amount of time needed for video visualization. In this paper, we propose a method for the rejection of the parts of the video resulting not valid for analysis by means of automatic detection of intestinal juices. We applied Gabor filters for the characterization of the bubble-like shape of intestinal juices in fasting patients. Our method achieves a significant reduction in visualization time, with no relevant loss of valid frames. The proposed approach is easily extensible to other image analysis scenarios where the described pattern of bubbles can be found.
	Address	Hong Kong
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1051-4651	ISBN	0-7695-2521-0	Medium
	Area	800	Expedition		Conference	ICPR
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VSV2006b; IAM @ iam @ VSV2006g			Serial	727
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	Author	Fernando Vilariño; Panagiota Spyridonos; Jordi Vitria; C. Malagelada; Petia Radeva
	Title	Linear Radial Patterns Characterization for Automatic Detection of Tonic Intestinal Contractions			Type	Book Chapter
	Year	2006	Publication	11th Iberoamerican Congress on Pattern Recognition	Abbreviated Journal
	Volume	4225	Issue		Pages	178–187
	Keywords
	Abstract	This work tackles the categorization of general linear radial patterns by means of the valleys and ridges detection and the use of descriptors of directional information, which are provided by steerable filters in different regions of the image. We successfully apply our proposal in the specific case of automatic detection of tonic contractions in video capsule endoscopy, which represent a paradigmatic example of linear radial patterns.
	Address	Cancun (Mexico)
	Corporate Author				Thesis
	Publisher	Springer Verlag	Place of Publication	Berlin Heidelberg	Editor	.F. Mart ́ınez-Trinidad et al
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VSV2006c; IAM @ iam @ VSB2006f			Serial	728
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	Author	Fernando Vilariño; Panagiota Spyridonos; Jordi Vitria; C. Malagelada; Petia Radeva
	Title	A Machine Learning framework using SOMs: Applications in the Intestinal Motility Assessment			Type	Book Chapter
	Year	2006	Publication	11th Iberoamerican Congress on Pattern Recognition	Abbreviated Journal
	Volume	4225	Issue		Pages	188–197
	Keywords
	Abstract	Small Bowel Motility Assessment by means of Wireless Capsule Video Endoscopy constitutes a novel clinical methodology in which a capsule with a micro-camera attached to it is swallowed by the patient, emitting a RF signal which is recorded as a video of its trip throughout the gut. In order to overcome the main drawbacks associated with this technique -mainly related to the large amount of visualization time required-, our efforts have been focused on the development of a machine learning system, built up in sequential stages, which provides the specialists with the useful part of the video, rejecting those parts not valid for analysis. We successfully used Self Organized Maps in a general semi-supervised framework with the aim of tackling the different learning stages of our system. The analysis of the diverse types of images and the automatic detection of intestinal contractions is performed under the perspective of intestinal motility assessment in a clinical environment.
	Address	Cancun (Mexico)
	Corporate Author				Thesis
	Publisher	Springer Verlag	Place of Publication	Berlin-Heidelberg	Editor	J.P. Martinez–Trinidad et al
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	CIARP06
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VSV2006d; IAM @ iam @ VSV2006e			Serial	729
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	Author	Fernando Vilariño
	Title	A Machine Learning Approach for Intestinal Motility Assessment with Capsule Endoscopy			Type	Book Whole
	Year	2006	Publication	PhD Thesis, Universitat Autonoma de Barcelona-CVC	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Intestinal motility assessment with video capsule endoscopy arises as a novel and challenging clinical fieldwork. This technique is based on the analysis of the patterns of intestinal contractions obtained by labelling all the motility events present in a video provided by a capsule with a wireless micro-camera, which is ingested by the patient. However, the visual analysis of these video sequences presents several im- portant drawbacks, mainly related to both the large amount of time needed for the visualization process, and the low prevalence of intestinal contractions in video. In this work we propose a machine learning system to automatically detect the intestinal contractions in video capsule endoscopy, driving a very useful but not fea- sible clinical routine into a feasible clinical procedure. Our proposal is divided into two different parts: The first part tackles the problem of the automatic detection of phasic contractions in capsule endoscopy videos. Phasic contractions are dynamic events spanning about 4-5 seconds, which show visual patterns with a high variability. Our proposal is based on a sequential design which involves the analysis of textural, color and blob features with powerful classifiers such as SVM. This approach appears to cope with two basic aims: the reduction of the imbalance rate of the data set, and the modular construction of the system, which adds the capability of including domain knowledge as new stages in the cascade. The second part of the current work tackles the problem of the automatic detection of tonic contractions. Tonic contrac- tions manifest in capsule endoscopy as a sustained pattern of the folds and wrinkles of the intestine, which may be prolonged for an undetermined span of time. Our proposal is based on the analysis of the wrinkle patterns, presenting a comparative study of diverse features and classification methods, and providing a set of appro- priate descriptors for their characterization. We provide a detailed analysis of the performance achieved by our system both in a qualitative and a quantitative way.
	Address	CVC (UAB)
	Corporate Author				Thesis	Ph.D. thesis
	Publisher		Place of Publication		Editor	Petia Radeva
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue	84-933652-7-0	Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ Vil2006; IAM @ iam @ Vil2006			Serial	738
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	Author	Santiago Segui; Laura Igual; Fernando Vilariño; Petia Radeva; C. Malagelada; Fernando Azpiroz; Jordi Vitria
	Title	Diagnostic System for Intestinal Motility Disfunctions Using Video Capsule Endoscopy			Type	Book Chapter
	Year	2008	Publication	Computer Vision Systems. 6th International	Abbreviated Journal
	Volume	5008	Issue		Pages	251–260
	Keywords
	Abstract	Wireless Video Capsule Endoscopy is a clinical technique consisting of the analysis of images from the intestine which are pro- vided by an ingestible device with a camera attached to it. In this paper we propose an automatic system to diagnose severe intestinal motility disfunctions using the video endoscopy data. The system is based on the application of computer vision techniques within a machine learn- ing framework in order to obtain the characterization of diverse motil- ity events from video sequences. We present experimental results that demonstrate the effectiveness of the proposed system and compare them with the ground-truth provided by the gastroenterologists.
	Address	Santorini (Greece)
	Corporate Author				Thesis
	Publisher	Springer-Verlag	Place of Publication	Berlin Heidelberg	Editor	A. Gasteratos, M. Vincze, and J.K. Tsotsos
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-540-79546-9	Medium
	Area	800	Expedition		Conference	ICVS
	Notes	OR; MV; MILAB; SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ SIV2008; IAM @ iam @ SIV2008			Serial	962
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	Author	Robert Benavente; Laura Igual; Fernando Vilariño
	Title	Current Challenges in Computer Vision			Type	Book Whole
	Year	2008	Publication	Proccedings of the Third Internal Workshop	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-84-936529-0-6	Medium
	Area		Expedition		Conference	CVCRD
	Notes	MILAB;CIC;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ BIV2008			Serial	1110
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	Author	Fernando Vilariño; Panagiota Spyridonos; Fosca De Iorio; Jordi Vitria; Fernando Azpiroz; Petia Radeva
	Title	Intestinal Motility Assessment With Video Capsule Endoscopy: Automatic Annotation of Phasic Intestinal Contractions			Type	Journal Article
	Year	2010	Publication	IEEE Transactions on Medical Imaging	Abbreviated Journal	TMI
	Volume	29	Issue	2	Pages	246-259
	Keywords
	Abstract	Intestinal motility assessment with video capsule endoscopy arises as a novel and challenging clinical fieldwork. This technique is based on the analysis of the patterns of intestinal contractions shown in a video provided by an ingestible capsule with a wireless micro-camera. The manual labeling of all the motility events requires large amount of time for offline screening in search of findings with low prevalence, which turns this procedure currently unpractical. In this paper, we propose a machine learning system to automatically detect the phasic intestinal contractions in video capsule endoscopy, driving a useful but not feasible clinical routine into a feasible clinical procedure. Our proposal is based on a sequential design which involves the analysis of textural, color, and blob features together with SVM classifiers. Our approach tackles the reduction of the imbalance rate of data and allows the inclusion of domain knowledge as new stages in the cascade. We present a detailed analysis, both in a quantitative and a qualitative way, by providing several measures of performance and the assessment study of interobserver variability. Our system performs at 70% of sensitivity for individual detection, whilst obtaining equivalent patterns to those of the experts for density of contractions.
	Address
	Corporate Author	IEEE			Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0278-0062	ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MILAB;MV;OR;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VSD2010; IAM @ iam @ VSI2010			Serial	1281
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	Author	Jorge Bernal; Fernando Vilariño; F. Javier Sanchez
	Title	Feature Detectors and Feature Descriptors: Where We Are Now			Type	Report
	Year	2010	Publication	CVC Technical Report	Abbreviated Journal
	Volume	154	Issue		Pages
	Keywords
	Abstract	Feature Detection and Feature Description are clearly nowadays topics. Many Computer Vision applications rely on the use of several of these techniques in order to extract the most significant aspects of an image so they can help in some tasks such as image retrieval, image registration, object recognition, object categorization and texture classification, among others. In this paper we define what Feature Detection and Description are and then we present an extensive collection of several methods in order to show the different techniques that are being used right now. The aim of this report is to provide a glimpse of what is being used currently in these fields and to serve as a starting point for future endeavours.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ BVS2010; IAM @ iam @ BVS2010			Serial	1348
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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Reduction of Pattern Search Area in Colonoscopy Images by Merging Non-Informative Regions			Type	Conference Article
	Year	2010	Publication	28th Congreso Anual de la Sociedad Española de Ingeniería Biomédica	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	One of the first usual steps in pattern recognition schemas is image segmentation, in order to reduce the dimensionality of the problem and manage smaller quantity of data. In our case as we are pursuing real-time colon cancer polyp detection, this step is crucial. In this paper we present a non-informative region estimation algorithm that will let us discard some parts of the image where we will not expect to find colon cancer polyps. The performance of our approach will be measured in terms of both non-informative areas elimination and polyps’ areas preserving. The results obtained show the importance of having correct non- informative region estimation in order to fasten the whole recognition process.
	Address	Madrid (Spain)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	CASEIB
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ BSV2010			Serial	1469
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	Author	Debora Gil; Petia Radeva; Fernando Vilariño
	Title	Anisotropic Contour Completion			Type	Conference Article
	Year	2003	Publication	Proceedings of the IEEE International Conference on Image Processing	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	In this paper we introduce a novel application of the diffusion tensor for anisotropic image processing. The Anisotropic Contour Completion (ACC) we suggest consists in extending the characteristic function of the open curve by means of a degenerated diffusion tensor that prevents any diffusion in the normal direction. We show that ACC is equivalent to a dilation with a continuous elliptic structural element that takes into account the local orientation of the contours to be closed. Experiments on contours extracted from real images show that ACC produces shapes able to adapt to any curve in an active contour framework. 1.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Barcelona, Spain	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	0-7803-7751-6	Medium
	Area		Expedition		Conference
	Notes	IAM;MV;MILAB;SIAI			Approved	no
	Call Number	IAM @ iam @ GRV2003			Serial	1539
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	Author	Fernando Vilariño; Debora Gil; Petia Radeva
	Title	A Novel FLDA Formulation for Numerical Stability Analysis			Type	Book Chapter
	Year	2004	Publication	Recent Advances in Artificial Intelligence Research and Development	Abbreviated Journal
	Volume	113	Issue		Pages	77-84
	Keywords	Supervised Learning; Linear Discriminant Analysis; Numerical Stability; Computer Vision
	Abstract	Fisher Linear Discriminant Analysis (FLDA) is one of the most popular techniques used in classification applying dimensional reduction. The numerical scheme involves the inversion of the within-class scatter matrix, which makes FLDA potentially ill-conditioned when it becomes singular. In this paper we present a novel explicit formulation of FLDA in terms of the eccentricity ratio and eigenvector orientations of the within-class scatter matrix. An analysis of this function will characterize those situations where FLDA response is not reliable because of numerical instability. This can solve common situations of poor classification performance in computer vision.
	Address
	Corporate Author				Thesis
	Publisher	IOS Press	Place of Publication		Editor	J. Vitrià, P. Radeva and I. Aguiló
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-1-58603-466-5	Medium
	Area		Expedition		Conference
	Notes	MV;IAM;MILAB;SIAI			Approved	no
	Call Number	IAM @ iam @ VGR2004			Serial	1663
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	Author	Fernando Vilariño; Enric Marti
	Title	New didactic techniques in the EHES applying mobile technologies			Type	Miscellaneous
	Year	2008	Publication	Agencia de Gestio d´Ajuts Universitaris I de Recerca (AGAUR), Generalitat de Catalunya	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author	Agencia de Gestió d’Ajuts Universitaris I de Recerca (AGAUR), Generalitat de Catalunya			Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	Agencia de Gestio d´Ajuts Universitaris I de Recerca (AGAUR), Generalitat de Catalunya	Expedition		Conference
	Notes	MILAB;IAM;MV;SIAI			Approved	no
	Call Number	IAM @ iam @ VIM2008			Serial	1664
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	Author	Onur Ferhat; Fernando Vilariño
	Title	A Cheap Portable Eye-Tracker Solution for Common Setups			Type	Conference Article
	Year	2013	Publication	17th European Conference on Eye Movements	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Low cost; eye-tracker; software; webcam; Raspberry Pi
	Abstract	We analyze the feasibility of a cheap eye-tracker where the hardware consists of a single webcam and a Raspberry Pi device. Our aim is to discover the limits of such a system and to see whether it provides an acceptable performance. We base our work on the open source Opengazer (Zielinski, 2013) and we propose several improvements to create a robust, real-time system. After assessing the accuracy of our eye-tracker in elaborated experiments involving 18 subjects under 4 different system setups, we developed a simple game to see how it performs in practice and we also installed it on a Raspberry Pi to create a portable stand-alone eye-tracker which achieves 1.62° horizontal accuracy with 3 fps refresh rate for a building cost of 70 Euros.
	Address	Lund; Sweden; August 2013
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ECEM
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ FeV2013			Serial	2374
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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Current Challenges on Polyp Detection in Colonoscopy Videos: From Region Segmentation to Region Classification. a Pattern Recognition-based Approach.ased Approach			Type	Conference Article
	Year	2011	Publication	2nd International Workshop on Medical Image Analysis and Descriptionfor Diagnosis Systems	Abbreviated Journal
	Volume		Issue		Pages	62-71
	Keywords	Medical Imaging, Colonoscopy, Pattern Recognition, Segmentation, Polyp Detection, Region Description, Machine Learning, Real-time.
	Abstract	In this paper we present our approach on real-time polyp detection in colonoscopy videos. Our method consists of three stages: Image Segmentation, Region Description and Image Classification. Taking into account the constraints of our project, we introduce our segmentation system that is based on the model of appearance of the polyp that we have defined after observing real videos from colonoscopy processes. The output of this stage will ideally be a low number of regions of which one of them should cover the whole polyp region (if there is one in the image). This regions will be described in terms of features and, as a result of a machine learning schema, classified based on the values that they have for the several features that we will use on their description. Although we are still on the early stages of the project, we present some preliminary segmentation results that indicates that we are going in a good direction.
	Address	Rome, Italy
	Corporate Author				Thesis
	Publisher	SciTePress	Place of Publication		Editor	Djemal, Khalifa
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	MIAD
	Notes	MV;SIAI			Approved	no
	Call Number	IAM @ iam @ BSV2011a			Serial	1695
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	Author	Jorge Bernal; Fernando Vilariño; F. Javier Sanchez
	Title	Towards Intelligent Systems for Colonoscopy			Type	Book Chapter
	Year	2011	Publication	Colonoscopy	Abbreviated Journal
	Volume	1	Issue		Pages	257-282
	Keywords
	Abstract	In this chapter we present tools that can be used to build intelligent systems for colonoscopy. The idea is, by using methods based on computer vision and artiﬁcial intelligence, add signiﬁcant value to the colonoscopy procedure. Intelligent systems are being used to assist in other medical interventions
	Address
	Corporate Author				Thesis
	Publisher	Intech	Place of Publication		Editor	Paul Miskovitz
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-953-307-568-6	Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	IAM @ iam @ BVS2011			Serial	1697
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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Depth of Valleys Accumulation Algorithm for Object Detection			Type	Conference Article
	Year	2011	Publication	14th Congrès Català en Intel·ligencia Artificial	Abbreviated Journal
	Volume	1	Issue	1	Pages	71-80
	Keywords	Object Recognition, Object Region Identification, Image Analysis, Image Processing
	Abstract	This work aims at detecting in which regions the objects in the image are by using information about the intensity of valleys, which appear to surround ob- jects in images where the source of light is in the line of direction than the camera. We present our depth of valleys accumulation method, which consists of two stages: first, the definition of the depth of valleys image which combines the output of a ridges and valleys detector with the morphological gradient to measure how deep is a point inside a valley and second, an algorithm that denotes points of the image as interior to objects those which are inside complete or incomplete boundaries in the depth of valleys image. To evaluate the performance of our method we have tested it on several application domains. Our results on object region identification are promising, specially in the field of polyp detection in colonoscopy videos, and we also show its applicability in different areas.
	Address	Lleida
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-1-60750-841-0	Medium
	Area	800	Expedition		Conference	CCIA
	Notes	MV;SIAI			Approved	no
	Call Number	IAM @ iam @ BSV2011b			Serial	1699
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	Author	Farhan Riaz; Fernando Vilariño; Mario Dinis-Ribeiro; Miguel Coimbraln
	Title	Identifying Potentially Cancerous Tissues in Chromoendoscopy Images			Type	Conference Article
	Year	2011	Publication	5th Iberian Conference on Pattern Recognition and Image Analysis	Abbreviated Journal
	Volume	6669	Issue		Pages	709-716
	Keywords	Endoscopy, Computer Assisted Diagnosis, Gradient.
	Abstract	The dynamics of image acquisition conditions for gastroenterology imaging scenarios pose novel challenges for automatic computer assisted decision systems. Such systems should have the ability to mimic the tissue characterization of the physicians. In this paper, our objective is to compare some feature extraction methods to classify a Chromoendoscopy image into two different classes: Normal and Potentially cancerous. Results show that LoG filters generally give best classification accuracy among the other feature extraction methods considered.
	Address	Las Palmas de Gran Canaria. Spain
	Corporate Author				Thesis
	Publisher	Springer	Place of Publication	Berlin	Editor	J. Vitria, J.M. Sanches, and M. Hernandez
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-642-21256-7	Medium
	Area	800	Expedition		Conference	IbPRIA
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ RVD2011; IAM @ iam @ RVD2011			Serial	1726
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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Impact of Image Preprocessing Methods on Polyp Localization in Colonoscopy Frames			Type	Conference Article
	Year	2013	Publication	35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society	Abbreviated Journal
	Volume		Issue		Pages	7350 - 7354
	Keywords
	Abstract	In this paper we present our image preprocessing methods as a key part of our automatic polyp localization scheme. These methods are used to assess the impact of different endoluminal scene elements when characterizing polyps. More precisely we tackle the influence of specular highlights, blood vessels and black mask surrounding the scene. Experimental results prove that the appropriate handling of these elements leads to a great improvement in polyp localization results.
	Address	Osaka; Japan; July 2013
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1557-170X	ISBN		Medium
	Area	800	Expedition		Conference	EMBC
	Notes	MV; 600.047; 600.060;SIAI			Approved	no
	Call Number	Admin @ si @ BSV2013			Serial	2286
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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Towards Automatic Polyp Detection with a Polyp Appearance Model			Type	Journal Article
	Year	2012	Publication	Pattern Recognition	Abbreviated Journal	PR
	Volume	45	Issue	9	Pages	3166-3182
	Keywords	Colonoscopy,PolypDetection,RegionSegmentation,SA-DOVA descriptot
	Abstract	This work aims at the automatic polyp detection by using a model of polyp appearance in the context of the analysis of colonoscopy videos. Our method consists of three stages: region segmentation, region description and region classification. The performance of our region segmentation method guarantees that if a polyp is present in the image, it will be exclusively and totally contained in a single region. The output of the algorithm also defines which regions can be considered as non-informative. We define as our region descriptor the novel Sector Accumulation-Depth of Valleys Accumulation (SA-DOVA), which provides a necessary but not sufficient condition for the polyp presence. Finally, we classify our segmented regions according to the maximal values of the SA-DOVA descriptor. Our preliminary classification results are promising, especially when classifying those parts of the image that do not contain a polyp inside.
	Address
	Corporate Author				Thesis
	Publisher	Elsevier	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0031-3203	ISBN		Medium
	Area	800	Expedition		Conference	IbPRIA
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ BSV2012; IAM @ iam			Serial	1997
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	Author	Santiago Segui; Michal Drozdzal; Fernando Vilariño; Carolina Malagelada; Fernando Azpiroz; Petia Radeva; Jordi Vitria
	Title	Categorization and Segmentation of Intestinal Content Frames for Wireless Capsule Endoscopy			Type	Journal Article
	Year	2012	Publication	IEEE Transactions on Information Technology in Biomedicine	Abbreviated Journal	TITB
	Volume	16	Issue	6	Pages	1341-1352
	Keywords
	Abstract	Wireless capsule endoscopy (WCE) is a device that allows the direct visualization of gastrointestinal tract with minimal discomfort for the patient, but at the price of a large amount of time for screening. In order to reduce this time, several works have proposed to automatically remove all the frames showing intestinal content. These methods label frames as {intestinal content – clear} without discriminating between types of content (with different physiological meaning) or the portion of image covered. In addition, since the presence of intestinal content has been identified as an indicator of intestinal motility, its accurate quantification can show a potential clinical relevance. In this paper, we present a method for the robust detection and segmentation of intestinal content in WCE images, together with its further discrimination between turbid liquid and bubbles. Our proposal is based on a twofold system. First, frames presenting intestinal content are detected by a support vector machine classifier using color and textural information. Second, intestinal content frames are segmented into {turbid, bubbles, and clear} regions. We show a detailed validation using a large dataset. Our system outperforms previous methods and, for the first time, discriminates between turbid from bubbles media.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1089-7771	ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MILAB; MV; OR;SIAI			Approved	no
	Call Number	Admin @ si @ SDV2012			Serial	2124
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	Author	Joan M. Nuñez; Debora Gil; Fernando Vilariño
	Title	Finger joint characterization from X-ray images for rheymatoid arthritis assessment			Type	Conference Article
	Year	2013	Publication	6th International Conference on Biomedical Electronics and Devices	Abbreviated Journal
	Volume		Issue		Pages	288-292
	Keywords	Rheumatoid Arthritis; X-Ray; Hand Joint; Sclerosis; Sharp Van der Heijde
	Abstract	In this study we propose amodular systemfor automatic rheumatoid arthritis assessment which provides a joint space width measure. A hand joint model is proposed based on the accurate analysis of a X-ray finger joint image sample set. This model shows that the sclerosis and the lower bone are the main necessary features in order to perform a proper finger joint characterization. We propose sclerosis and lower bone detection methods as well as the experimental setup necessary for its performance assessment. Our characterization is used to propose and compute a joint space width score which is shown to be related to the different degrees of arthritis. This assertion is verified by comparing our proposed score with Sharp Van der Heijde score, confirming that the lower our score is the more advanced is the patient affection.
	Address	Barcelona; February 2013
	Corporate Author				Thesis
	Publisher	SciTePress	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	BIODEVICES
	Notes	IAM;MV; 600.057; 600.054;SIAI			Approved	no
	Call Number	IAM @ iam @ NGV2013			Serial	2196
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	Author	Joan M. Nuñez; Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Blood Vessel Characterization in Colonoscopy Images to Improve Polyp Localization			Type	Conference Article
	Year	2013	Publication	Proceedings of the International Conference on Computer Vision Theory and Applications	Abbreviated Journal
	Volume	1	Issue		Pages	162-171
	Keywords	Colonoscopy; Blood vessel; Linear features; Valley detection
	Abstract	This paper presents an approach to mitigate the contribution of blood vessels to the energy image used at different tasks of automatic colonoscopy image analysis. This goal is achieved by introducing a characterization of endoluminal scene objects which allows us to differentiate between the trace of 2-dimensional visual objects,such as vessels, and shades from 3-dimensional visual objects, such as folds. The proposed characterization is based on the influence that the object shape has in the resulting visual feature, and it leads to the development of a blood vessel attenuation algorithm. A database consisting of manually labelled masks was built in order to test the performance of our method, which shows an encouraging success in blood vessel mitigation while keeping other structures intact. Moreover, by extending our method to the only available polyp localization algorithm tested on a public database, blood vessel mitigation proved to have a positive influence on the overall performance.
	Address	Barcelona; February 2013
	Corporate Author				Thesis
	Publisher	SciTePress	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	VISIGRAPP
	Notes	MV; 600.054; 600.057;SIAI			Approved	no
	Call Number	IAM @ iam @ NBS2013			Serial	2198
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	Author	Fernando Vilariño; Stephan Ameling; Gerard Lacey; Stephen Patchett; Hugh Mulcahy
	Title	Eye Tracking Search Patterns in Expert and Trainee Colonoscopists: A Novel Method of Assessing Endoscopic Competency?			Type	Journal Article
	Year	2009	Publication	Gastrointestinal Endoscopy	Abbreviated Journal	GI
	Volume	69	Issue	5	Pages	370
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	fernando @ fernando @			Serial	2420
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	Author	Rozenn Dhayot; Fernando Vilariño; Gerard Lacey
	Title	Improving the Quality of Color Colonoscopy Videos			Type	Journal Article
	Year	2008	Publication	EURASIP Journal on Image and Video Processing	Abbreviated Journal	EURASIP JIVP
	Volume	139429	Issue	1	Pages	1-9
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	fernando @ fernando @			Serial	2422
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	Author	Stefan Ameling; Stephan Wirth; Dietrich Paulus; Gerard Lacey; Fernando Vilariño
	Title	Texture-based Polyp Detection in Colonoscopy			Type	Journal Article
	Year	2009	Publication	Proc. BILDVERARBEITUNG FÜR DIE MEDIZIN	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	fernando @ fernando @			Serial	2428
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	Author	Fernando Vilariño; Gerard Lacey
	Title	QUALITY ASSESSMENT IN COLONOSCOPY New challenges through computer vision-based systems			Type	Conference Article
	Year	2009	Publication	in Proc. 3rd International Conference on Biomedical Electronics and Devices	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	fernando @ fernando @			Serial	2430
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	Author	Fernando Vilariño; Gerard Lacey; Jiang Zhou; Hugh Mulcahy; Stephen Patchett
	Title	Automatic Labeling of Colonoscopy Video for Cancer Detection			Type	Conference Article
	Year	2007	Publication	In Proc. berian Conference, IbPRIA	Abbreviated Journal
	Volume		Issue		Pages	290-297
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	fernando @ fernando @			Serial	2431
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	Author	Onur Ferhat; Fernando Vilariño; F. Javier Sanchez
	Title	A cheap portable eye-tracker solution for common setups.			Type	Journal Article
	Year	2014	Publication	Journal of Eye Movement Research	Abbreviated Journal	JEMR
	Volume	7	Issue	3	Pages	1-10
	Keywords
	Abstract	We analyze the feasibility of a cheap eye-tracker where the hardware consists of a single webcam and a Raspberry Pi device. Our aim is to discover the limits of such a system and to see whether it provides an acceptable performance. We base our work on the open source Opengazer (Zielinski, 2013) and we propose several improvements to create a robust, real-time system which can work on a computer with 30Hz sampling rate. After assessing the accuracy of our eye-tracker in elaborated experiments involving 12 subjects under 4 different system setups, we install it on a Raspberry Pi to create a portable stand-alone eye-tracker which achieves 1.42° horizontal accuracy with 3Hz refresh rate for a building cost of 70 Euros.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	;SIAI			Approved	no
	Call Number	Admin @ si @ FVS2014			Serial	2435
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	Author	Jorge Bernal; Fernando Vilariño; F. Javier Sanchez; M. Arnold; Anarta Ghosh; Gerard Lacey
	Title	Experts vs Novices: Applying Eye-tracking Methodologies in Colonoscopy Video Screening for Polyp Search			Type	Conference Article
	Year	2014	Publication	2014 Symposium on Eye Tracking Research and Applications	Abbreviated Journal
	Volume		Issue		Pages	223-226
	Keywords
	Abstract	We present in this paper a novel study aiming at identifying the differences in visual search patterns between physicians of diverse levels of expertise during the screening of colonoscopy videos. Physicians were clustered into two groups -experts and novices- according to the number of procedures performed, and fixations were captured by an eye-tracker device during the task of polyp search in different video sequences. These fixations were integrated into heat maps, one for each cluster. The obtained maps were validated over a ground truth consisting of a mask of the polyp, and the comparison between experts and novices was performed by using metrics such as reaction time, dwelling time and energy concentration ratio. Experimental results show a statistically significant difference between experts and novices, and the obtained maps show to be a useful tool for the characterisation of the behaviour of each group.
	Address	USA; March 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-1-4503-2751-0	Medium
	Area		Expedition		Conference	ETRA
	Notes	MV; 600.047; 600.060;SIAI			Approved	no
	Call Number	Admin @ si @ BVS2014			Serial	2448
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	Author	Jorge Bernal; Joan M. Nuñez; F. Javier Sanchez; Fernando Vilariño
	Title	Polyp Segmentation Method in Colonoscopy Videos by means of MSA-DOVA Energy Maps Calculation			Type	Conference Article
	Year	2014	Publication	3rd MICCAI Workshop on Clinical Image-based Procedures: Translational Research in Medical Imaging	Abbreviated Journal
	Volume	8680	Issue		Pages	41-49
	Keywords	Image segmentation; Polyps; Colonoscopy; Valley information; Energy maps
	Abstract	In this paper we present a novel polyp region segmentation method for colonoscopy videos. Our method uses valley information associated to polyp boundaries in order to provide an initial segmentation. This first segmentation is refined to eliminate boundary discontinuities caused by image artifacts or other elements of the scene. Experimental results over a publicly annotated database show that our method outperforms both general and specific segmentation methods by providing more accurate regions rich in polyp content. We also prove how image preprocessing is needed to improve final polyp region segmentation.
	Address	Boston; USA; September 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CLIP
	Notes	MV; 600.060; 600.044; 600.047;SIAI			Approved	no
	Call Number	Admin @ si @ BNS2014			Serial	2502
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	Author	Joan M. Nuñez; Jorge Bernal; Miquel Ferrer; Fernando Vilariño
	Title	Impact of Keypoint Detection on Graph-based Characterization of Blood Vessels in Colonoscopy Videos			Type	Conference Article
	Year	2014	Publication	CARE workshop	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Colonoscopy; Graph Matching; Biometrics; Vessel; Intersection
	Abstract	We explore the potential of the use of blood vessels as anatomical landmarks for developing image registration methods in colonoscopy images. An unequivocal representation of blood vessels could be used to guide follow-up methods to track lesions over different interventions. We propose a graph-based representation to characterize network structures, such as blood vessels, based on the use of intersections and endpoints. We present a study consisting of the assessment of the minimal performance a keypoint detector should achieve so that the structure can still be recognized. Experimental results prove that, even by achieving a loss of 35% of the keypoints, the descriptive power of the associated graphs to the vessel pattern is still high enough to recognize blood vessels.
	Address	Boston; USA; September 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CARE
	Notes	MV; DAG; 600.060; 600.047; 600.077;SIAI			Approved	no
	Call Number	Admin @ si @ NBF2014			Serial	2504
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	Author	Jorge Bernal; F. Javier Sanchez; Gloria Fernandez Esparrach; Debora Gil; Cristina Rodriguez de Miguel; Fernando Vilariño
	Title	WM-DOVA Maps for Accurate Polyp Highlighting in Colonoscopy: Validation vs. Saliency Maps from Physicians			Type	Journal Article
	Year	2015	Publication	Computerized Medical Imaging and Graphics	Abbreviated Journal	CMIG
	Volume	43	Issue		Pages	99-111
	Keywords	Polyp localization; Energy Maps; Colonoscopy; Saliency; Valley detection
	Abstract	We introduce in this paper a novel polyp localization method for colonoscopy videos. Our method is based on a model of appearance for polyps which defines polyp boundaries in terms of valley information. We propose the integration of valley information in a robust way fostering complete, concave and continuous boundaries typically associated to polyps. This integration is done by using a window of radial sectors which accumulate valley information to create WMDOVA1 energy maps related with the likelihood of polyp presence. We perform a double validation of our maps, which include the introduction of two new databases, including the first, up to our knowledge, fully annotated database with clinical metadata associated. First we assess that the highest value corresponds with the location of the polyp in the image. Second, we show that WM-DOVA energy maps can be comparable with saliency maps obtained from physicians' fixations obtained via an eye-tracker. Finally, we prove that our method outperforms state-of-the-art computational saliency results. Our method shows good performance, particularly for small polyps which are reported to be the main sources of polyp miss-rate, which indicates the potential applicability of our method in clinical practice.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0895-6111	ISBN		Medium
	Area		Expedition		Conference
	Notes	MV; IAM; 600.047; 600.060; 600.075;SIAI			Approved	no
	Call Number	Admin @ si @ BSF2015			Serial	2609
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	Author	Onur Ferhat; Arcadi Llanza; Fernando Vilariño
	Title	A Feature-Based Gaze Estimation Algorithm for Natural Light Scenarios			Type	Conference Article
	Year	2015	Publication	Pattern Recognition and Image Analysis, Proceedings of 7th Iberian Conference , ibPRIA 2015	Abbreviated Journal
	Volume	9117	Issue		Pages	569-576
	Keywords	Eye tracking; Gaze estimation; Natural light; Webcam
	Abstract	We present an eye tracking system that works with regular webcams. We base our work on open source CVC Eye Tracker [7] and we propose a number of improvements and a novel gaze estimation method. The new method uses features extracted from iris segmentation and it does not fall into the traditional categorization of appearance–based/model–based methods. Our experiments show that our approach reduces the gaze estimation errors by 34 % in the horizontal direction and by 12 % in the vertical direction compared to the baseline system.
	Address	Santiago de Compostela; June 2015
	Corporate Author				Thesis
	Publisher	Springer International Publishing	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-319-19389-2	Medium
	Area		Expedition		Conference	IbPRIA
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ FLV2015a			Serial	2646
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	Author	Onur Ferhat; Arcadi Llanza; Fernando Vilariño
	Title	Gaze interaction for multi-display systems using natural light eye-tracker			Type	Conference Article
	Year	2015	Publication	2nd International Workshop on Solutions for Automatic Gaze Data Analysis	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Bielefeld; Germany; September 2015
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	SAGA
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ FLV2015b			Serial	2676
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	Author	Carlos David Martinez Hinarejos; Josep Llados; Alicia Fornes; Francisco Casacuberta; Lluis de Las Heras; Joan Mas; Moises Pastor; Oriol Ramos Terrades; Joan Andreu Sanchez; Enrique Vidal; Fernando Vilariño
	Title	Context, multimodality, and user collaboration in handwritten text processing: the CoMUN-HaT project			Type	Conference Article
	Year	2016	Publication	3rd IberSPEECH	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Processing of handwritten documents is a task that is of wide interest for many purposes, such as those related to preserve cultural heritage. Handwritten text recognition techniques have been successfully applied during the last decade to obtain transcriptions of handwritten documents, and keyword spotting techniques have been applied for searching specific terms in image collections of handwritten documents. However, results on transcription and indexing are far from perfect. In this framework, the use of new data sources arises as a new paradigm that will allow for a better transcription and indexing of handwritten documents. Three main different data sources could be considered: context of the document (style, writer, historical time, topics,. . . ), multimodal data (representations of the document in a different modality, such as the speech signal of the dictation of the text), and user feedback (corrections, amendments,. . . ). The CoMUN-HaT project aims at the integration of these different data sources into the transcription and indexing task for handwritten documents: the use of context derived from the analysis of the documents, how multimodality can aid the recognition process to obtain more accurate transcriptions (including transcription in a modern version of the language), and integration into a userin-the-loop assisted text transcription framework. This will be reflected in the construction of a transcription and indexing platform that can be used by both professional and nonprofessional users, contributing to crowd-sourcing activities to preserve cultural heritage and to obtain an accessible version of the involved corpus.
	Address	Lisboa; Portugal; November 2016
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IberSPEECH
	Notes	DAG; MV; 600.097;SIAI			Approved	no
	Call Number	Admin @ si @MLF2016			Serial	2813
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	Author	Gloria Fernandez Esparrach; Jorge Bernal; Cristina Rodriguez de Miguel; Debora Gil; Fernando Vilariño; Henry Cordova; Cristina Sanchez Montes; I.Araujo ; Maria Lopez Ceron; J.Llach; F. Javier Sanchez
	Title	Colonic polyps are correctly identified by a computer vision method using wm-dova energy maps			Type	Conference Article
	Year	2015	Publication	Proceedings of 23 United European- UEG Week 2015	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	UEG
	Notes	MV; IAM; 600.075;SIAI			Approved	no
	Call Number	Admin @ si @ FBR2015			Serial	2732
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	Author	Onur Ferhat; Fernando Vilariño
	Title	Low Cost Eye Tracking: The Current Panorama			Type	Journal Article
	Year	2016	Publication	Computational Intelligence and Neuroscience	Abbreviated Journal	CIN
	Volume		Issue		Pages	Article ID 8680541
	Keywords
	Abstract	Despite the availability of accurate, commercial gaze tracker devices working with infrared (IR) technology, visible light gaze tracking constitutes an interesting alternative by allowing scalability and removing hardware requirements. Over the last years, this field has seen examples of research showing performance comparable to the IR alternatives. In this work, we survey the previous work on remote, visible light gaze trackers and analyze the explored techniques from various perspectives such as calibration strategies, head pose invariance, and gaze estimation techniques. We also provide information on related aspects of research such as public datasets to test against, open source projects to build upon, and gaze tracking services to directly use in applications. With all this information, we aim to provide the contemporary and future researchers with a map detailing previously explored ideas and the required tools.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MV; 605.103; 600.047; 600.097;SIAI			Approved	no
	Call Number	Admin @ si @ FeV2016			Serial	2744
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	Author	Joan M. Nuñez; Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Growing Algorithm for Intersection Detection (GRAID) in branching patterns			Type	Journal Article
	Year	2015	Publication	Machine Vision and Applications	Abbreviated Journal	MVAP
	Volume	26	Issue	2	Pages	387-400
	Keywords	Bifurcation ; Crossroad; Intersection ;Retina ; Vessel
	Abstract	Analysis of branching structures represents a very important task in fields such as medical diagnosis, road detection or biometrics. Detecting intersection landmarks Becomes crucial when capturing the structure of a branching pattern. We present a very simple geometrical model to describe intersections in branching structures based on two conditions: Bounded Tangency condition (BT) and Shortest Branch (SB) condition. The proposed model precisely sets a geometrical characterization of intersections and allows us to introduce a new unsupervised operator for intersection extraction. We propose an implementation that handles the consequences of digital domain operation that,unlike existing approaches, is not restricted to a particular scale and does not require the computation of the thinned pattern. The new proposal, as well as other existing approaches in the bibliography, are evaluated in a common framework for the first time. The performance analysis is based on two manually segmented image data sets: DRIVE retinal image database and COLON-VESSEL data set, a newly created data set of vascular content in colonoscopy frames. We have created an intersection landmark ground truth for each data set besides comparing our method in the only existing ground truth. Quantitative results confirm that we are able to outperform state-of-the-art performancelevels with the advantage that neither training nor parameter tuning is needed.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	;SIAI			Approved	no
	Call Number	Admin @ si @MBS2015			Serial	2777
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	Author	Gloria Fernandez Esparrach; Jorge Bernal; Cristina Rodriguez de Miguel; Debora Gil; Fernando Vilariño; Henry Cordova; Cristina Sanchez Montes; Isis Ara
	Title	Utilidad de la visión por computador para la localización de pólipos pequeños y planos			Type	Conference Article
	Year	2016	Publication	XIX Reunión Nacional de la Asociación Española de Gastroenterología, Gastroenterology Hepatology	Abbreviated Journal
	Volume	39	Issue	2	Pages	94
	Keywords
	Abstract
	Address	Madrid (Spain)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	AEGASTRO
	Notes	MV; IAM; 600.097;SIAI			Approved	no
	Call Number	Admin @ si @FBR2016			Serial	2779
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	Author	Dan Norton; Fernando Vilariño; Onur Ferhat
	Title	Memory Field – Creative Engagement in Digital Collections			Type	Conference Article
	Year	2015	Publication	Internet Librarian International Conference	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	“Memory Fields” is a trans-disciplinary project aiming at the (re)valorisation of digital collections.Its main deliverable is an interface for a dual screen installation, used to access and mix the public library digital collections. The collections being used in this case are a collection of digitised posters from the Spanish Civil War, belonging to the Arxiu General de Catalunya, and a collection of field recordings made by Dan Norton. The system generates visualisations, and the images and sounds are mixed together using narrative primitives of video dj. Users contribute to the digital collections by adding personal memories and observations. The comments and recollections appear as flowers growing in a “memory field” and memories remain public in a Twitter feed (@Memoryfields).
	Address	London; UK; October 2015
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ILI
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @NVF2015			Serial	2796
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	Author	Fernando Vilariño; Dimosthenis Karatzas
	Title	The Library Living Lab			Type	Conference Article
	Year	2015	Publication	Open Living Lab Days	Abbreviated Journal
	Volume		Issue		Pages
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	Abstract
	Address	Istanbul; Turkey; August 2015
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	OLLD
	Notes	MV; DAG;SIAI			Approved	no
	Call Number	Admin @ si @ViK2015			Serial	2797
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	Author	Fernando Vilariño; Dimosthenis Karatzas; Marcos Catalan; Alberto Valcarcel
	Title	An horizon for the Public Library as a place for innovation and creativity. The Library Living Lab in Volpelleres			Type	Book Chapter
	Year	2015	Publication	The White Book on Public Library Network from Diputació de Barcelona	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MV; DAG;SIAI			Approved	no
	Call Number	Admin @ si @VKC2015			Serial	2798
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	Author	Fernando Vilariño
	Title	Computer Vision and Performing Arts			Type	Conference Article
	Year	2015	Publication	Korean Scholars of Marketing Science	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Seoul; Korea; October 2015
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	KAMS
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @Vil2015			Serial	2799
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	Author	Fernando Vilariño; Dan Norton; Onur Ferhat
	Title	Memory Fields: DJs in the Library			Type	Conference Article
	Year	2015	Publication	21 st Symposium of Electronic Arts	Abbreviated Journal
	Volume		Issue		Pages
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	Abstract
	Address	Vancouver; Canada; August 2015
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ISEA
	Notes	;SIAI			Approved	no
	Call Number	Admin @ si @VNF2015			Serial	2800
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	Author	Fernando Vilariño; Dan Norton; Onur Ferhat
	Title	The Eye Doesn't Click – Eyetracking and Digital Content Interaction			Type	Conference Article
	Year	2016	Publication	4S/EASST Conference	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Barcelona; Spain; September 2016
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	EASST
	Notes	MV; 600.097;SIAI			Approved	no
	Call Number	Admin @ si @VNF2016			Serial	2801
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