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Ivet Rafegas; Maria Vanrell |
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Title |
Color spaces emerging from deep convolutional networks |
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Conference Article |
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2016 |
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24th Color and Imaging Conference |
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225-230 |
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Award for the best interactive session
Defining color spaces that provide a good encoding of spatio-chromatic properties of color surfaces is an open problem in color science [8, 22]. Related to this, in computer vision the fusion of color with local image features has been studied and evaluated [16]. In human vision research, the cells which are selective to specific color hues along the visual pathway are also a focus of attention [7, 14]. In line with these research aims, in this paper we study how color is encoded in a deep Convolutional Neural Network (CNN) that has been trained on more than one million natural images for object recognition. These convolutional nets achieve impressive performance in computer vision, and rival the representations in human brain. In this paper we explore how color is represented in a CNN architecture that can give some intuition about efficient spatio-chromatic representations. In convolutional layers the activation of a neuron is related to a spatial filter, that combines spatio-chromatic representations. We use an inverted version of it to explore the properties. Using a series of unsupervised methods we classify different type of neurons depending on the color axes they define and we propose an index of color-selectivity of a neuron. We estimate the main color axes that emerge from this trained net and we prove that colorselectivity of neurons decreases from early to deeper layers. |
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San Diego; USA; November 2016 |
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Admin @ si @ RaV2016a |
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2894 |
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Sumit K. Banchhor; Tadashi Araki; Narendra D. Londhe; Nobutaka Ikeda; Petia Radeva; Ayman El-Baz; Luca Saba; Andrew Nicolaides; Shoaib Shafique; John R. Laird; Jasjit S. Suri |
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Five multiresolution-based calcium volume measurement techniques from coronary IVUS videos: A comparative approach |
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Journal Article |
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2016 |
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Computer Methods and Programs in Biomedicine |
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CMPB |
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134 |
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237-258 |
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BACKGROUND AND OBJECTIVE:
Fast intravascular ultrasound (IVUS) video processing is required for calcium volume computation during the planning phase of percutaneous coronary interventional (PCI) procedures. Nonlinear multiresolution techniques are generally applied to improve the processing time by down-sampling the video frames.
METHODS:
This paper presents four different segmentation methods for calcium volume measurement, namely Threshold-based, Fuzzy c-Means (FCM), K-means, and Hidden Markov Random Field (HMRF) embedded with five different kinds of multiresolution techniques (bilinear, bicubic, wavelet, Lanczos, and Gaussian pyramid). This leads to 20 different kinds of combinations. IVUS image data sets consisting of 38,760 IVUS frames taken from 19 patients were collected using 40 MHz IVUS catheter (Atlantis® SR Pro, Boston Scientific®, pullback speed of 0.5 mm/sec.). The performance of these 20 systems is compared with and without multiresolution using the following metrics: (a) computational time; (b) calcium volume; (c) image quality degradation ratio; and (d) quality assessment ratio.
RESULTS:
Among the four segmentation methods embedded with five kinds of multiresolution techniques, FCM segmentation combined with wavelet-based multiresolution gave the best performance. FCM and wavelet experienced the highest percentage mean improvement in computational time of 77.15% and 74.07%, respectively. Wavelet interpolation experiences the highest mean precision-of-merit (PoM) of 94.06 ± 3.64% and 81.34 ± 16.29% as compared to other multiresolution techniques for volume level and frame level respectively. Wavelet multiresolution technique also experiences the highest Jaccard Index and Dice Similarity of 0.7 and 0.8, respectively. Multiresolution is a nonlinear operation which introduces bias and thus degrades the image. The proposed system also provides a bias correction approach to enrich the system, giving a better mean calcium volume similarity for all the multiresolution-based segmentation methods. After including the bias correction, bicubic interpolation gives the largest increase in mean calcium volume similarity of 4.13% compared to the rest of the multiresolution techniques. The system is automated and can be adapted in clinical settings.
CONCLUSIONS:
We demonstrated the time improvement in calcium volume computation without compromising the quality of IVUS image. Among the 20 different combinations of multiresolution with calcium volume segmentation methods, the FCM embedded with wavelet-based multiresolution gave the best performance. |
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MILAB; |
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Admin @ si @ BAL2016 |
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2830 |
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C. Butakoff; Simone Balocco; F.M. Sukno; C. Hoogendoorn; C. Tobon-Gomez; G. Avegliano; A.F. Frangi |
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Left-ventricular Epi- and Endocardium Extraction from 3D Ultrasound Images Using an Automatically Constructed 3D ASM |
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2016 |
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Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization |
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CMBBE |
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4 |
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5 |
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265-280 |
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ASM; cardiac segmentation; statistical model; shape model; 3D ultrasound; cardiac segmentation |
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In this paper, we propose an automatic method for constructing an active shape model (ASM) to segment the complete cardiac left ventricle in 3D ultrasound (3DUS) images, which avoids costly manual landmarking. The automatic construction of the ASM has already been addressed in the literature; however, the direct application of these methods to 3DUS is hampered by a high level of noise and artefacts. Therefore, we propose to construct the ASM by fusing the multidetector computed tomography data, to learn the shape, with the artificially generated 3DUS, in order to learn the neighbourhood of the boundaries. Our artificial images were generated by two approaches: a faster one that does not take into account the geometry of the transducer, and a more comprehensive one, implemented in Field II toolbox. The segmentation accuracy of our ASM was evaluated on 20 patients with left-ventricular asynchrony, demonstrating plausibility of the approach. |
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2168-1163 |
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MILAB |
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Admin @ si @ BBS2016 |
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2449 |
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Jean-Pascal Jacob; Mariella Dimiccoli; Lionel Moisan |
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Active skeleton for bacteria modeling |
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2016 |
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Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization |
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CMBBE |
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5 |
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4 |
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274-286 |
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Bacteria modelling; medial axis; active contours; active skeleton; shape contraints |
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The investigation of spatio-temporal dynamics of bacterial cells and their molecular components requires automated image analysis tools to track cell shape properties and molecular component locations inside the cells. In the study of bacteria aging, the molecular components of interest are protein aggregates accumulated near bacteria boundaries. This particular location makes very ambiguous the correspondence between aggregates and cells, since computing accurately bacteria boundaries in phase-contrast time-lapse imaging is a challenging task. This paper proposes an active skeleton formulation for bacteria modeling which provides several advantages: an easy computation of shape properties (perimeter, length, thickness, orientation), an improved boundary accuracy in noisy images, and a natural bacteria-centered coordinate system that permits the intrinsic location of molecular components inside the cell. Starting from an initial skeleton estimate, the medial axis of the bacterium is obtained by minimizing an energy function which incorporates bacteria shape constraints. Experimental results on biological images and comparative evaluation of the performances validate the proposed approach for modeling cigar-shaped bacteria like Escherichia coli. The Image-J plugin of the proposed method can be found online at this http URL |
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MILAB |
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Admin @ si @ JDM2016 |
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2711 |
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Marc Oliu; Ciprian Corneanu; Kamal Nasrollahi; Olegs Nikisins; Sergio Escalera; Yunlian Sun; Haiqing Li; Zhenan Sun; Thomas B. Moeslund; Modris Greitans |
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Improved RGB-D-T based Face Recognition |
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Journal Article |
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2016 |
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IET Biometrics |
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BIO |
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5 |
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4 |
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297 - 303 |
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Reliable facial recognition systems are of crucial importance in various applications from entertainment to security. Thanks to the deep-learning concepts introduced in the field, a significant improvement in the performance of the unimodal facial recognition systems has been observed in the recent years. At the same time a multimodal facial recognition is a promising approach. This study combines the latest successes in both directions by applying deep learning convolutional neural networks (CNN) to the multimodal RGB, depth, and thermal (RGB-D-T) based facial recognition problem outperforming previously published results. Furthermore, a late fusion of the CNN-based recognition block with various hand-crafted features (local binary patterns, histograms of oriented gradients, Haar-like rectangular features, histograms of Gabor ordinal measures) is introduced, demonstrating even better recognition performance on a benchmark RGB-D-T database. The obtained results in this study show that the classical engineered features and CNN-based features can complement each other for recognition purposes. |
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HuPBA;MILAB; |
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Admin @ si @ OCN2016 |
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2854 |
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Author |
Mariella Dimiccoli |
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Title |
Figure-ground segregation: A fully nonlocal approach |
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Journal Article |
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2016 |
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Vision Research |
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VR |
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126 |
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308-317 |
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Figure-ground segregation; Nonlocal approach; Directional linear voting; Nonlinear diffusion |
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We present a computational model that computes and integrates in a nonlocal fashion several configural cues for automatic figure-ground segregation. Our working hypothesis is that the figural status of each pixel is a nonlocal function of several geometric shape properties and it can be estimated without explicitly relying on object boundaries. The methodology is grounded on two elements: multi-directional linear voting and nonlinear diffusion. A first estimation of the figural status of each pixel is obtained as a result of a voting process, in which several differently oriented line-shaped neighborhoods vote to express their belief about the figural status of the pixel. A nonlinear diffusion process is then applied to enforce the coherence of figural status estimates among perceptually homogeneous regions. Computer simulations fit human perception and match the experimental evidence that several cues cooperate in defining figure-ground segregation. The results of this work suggest that figure-ground segregation involves feedback from cells with larger receptive fields in higher visual cortical areas. |
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MILAB; |
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Admin @ si @ Dim2016b |
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2623 |
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Miguel Oliveira; Victor Santos; Angel Sappa; P. Dias; A. Moreira |
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Incremental Scenario Representations for Autonomous Driving using Geometric Polygonal Primitives |
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Journal Article |
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2016 |
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Robotics and Autonomous Systems |
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RAS |
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83 |
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312-325 |
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Incremental scene reconstruction; Point clouds; Autonomous vehicles; Polygonal primitives |
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When an autonomous vehicle is traveling through some scenario it receives a continuous stream of sensor data. This sensor data arrives in an asynchronous fashion and often contains overlapping or redundant information. Thus, it is not trivial how a representation of the environment observed by the vehicle can be created and updated over time. This paper presents a novel methodology to compute an incremental 3D representation of a scenario from 3D range measurements. We propose to use macro scale polygonal primitives to model the scenario. This means that the representation of the scene is given as a list of large scale polygons that describe the geometric structure of the environment. Furthermore, we propose mechanisms designed to update the geometric polygonal primitives over time whenever fresh sensor data is collected. Results show that the approach is capable of producing accurate descriptions of the scene, and that it is computationally very efficient when compared to other reconstruction techniques. |
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Elsevier B.V. |
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ADAS; 600.086, 600.076 |
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Admin @ si @OSS2016a |
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2806 |
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Lluis Gomez; Dimosthenis Karatzas |
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A fast hierarchical method for multi‐script and arbitrary oriented scene text extraction |
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2016 |
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International Journal on Document Analysis and Recognition |
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IJDAR |
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19 |
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4 |
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335-349 |
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scene text; segmentation; detection; hierarchical grouping; perceptual organisation |
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Typography and layout lead to the hierarchical organisation of text in words, text lines, paragraphs. This inherent structure is a key property of text in any script and language, which has nonetheless been minimally leveraged by existing text detection methods. This paper addresses the problem of text
segmentation in natural scenes from a hierarchical perspective.
Contrary to existing methods, we make explicit use of text structure, aiming directly to the detection of region groupings corresponding to text within a hierarchy produced by an agglomerative similarity clustering process over individual regions. We propose an optimal way to construct such an hierarchy introducing a feature space designed to produce text group hypotheses with
high recall and a novel stopping rule combining a discriminative classifier and a probabilistic measure of group meaningfulness based in perceptual organization. Results obtained over four standard datasets, covering text in variable orientations and different languages, demonstrate that our algorithm, while being trained in a single mixed dataset, outperforms state of the art
methods in unconstrained scenarios. |
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DAG; 600.056; 601.197 |
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Admin @ si @ GoK2016a |
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2862 |
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Juan Ignacio Toledo; Alicia Fornes; Jordi Cucurull; Josep Llados |
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Election Tally Sheets Processing System |
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2016 |
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12th IAPR Workshop on Document Analysis Systems |
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364-368 |
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In paper based elections, manual tallies at polling station level produce myriads of documents. These documents share a common form-like structure and a reduced vocabulary worldwide. On the other hand, each tally sheet is filled by a different writer and on different countries, different scripts are used. We present a complete document analysis system for electoral tally sheet processing combining state of the art techniques with a new handwriting recognition subprocess based on unsupervised feature discovery with Variational Autoencoders and sequence classification with BLSTM neural networks. The whole system is designed to be script independent and allows a fast and reliable results consolidation process with reduced operational cost. |
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Santorini; Greece; April 2016 |
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DAG; 602.006; 600.061; 601.225; 600.077; 600.097 |
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TFC2016 |
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2752 |
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Youssef El Rhabi; Simon Loic; Brun Luc; Josep Llados; Felipe Lumbreras |
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Information Theoretic Rotationwise Robust Binary Descriptor Learning |
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2016 |
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Joint IAPR International Workshops on Statistical Techniques in Pattern Recognition (SPR) and Structural and Syntactic Pattern Recognition (SSPR) |
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In this paper, we propose a new data-driven approach for binary descriptor selection. In order to draw a clear analysis of common designs, we present a general information-theoretic selection paradigm. It encompasses several standard binary descriptor construction schemes, including a recent state-of-the-art one named BOLD. We pursue the same endeavor to increase the stability of the produced descriptors with respect to rotations. To achieve this goal, we have designed a novel offline selection criterion which is better adapted to the online matching procedure. The effectiveness of our approach is demonstrated on two standard datasets, where our descriptor is compared to BOLD and to several classical descriptors. In particular, it emerges that our approach can reproduce equivalent if not better performance as BOLD while relying on twice shorter descriptors. Such an improvement can be influential for real-time applications. |
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Mérida; Mexico; November 2016 |
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S+SSPR |
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DAG; ADAS; 600.097; 600.086 |
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Admin @ si @ RLL2016 |
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2871 |
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Dimosthenis Karatzas; V. Poulain d'Andecy; Marçal Rusiñol |
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Human-Document Interaction – a new frontier for document image analysis |
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2016 |
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12th IAPR Workshop on Document Analysis Systems |
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369-374 |
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All indications show that paper documents will not cede in favour of their digital counterparts, but will instead be used increasingly in conjunction with digital information. An open challenge is how to seamlessly link the physical with the digital – how to continue taking advantage of the important affordances of paper, without missing out on digital functionality. This paper
presents the authors’ experience with developing systems for Human-Document Interaction based on augmented document interfaces and examines new challenges and opportunities arising for the document image analysis field in this area. The system presented combines state of the art camera-based document
image analysis techniques with a range of complementary tech-nologies to offer fluid Human-Document Interaction. Both fixed and nomadic setups are discussed that have gone through user testing in real-life environments, and use cases are presented that span the spectrum from business to educational application |
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Santorini; Greece; April 2016 |
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DAG; 600.084; 600.077 |
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KPR2016 |
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2756 |
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Y. Patel; Lluis Gomez; Marçal Rusiñol; Dimosthenis Karatzas |
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Dynamic Lexicon Generation for Natural Scene Images |
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Conference Article |
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2016 |
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14th European Conference on Computer Vision Workshops |
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395-410 |
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scene text; photo OCR; scene understanding; lexicon generation; topic modeling; CNN |
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Many scene text understanding methods approach the endtoend recognition problem from a word-spotting perspective and take huge bene t from using small per-image lexicons. Such customized lexicons are normally assumed as given and their source is rarely discussed.
In this paper we propose a method that generates contextualized lexicons
for scene images using only visual information. For this, we exploit
the correlation between visual and textual information in a dataset consisting
of images and textual content associated with them. Using the topic modeling framework to discover a set of latent topics in such a dataset allows us to re-rank a xed dictionary in a way that prioritizes the words that are more likely to appear in a given image. Moreover, we train a CNN that is able to reproduce those word rankings but using only the image raw pixels as input. We demonstrate that the quality of the automatically obtained custom lexicons is superior to a generic frequency-based baseline. |
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Amsterdam; The Netherlands; October 2016 |
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ECCVW |
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DAG; 600.084 |
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Admin @ si @ PGR2016 |
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2825 |
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Juan A. Carvajal Ayala; Dennis Romero; Angel Sappa |
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Fine-tuning based deep convolutional networks for lepidopterous genus recognition |
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2016 |
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21st Ibero American Congress on Pattern Recognition |
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467-475 |
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This paper describes an image classification approach oriented to identify specimens of lepidopterous insects at Ecuadorian ecological reserves. This work seeks to contribute to studies in the area of biology about genus of butterflies and also to facilitate the registration of unrecognized specimens. The proposed approach is based on the fine-tuning of three widely used pre-trained Convolutional Neural Networks (CNNs). This strategy is intended to overcome the reduced number of labeled images. Experimental results with a dataset labeled by expert biologists is presented, reaching a recognition accuracy above 92%. |
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Lima; Perú; November 2016 |
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CIARP |
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ADAS; 600.086 |
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Admin @ si @ CRS2016 |
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2913 |
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Mariella Dimiccoli; Jean-Pascal Jacob; Lionel Moisan |
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Particle detection and tracking in fluorescence time-lapse imaging: a contrario approach |
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2016 |
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Journal of Machine Vision and Applications |
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MVAP |
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27 |
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511-527 |
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particle detection; particle tracking; a-contrario approach; time-lapse fluorescence imaging |
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In this work, we propose a probabilistic approach for the detection and the
tracking of particles on biological images. In presence of very noised and poor
quality data, particles and trajectories can be characterized by an a-contrario
model, that estimates the probability of observing the structures of interest
in random data. This approach, first introduced in the modeling of human visual
perception and then successfully applied in many image processing tasks, leads
to algorithms that do not require a previous learning stage, nor a tedious
parameter tuning and are very robust to noise. Comparative evaluations against
a well established baseline show that the proposed approach outperforms the
state of the art. |
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MILAB; |
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Admin @ si @ DJM2016 |
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2735 |
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Maria Oliver; G. Haro; Mariella Dimiccoli; B. Mazin; C. Ballester |
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A Computational Model for Amodal Completion |
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2016 |
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Journal of Mathematical Imaging and Vision |
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JMIV |
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56 |
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3 |
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511–534 |
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Perception; visual completion; disocclusion; Bayesian model;relatability; Euler elastica |
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This paper presents a computational model to recover the most likely interpretation
of the 3D scene structure from a planar image, where some objects may occlude others. The estimated scene interpretation is obtained by integrating some global and local cues and provides both the complete disoccluded objects that form the scene and their ordering according to depth.
Our method first computes several distal scenes which are compatible with the proximal planar image. To compute these different hypothesized scenes, we propose a perceptually inspired object disocclusion method, which works by minimizing the Euler's elastica as well as by incorporating the relatability of partially occluded contours and the convexity of the disoccluded objects. Then, to estimate the preferred scene we rely on a Bayesian model and define probabilities taking into account the global complexity of the objects in the hypothesized scenes as well as the effort of bringing these objects in their relative position in the planar image, which is also measured by an Euler's elastica-based quantity. The model is illustrated with numerical experiments on, both, synthetic and real images showing the ability of our model to reconstruct the occluded objects and the preferred perceptual order among them. We also present results on images of the Berkeley dataset with provided figure-ground ground-truth labeling. |
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MILAB; 601.235 |
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Admin @ si @ OHD2016b |
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2745 |
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