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	Author	Pau Riba; Josep Llados; Alicia Fornes
	Title	Hierarchical graphs for coarse-to-fine error tolerant matching			Type	Journal Article
	Year	2020	Publication	Pattern Recognition Letters	Abbreviated Journal	PRL
	Volume	134	Issue		Pages	116-124
	Keywords	Hierarchical graph representation; Coarse-to-fine graph matching; Graph-based retrieval
	Abstract	During the last years, graph-based representations are experiencing a growing usage in visual recognition and retrieval due to their ability to capture both structural and appearance-based information. Thus, they provide a greater representational power than classical statistical frameworks. However, graph-based representations leads to high computational complexities usually dealt by graph embeddings or approximated matching techniques. Despite their representational power, they are very sensitive to noise and small variations of the input image. With the aim to cope with the time complexity and the variability present in the generated graphs, in this paper we propose to construct a novel hierarchical graph representation. Graph clustering techniques adapted from social media analysis have been used in order to contract a graph at different abstraction levels while keeping information about the topology. Abstract nodes attributes summarise information about the contracted graph partition. For the proposed representations, a coarse-to-fine matching technique is defined. Hence, small graphs are used as a filtering before more accurate matching methods are applied. This approach has been validated in real scenarios such as classification of colour images or retrieval of handwritten words (i.e. word spotting).
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.097; 601.302; 603.057; 600.140; 600.121			Approved	no
	Call Number	Admin @ si @ RLF2020			Serial	3349
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	Author	Jialuo Chen; M.A.Souibgui; Alicia Fornes; Beata Megyesi
	Title	A Web-based Interactive Transcription Tool for Encrypted Manuscripts			Type	Conference Article
	Year	2020	Publication	3rd International Conference on Historical Cryptology	Abbreviated Journal
	Volume		Issue		Pages	52-59
	Keywords
	Abstract	Manual transcription of handwritten text is a time consuming task. In the case of encrypted manuscripts, the recognition is even more complex due to the huge variety of alphabets and symbol sets. To speed up and ease this process, we present a web-based tool aimed to (semi)-automatically transcribe the encrypted sources. The user uploads one or several images of the desired encrypted document(s) as input, and the system returns the transcription(s). This process is carried out in an interactive fashion with the user to obtain more accurate results. For discovering and testing, the developed web tool is freely available.
	Address	Virtual; June 2020
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	HistoCrypt
	Notes	DAG; 600.140; 602.230; 600.121			Approved	no
	Call Number	Admin @ si @ CSF2020			Serial	3447
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	Author	Veronica Romero; Emilio Granell; Alicia Fornes; Enrique Vidal; Joan Andreu Sanchez
	Title	Information Extraction in Handwritten Marriage Licenses Books			Type	Conference Article
	Year	2019	Publication	5th International Workshop on Historical Document Imaging and Processing	Abbreviated Journal
	Volume		Issue		Pages	66-71
	Keywords
	Abstract	Handwritten marriage licenses books are characterized by a simple structure of the text in the records with an evolutionary vocabulary, mainly composed of proper names that change along the time. This distinct vocabulary makes automatic transcription and semantic information extraction difficult tasks. Previous works have shown that the use of category-based language models and a Grammatical Inference technique known as MGGI can improve the accuracy of these tasks. However, the application of the MGGI algorithm requires an a priori knowledge to label the words of the training strings, that is not always easy to obtain. In this paper we study how to automatically obtain the information required by the MGGI algorithm using a technique based on Confusion Networks. Using the resulting language model, full handwritten text recognition and information extraction experiments have been carried out with results supporting the proposed approach.
	Address	Sydney; Australia; September 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	HIP
	Notes	DAG; 600.140; 600.121			Approved	no
	Call Number	Admin @ si @ RGF2019			Serial	3352
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	Author	Manuel Carbonell; Joan Mas; Mauricio Villegas; Alicia Fornes; Josep Llados
	Title	End-to-End Handwritten Text Detection and Transcription in Full Pages			Type	Conference Article
	Year	2019	Publication	2nd International Workshop on Machine Learning	Abbreviated Journal
	Volume	5	Issue		Pages	29-34
	Keywords	Handwritten Text Recognition; Layout Analysis; Text segmentation; Deep Neural Networks; Multi-task learning
	Abstract	When transcribing handwritten document images, inaccuracies in the text segmentation step often cause errors in the subsequent transcription step. For this reason, some recent methods propose to perform the recognition at paragraph level. But still, errors in the segmentation of paragraphs can affect the transcription performance. In this work, we propose an end-to-end framework to transcribe full pages. The joint text detection and transcription allows to remove the layout analysis requirement at test time. The experimental results show that our approach can achieve comparable results to models that assume segmented paragraphs, and suggest that joining the two tasks brings an improvement over doing the two tasks separately.
	Address	Sydney; Australia; September 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICDAR WML
	Notes	DAG; 600.140; 601.311; 600.140			Approved	no
	Call Number	Admin @ si @ CMV2019			Serial	3353
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	Author	Asma Bensalah; Pau Riba; Alicia Fornes; Josep Llados
	Title	Shoot less and Sketch more: An Efficient Sketch Classification via Joining Graph Neural Networks and Few-shot Learning			Type	Conference Article
	Year	2019	Publication	13th IAPR International Workshop on Graphics Recognition	Abbreviated Journal
	Volume		Issue		Pages	80-85
	Keywords	Sketch classification; Convolutional Neural Network; Graph Neural Network; Few-shot learning
	Abstract	With the emergence of the touchpad devices and drawing tablets, a new era of sketching started afresh. However, the recognition of sketches is still a tough task due to the variability of the drawing styles. Moreover, in some application scenarios there is few labelled data available for training, which imposes a limitation for deep learning architectures. In addition, in many cases there is a need to generate models able to adapt to new classes. In order to cope with these limitations, we propose a method based on few-shot learning and graph neural networks for classifying sketches aiming for an efficient neural model. We test our approach with several databases of sketches, showing promising results.
	Address	Sydney; Australia; September 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	GREC
	Notes	DAG; 600.140; 601.302; 600.121			Approved	no
	Call Number	Admin @ si @ BRF2019			Serial	3354
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	Author	Pau Riba; Anjan Dutta; Lutz Goldmann; Alicia Fornes; Oriol Ramos Terrades; Josep Llados
	Title	Table Detection in Invoice Documents by Graph Neural Networks			Type	Conference Article
	Year	2019	Publication	15th International Conference on Document Analysis and Recognition	Abbreviated Journal
	Volume		Issue		Pages	122-127
	Keywords
	Abstract	Tabular structures in documents offer a complementary dimension to the raw textual data, representing logical or quantitative relationships among pieces of information. In digital mail room applications, where a large amount of administrative documents must be processed with reasonable accuracy, the detection and interpretation of tables is crucial. Table recognition has gained interest in document image analysis, in particular in unconstrained formats (absence of rule lines, unknown information of rows and columns). In this work, we propose a graph-based approach for detecting tables in document images. Instead of using the raw content (recognized text), we make use of the location, context and content type, thus it is purely a structure perception approach, not dependent on the language and the quality of the text reading. Our framework makes use of Graph Neural Networks (GNNs) in order to describe the local repetitive structural information of tables in invoice documents. Our proposed model has been experimentally validated in two invoice datasets and achieved encouraging results. Additionally, due to the scarcity of benchmark datasets for this task, we have contributed to the community a novel dataset derived from the RVL-CDIP invoice data. It will be publicly released to facilitate future research.
	Address	Sydney; Australia; September 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICDAR
	Notes	DAG; 600.140; 601.302; 602.167; 600.121; 600.141			Approved	no
	Call Number	Admin @ si @ RDG2019			Serial	3355
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	Author	Ekta Vats; Anders Hast; Alicia Fornes
	Title	Training-Free and Segmentation-Free Word Spotting using Feature Matching and Query Expansion			Type	Conference Article
	Year	2019	Publication	15th International Conference on Document Analysis and Recognition	Abbreviated Journal
	Volume		Issue		Pages	1294-1299
	Keywords	Word spotting; Segmentation-free; Trainingfree; Query expansion; Feature matching
	Abstract	Historical handwritten text recognition is an interesting yet challenging problem. In recent times, deep learning based methods have achieved significant performance in handwritten text recognition. However, handwriting recognition using deep learning needs training data, and often, text must be previously segmented into lines (or even words). These limitations constrain the application of HTR techniques in document collections, because training data or segmented words are not always available. Therefore, this paper proposes a training-free and segmentation-free word spotting approach that can be applied in unconstrained scenarios. The proposed word spotting framework is based on document query word expansion and relaxed feature matching algorithm, which can easily be parallelised. Since handwritten words posses distinct shape and characteristics, this work uses a combination of different keypoint detectors and Fourier-based descriptors to obtain a sufficient degree of relaxed matching. The effectiveness of the proposed method is empirically evaluated on well-known benchmark datasets using standard evaluation measures. The use of informative features along with query expansion significantly contributed in efficient performance of the proposed method.
	Address	Sydney; Australia; September 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICDAR
	Notes	DAG; 600.140; 600.121			Approved	no
	Call Number	Admin @ si @ VHF2019			Serial	3356
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	Author	Debora Gil; Carles Sanchez; Agnes Borras; Marta Diez-Ferrer; Antoni Rosell
	Title	Segmentation of Distal Airways using Structural Analysis			Type	Journal Article
	Year	2019	Publication	PloS one	Abbreviated Journal	Plos
	Volume	14	Issue	12	Pages
	Keywords
	Abstract	Segmentation of airways in Computed Tomography (CT) scans is a must for accurate support of diagnosis and intervention of many pulmonary disorders. In particular, lung cancer diagnosis would benefit from segmentations reaching most distal airways. We present a method that combines descriptors of bronchi local appearance and graph global structural analysis to fine-tune thresholds on the descriptors adapted for each bronchial level. We have compared our method to the top performers of the EXACT09 challenge and to a commercial software for biopsy planning evaluated in an own-collected data-base of high resolution CT scans acquired under different breathing conditions. Results on EXACT09 data show that our method provides a high leakage reduction with minimum loss in airway detection. Results on our data-base show the reliability across varying breathing conditions and a competitive performance for biopsy planning compared to a commercial solution.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.139; 600.145			Approved	no
	Call Number	Admin @ si @ GSB2019			Serial	3357
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	Author	Marta Ligero; Guillermo Torres; Carles Sanchez; Katerine Diaz; Raquel Perez; Debora Gil
	Title	Selection of Radiomics Features based on their Reproducibility			Type	Conference Article
	Year	2019	Publication	41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society	Abbreviated Journal
	Volume		Issue		Pages	403-408
	Keywords
	Abstract	Dimensionality reduction is key to alleviate machine learning artifacts in clinical applications with Small Sample Size (SSS) unbalanced datasets. Existing methods rely on either the probabilistic distribution of training data or the discriminant power of the reduced space, disregarding the impact of repeatability and uncertainty in features.In the present study is proposed the use of reproducibility of radiomics features to select features with high inter-class correlation coefficient (ICC). The reproducibility includes the variability introduced in the image acquisition, like medical scans acquisition parameters and convolution kernels, that affects intensity-based features and tumor annotations made by physicians, that influences morphological descriptors of the lesion.For the reproducibility of radiomics features three studies were conducted on cases collected at Vall Hebron Oncology Institute (VHIO) on responders to oncology treatment. The studies focused on the variability due to the convolution kernel, image acquisition parameters, and the inter-observer lesion identification. The features selected were those features with a ICC higher than 0.7 in the three studies.The selected features based on reproducibility were evaluated for lesion malignancy classification using a different database. Results show better performance compared to several state-of-the-art methods including Principal Component Analysis (PCA), Kernel Discriminant Analysis via QR decomposition (KDAQR), LASSO, and an own built Convolutional Neural Network.
	Address	Berlin; Alemanya; July 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	EMBC
	Notes	IAM; 600.139; 600.145			Approved	no
	Call Number	Admin @ si @ LTS2019			Serial	3358
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	Author	Debora Gil; Antonio Esteban Lansaque; Sebastian Stefaniga; Mihail Gaianu; Carles Sanchez
	Title	Data Augmentation from Sketch			Type	Conference Article
	Year	2019	Publication	International Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging	Abbreviated Journal
	Volume	11840	Issue		Pages	155-162
	Keywords	Data augmentation; cycleGANs; Multi-objective optimization
	Abstract	State of the art machine learning methods need huge amounts of data with unambiguous annotations for their training. In the context of medical imaging this is, in general, a very difficult task due to limited access to clinical data, the time required for manual annotations and variability across experts. Simulated data could serve for data augmentation provided that its appearance was comparable to the actual appearance of intra-operative acquisitions. Generative Adversarial Networks (GANs) are a powerful tool for artistic style transfer, but lack a criteria for selecting epochs ensuring also preservation of intra-operative content. We propose a multi-objective optimization strategy for a selection of cycleGAN epochs ensuring a mapping between virtual images and the intra-operative domain preserving anatomical content. Our approach has been applied to simulate intra-operative bronchoscopic videos and chest CT scans from virtual sketches generated using simple graphical primitives.
	Address	Shenzhen; China; October 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CLIP
	Notes	IAM; 600.145; 601.337; 600.139; 600.145			Approved	no
	Call Number	Admin @ si @ GES2019			Serial	3359
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	Author	Carles Sanchez; Miguel Viñas; Coen Antens; Agnes Borras; Debora Gil
	Title	Back to Front Architecture for Diagnosis as a Service			Type	Conference Article
	Year	2018	Publication	20th International Symposium on Symbolic and Numeric Algorithms for Scientific Computing	Abbreviated Journal
	Volume		Issue		Pages	343-346
	Keywords
	Abstract	Software as a Service (SaaS) is a cloud computing model in which a provider hosts applications in a server that customers use via internet. Since SaaS does not require to install applications on customers' own computers, it allows the use by multiple users of highly specialized software without extra expenses for hardware acquisition or licensing. A SaaS tailored for clinical needs not only would alleviate licensing costs, but also would facilitate easy access to new methods for diagnosis assistance. This paper presents a SaaS client-server architecture for Diagnosis as a Service (DaaS). The server is based on docker technology in order to allow execution of softwares implemented in different languages with the highest portability and scalability. The client is a content management system allowing the design of websites with multimedia content and interactive visualization of results allowing user editing. We explain a usage case that uses our DaaS as crowdsourcing platform in a multicentric pilot study carried out to evaluate the clinical benefits of a software for assessment of central airway obstruction.
	Address	Timisoara; Rumania; September 2018
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	SYNASC
	Notes	IAM; 600.145			Approved	no
	Call Number	Admin @ si @ SVA2018			Serial	3360
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	Author	Debora Gil; Antoni Rosell
	Title	Advances in Artificial Intelligence – How Lung Cancer CT Screening Will Progress?			Type	Abstract
	Year	2019	Publication	World Lung Cancer Conference	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Invited speaker
	Address	Barcelona; September 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IASLC WCLC
	Notes	IAM; 600.139; 600.145			Approved	no
	Call Number	Admin @ si @ GiR2019			Serial	3361
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	Author	Rada Deeb; Joost Van de Weijer; Damien Muselet; Mathieu Hebert; Alain Tremeau
	Title	Deep spectral reflectance and illuminant estimation from self-interreflections			Type	Journal Article
	Year	2019	Publication	Journal of the Optical Society of America A	Abbreviated Journal	JOSA A
	Volume	31	Issue	1	Pages	105-114
	Keywords
	Abstract	In this work, we propose a convolutional neural network based approach to estimate the spectral reflectance of a surface and spectral power distribution of light from a single RGB image of a V-shaped surface. Interreflections happening in a concave surface lead to gradients of RGB values over its area. These gradients carry a lot of information concerning the physical properties of the surface and the illuminant. Our network is trained with only simulated data constructed using a physics-based interreflection model. Coupling interreflection effects with deep learning helps to retrieve the spectral reflectance under an unknown light and to estimate spectral power distribution of this light as well. In addition, it is more robust to the presence of image noise than classical approaches. Our results show that the proposed approach outperforms state-of-the-art learning-based approaches on simulated data. In addition, it gives better results on real data compared to other interreflection-based approaches.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	LAMP; 600.120			Approved	no
	Call Number	Admin @ si @ DWM2019			Serial	3362
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	Author	Yaxing Wang; Abel Gonzalez-Garcia; Joost Van de Weijer; Luis Herranz
	Title	SDIT: Scalable and Diverse Cross-domain Image Translation			Type	Conference Article
	Year	2019	Publication	27th ACM International Conference on Multimedia	Abbreviated Journal
	Volume		Issue		Pages	1267–1276
	Keywords
	Abstract	Recently, image-to-image translation research has witnessed remarkable progress. Although current approaches successfully generate diverse outputs or perform scalable image transfer, these properties have not been combined into a single method. To address this limitation, we propose SDIT: Scalable and Diverse image-to-image translation. These properties are combined into a single generator. The diversity is determined by a latent variable which is randomly sampled from a normal distribution. The scalability is obtained by conditioning the network on the domain attributes. Additionally, we also exploit an attention mechanism that permits the generator to focus on the domain-specific attribute. We empirically demonstrate the performance of the proposed method on face mapping and other datasets beyond faces.
	Address	Nice; Francia; October 2019
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ACM-MM
	Notes	LAMP; 600.106; 600.109; 600.141; 600.120			Approved	no
	Call Number	Admin @ si @ WGW2019			Serial	3363
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	Author	Arka Ujjal Dey; Suman Ghosh; Ernest Valveny; Gaurav Harit
	Title	Beyond Visual Semantics: Exploring the Role of Scene Text in Image Understanding			Type	Journal Article
	Year	2021	Publication	Pattern Recognition Letters	Abbreviated Journal	PRL
	Volume	149	Issue		Pages	164-171
	Keywords
	Abstract	Images with visual and scene text content are ubiquitous in everyday life. However, current image interpretation systems are mostly limited to using only the visual features, neglecting to leverage the scene text content. In this paper, we propose to jointly use scene text and visual channels for robust semantic interpretation of images. We do not only extract and encode visual and scene text cues, but also model their interplay to generate a contextual joint embedding with richer semantics. The contextual embedding thus generated is applied to retrieval and classification tasks on multimedia images, with scene text content, to demonstrate its effectiveness. In the retrieval framework, we augment our learned text-visual semantic representation with scene text cues, to mitigate vocabulary misses that may have occurred during the semantic embedding. To deal with irrelevant or erroneous recognition of scene text, we also apply query-based attention to our text channel. We show how the multi-channel approach, involving visual semantics and scene text, improves upon state of the art.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.121			Approved	no
	Call Number	Admin @ si @ DGV2021			Serial	3364
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