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Ferran Diego, Joan Serrat, & Antonio Lopez. (2013). Joint spatio-temporal alignment of sequences. TMM - IEEE Transactions on Multimedia, 15(6), 1377–1387.
Abstract: Video alignment is important in different areas of computer vision such as wide baseline matching, action recognition, change detection, video copy detection and frame dropping prevention. Current video alignment methods usually deal with a relatively simple case of fixed or rigidly attached cameras or simultaneous acquisition. Therefore, in this paper we propose a joint video alignment for bringing two video sequences into a spatio-temporal alignment. Specifically, the novelty of the paper is to formulate the video alignment to fold the spatial and temporal alignment into a single alignment framework. This simultaneously satisfies a frame-correspondence and frame-alignment similarity; exploiting the knowledge among neighbor frames by a standard pairwise Markov random field (MRF). This new formulation is able to handle the alignment of sequences recorded at different times by independent moving cameras that follows a similar trajectory, and also generalizes the particular cases that of fixed geometric transformation and/or linear temporal mapping. We conduct experiments on different scenarios such as sequences recorded simultaneously or by moving cameras to validate the robustness of the proposed approach. The proposed method provides the highest video alignment accuracy compared to the state-of-the-art methods on sequences recorded from vehicles driving along the same track at different times.
Keywords: video alignment
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Weiqing Min, Shuqiang Jiang, Jitao Sang, Huayang Wang, Xinda Liu, & Luis Herranz. (2017). Being a Supercook: Joint Food Attributes and Multimodal Content Modeling for Recipe Retrieval and Exploration. TMM - IEEE Transactions on Multimedia, 19(5), 1100–1113.
Abstract: This paper considers the problem of recipe-oriented image-ingredient correlation learning with multi-attributes for recipe retrieval and exploration. Existing methods mainly focus on food visual information for recognition while we model visual information, textual content (e.g., ingredients), and attributes (e.g., cuisine and course) together to solve extended recipe-oriented problems, such as multimodal cuisine classification and attribute-enhanced food image retrieval. As a solution, we propose a multimodal multitask deep belief network (M3TDBN) to learn joint image-ingredient representation regularized by different attributes. By grouping ingredients into visible ingredients (which are visible in the food image, e.g., “chicken” and “mushroom”) and nonvisible ingredients (e.g., “salt” and “oil”), M3TDBN is capable of learning both midlevel visual representation between images and visible ingredients and nonvisual representation. Furthermore, in order to utilize different attributes to improve the intermodality correlation, M3TDBN incorporates multitask learning to make different attributes collaborate each other. Based on the proposed M3TDBN, we exploit the derived deep features and the discovered correlations for three extended novel applications: 1) multimodal cuisine classification; 2) attribute-augmented cross-modal recipe image retrieval; and 3) ingredient and attribute inference from food images. The proposed approach is evaluated on the constructed Yummly dataset and the evaluation results have validated the effectiveness of the proposed approach.
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Luis Herranz, Shuqiang Jiang, & Ruihan Xu. (2017). Modeling Restaurant Context for Food Recognition. TMM - IEEE Transactions on Multimedia, 19(2), 430–440.
Abstract: Food photos are widely used in food logs for diet monitoring and in social networks to share social and gastronomic experiences. A large number of these images are taken in restaurants. Dish recognition in general is very challenging, due to different cuisines, cooking styles, and the intrinsic difficulty of modeling food from its visual appearance. However, contextual knowledge can be crucial to improve recognition in such scenario. In particular, geocontext has been widely exploited for outdoor landmark recognition. Similarly, we exploit knowledge about menus and location of restaurants and test images. We first adapt a framework based on discarding unlikely categories located far from the test image. Then, we reformulate the problem using a probabilistic model connecting dishes, restaurants, and locations. We apply that model in three different tasks: dish recognition, restaurant recognition, and location refinement. Experiments on six datasets show that by integrating multiple evidences (visual, location, and external knowledge) our system can boost the performance in all tasks.
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Eduardo Aguilar, Beatriz Remeseiro, Marc Bolaños, & Petia Radeva. (2018). Grab, Pay, and Eat: Semantic Food Detection for Smart Restaurants. IEEE Transactions on Multimedia, 20(12), 3266–3275.
Abstract: The increase in awareness of people towards their nutritional habits has drawn considerable attention to the field of automatic food analysis. Focusing on self-service restaurants environment, automatic food analysis is not only useful for extracting nutritional information from foods selected by customers, it is also of high interest to speed up the service solving the bottleneck produced at the cashiers in times of high demand. In this paper, we address the problem of automatic food tray analysis in canteens and restaurants environment, which consists in predicting multiple foods placed on a tray image. We propose a new approach for food analysis based on convolutional neural networks, we name Semantic Food Detection, which integrates in the same framework food localization, recognition and segmentation. We demonstrate that our method improves the state of the art food detection by a considerable margin on the public dataset UNIMIB2016 achieving about 90% in terms of F-measure, and thus provides a significant technological advance towards the automatic billing in restaurant environments.
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Pau Rodriguez, Diego Velazquez, Guillem Cucurull, Josep M. Gonfaus, Xavier Roca, & Jordi Gonzalez. (2020). Pay attention to the activations: a modular attention mechanism for fine-grained image recognition. TMM - IEEE Transactions on Multimedia, 22(2), 502–514.
Abstract: Fine-grained image recognition is central to many multimedia tasks such as search, retrieval, and captioning. Unfortunately, these tasks are still challenging since the appearance of samples of the same class can be more different than those from different classes. This issue is mainly due to changes in deformation, pose, and the presence of clutter. In the literature, attention has been one of the most successful strategies to handle the aforementioned problems. Attention has been typically implemented in neural networks by selecting the most informative regions of the image that improve classification. In contrast, in this paper, attention is not applied at the image level but to the convolutional feature activations. In essence, with our approach, the neural model learns to attend to lower-level feature activations without requiring part annotations and uses those activations to update and rectify the output likelihood distribution. The proposed mechanism is modular, architecture-independent, and efficient in terms of both parameters and computation required. Experiments demonstrate that well-known networks such as wide residual networks and ResNeXt, when augmented with our approach, systematically improve their classification accuracy and become more robust to changes in deformation and pose and to the presence of clutter. As a result, our proposal reaches state-of-the-art classification accuracies in CIFAR-10, the Adience gender recognition task, Stanford Dogs, and UEC-Food100 while obtaining competitive performance in ImageNet, CIFAR-100, CUB200 Birds, and Stanford Cars. In addition, we analyze the different components of our model, showing that the proposed attention modules succeed in finding the most discriminative regions of the image. Finally, as a proof of concept, we demonstrate that with only local predictions, an augmented neural network can successfully classify an image before reaching any fully connected layer, thus reducing the computational amount up to 10%.
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A.F. Sole, S. Ngan, G. Sapiro, X. Hu, & Antonio Lopez. (2001). Anisotropic 2-D and 3-D Averaging of fMRI Signals. IEEE Transactions on Medical Imaging, 20(2): 86–93 (IF: 3.142), .
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Cristina Cañero, Fernando Vilariño, & Petia Radeva. (2002). Predictive (un) distortion model and 3D Reconstruction by Biplane Snakes. IEEE Transactions on Medical Imaging (IF: 2.911).
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Amir A.Amini, Yasheng Chen, Mohamed Elayyadi, & Petia Radeva. (2001). Tag Surface Reconstruction and Tracking of Myocardial Beads from SPAMM-MRI with Parametric B-Spline Surfaces. TMI - IEEE Transactions on Medical Imaging, 94–103.
Abstract: Magnetic resonance imaging (MRI) is unique in its ability to noninvasively and selectively alter tissue magnetization, and create tag planes intersecting image slices. The resulting grid of signal voids allows for tracking deformations of tissues in otherwise homogeneous-signal myocardial regions. In this paper, we propose a specific spatial modulation of magnetization (SPAMM) imaging protocol together with efficient techniques for measurement of three-dimensional (3-D) motion of material points of the human heart (referred to as myocardial beads) from images collected with the SPAMM method. The techniques make use of tagged images in orthogonal views by explicitly reconstructing 3-D B-spline surface representation of tag planes (tag planes in two orthogonal orientations intersecting the short-axis (SA) image slices and tag planes in an orientation orthogonal to the short-axis tag planes intersecting long-axis (LA) image slices). The developed methods allow for viewing deformations of 3-D tag surfaces, spatial correspondence of long-axis and short-axis image slice and tag positions, as well as nonrigid movement of myocardial beads as a function of time.
Keywords: B-spline surfaces, cardiac motion, myocardial beads, myocardial infarction, tagged MRI.
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Fernando Vilariño, Panagiota Spyridonos, Fosca De Iorio, Jordi Vitria, Fernando Azpiroz, & Petia Radeva. (2010). Intestinal Motility Assessment With Video Capsule Endoscopy: Automatic Annotation of Phasic Intestinal Contractions. TMI - IEEE Transactions on Medical Imaging, 29(2), 246–259.
Abstract: Intestinal motility assessment with video capsule endoscopy arises as a novel and challenging clinical fieldwork. This technique is based on the analysis of the patterns of intestinal contractions shown in a video provided by an ingestible capsule with a wireless micro-camera. The manual labeling of all the motility events requires large amount of time for offline screening in search of findings with low prevalence, which turns this procedure currently unpractical. In this paper, we propose a machine learning system to automatically detect the phasic intestinal contractions in video capsule endoscopy, driving a useful but not feasible clinical routine into a feasible clinical procedure. Our proposal is based on a sequential design which involves the analysis of textural, color, and blob features together with SVM classifiers. Our approach tackles the reduction of the imbalance rate of data and allows the inclusion of domain knowledge as new stages in the cascade. We present a detailed analysis, both in a quantitative and a qualitative way, by providing several measures of performance and the assessment study of interobserver variability. Our system performs at 70% of sensitivity for individual detection, whilst obtaining equivalent patterns to those of the experts for density of contractions.
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Jaume Garcia, Debora Gil, Luis Badiella, Aura Hernandez-Sabate, Francesc Carreras, Sandra Pujades, et al. (2010). A Normalized Framework for the Design of Feature Spaces Assessing the Left Ventricular Function. TMI - IEEE Transactions on Medical Imaging, 29(3), 733–745.
Abstract: A through description of the left ventricle functionality requires combining complementary regional scores. A main limitation is the lack of multiparametric normality models oriented to the assessment of regional wall motion abnormalities (RWMA). This paper covers two main topics involved in RWMA assessment. We propose a general framework allowing the fusion and comparison across subjects of different regional scores. Our framework is used to explore which combination of regional scores (including 2-D motion and strains) is better suited for RWMA detection. Our statistical analysis indicates that for a proper (within interobserver variability) identification of RWMA, models should consider motion and extreme strains.
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Debora Gil, Aura Hernandez-Sabate, Oriol Rodriguez, J. Mauri, & Petia Radeva. (2006). Statistical Strategy for Anisotropic Adventitia Modelling in IVUS. IEEE Transactions on Medical Imaging, 25(6), 768–778.
Abstract: Vessel plaque assessment by analysis of intravascular ultrasound sequences is a useful tool for cardiac disease diagnosis and intervention. Manual detection of luminal (inner) and mediaadventitia (external) vessel borders is the main activity of physicians in the process of lumen narrowing (plaque) quantification. Difficult definition of vessel border descriptors, as well as, shades, artifacts, and blurred signal response due to ultrasound physical properties trouble automated adventitia segmentation. In order to efficiently approach such a complex problem, we propose blending advanced anisotropic filtering operators and statistical classification techniques into a vessel border modelling strategy. Our systematic statistical analysis shows that the reported adventitia detection achieves an accuracy in the range of interobserver variability regardless of plaque nature, vessel geometry, and incomplete vessel borders. Index Terms–-Anisotropic processing, intravascular ultrasound (IVUS), vessel border segmentation, vessel structure classification.
Keywords: Corners; T-junctions; Wavelets
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Debora Gil, Oriol Rodriguez-Leor, Petia Radeva, & J. Mauri. (2008). Myocardial Perfusion Characterization From Contrast Angiography Spectral Distribution. IEEE Transactions on Medical Imaging, 27(5), 641–649.
Abstract: Despite recovering a normal coronary flow after acute myocardial infarction, percutaneous coronary intervention does not guarantee a proper perfusion (irrigation) of the infarcted area. This damage in microcirculation integrity may detrimentally affect the patient survival. Visual assessment of the myocardium opacification in contrast angiography serves to define a subjective score of the microcirculation integrity myocardial blush analysis (MBA). Although MBA correlates with patient prognosis its visual assessment is a very difficult task that requires of a highly expertise training in order to achieve a good intraobserver and interobserver agreement. In this paper, we provide objective descriptors of the myocardium staining pattern by analyzing the spectrum of the image local statistics. The descriptors proposed discriminate among the different phenomena observed in the angiographic sequence and allow defining an objective score of the myocardial perfusion.
Keywords: Contrast angiography; myocardial perfusion; spectral analysis.
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Aura Hernandez-Sabate, Debora Gil, Eduard Fernandez-Nofrerias, Petia Radeva, & Enric Marti. (2009). Approaching Artery Rigid Dynamics in IVUS. TMI - IEEE Transactions on Medical Imaging, 28(11), 1670–1680.
Abstract: Tissue biomechanical properties (like strain and stress) are playing an increasing role in diagnosis and long-term treatment of intravascular coronary diseases. Their assessment strongly relies on estimation of vessel wall deformation. Since intravascular ultrasound (IVUS) sequences allow visualizing vessel morphology and reflect its dynamics, this technique represents a useful tool for evaluation of tissue mechanical properties. Image misalignment introduced by vessel-catheter motion is a major artifact for a proper tracking of tissue deformation. In this work, we focus on compensating and assessing IVUS rigid in-plane motion due to heart beating. Motion parameters are computed by considering both the vessel geometry and its appearance in the image. Continuum mechanics laws serve to introduce a novel score measuring motion reduction in in vivo sequences. Synthetic experiments validate the proposed score as measure of motion parameters accuracy; whereas results in in vivo pullbacks show the reliability of the presented methodologies in clinical cases.
Keywords: Fourier analysis; intravascular ultrasound (IVUS) dynamics; longitudinal motion; quality measures; tissue deformation.
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Jorge Bernal, Nima Tajkbaksh, F. Javier Sanchez, Bogdan J. Matuszewski, Hao Chen, Lequan Yu, et al. (2017). Comparative Validation of Polyp Detection Methods in Video Colonoscopy: Results from the MICCAI 2015 Endoscopic Vision Challenge. TMI - IEEE Transactions on Medical Imaging, 36(6), 1231–1249.
Abstract: Colonoscopy is the gold standard for colon cancer screening though still some polyps are missed, thus preventing early disease detection and treatment. Several computational systems have been proposed to assist polyp detection during colonoscopy but so far without consistent evaluation. The lack
of publicly available annotated databases has made it difficult to compare methods and to assess if they achieve performance levels acceptable for clinical use. The Automatic Polyp Detection subchallenge, conducted as part of the Endoscopic Vision Challenge (http://endovis.grand-challenge.org) at the international conference on Medical Image Computing and Computer Assisted
Intervention (MICCAI) in 2015, was an effort to address this need. In this paper, we report the results of this comparative evaluation of polyp detection methods, as well as describe additional experiments to further explore differences between methods. We define performance metrics and provide evaluation databases that allow comparison of multiple methodologies. Results show that convolutional neural networks (CNNs) are the state of the art. Nevertheless it is also demonstrated that combining different methodologies can lead to an improved overall performance.
Keywords: Endoscopic vision; Polyp Detection; Handcrafted features; Machine Learning; Validation Framework
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Victor M. Campello, Polyxeni Gkontra, Cristian Izquierdo, Carlos Martin-Isla, Alireza Sojoudi, Peter M. Full, et al. (2021). Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Segmentation: The M&Ms Challenge. TMI - IEEE Transactions on Medical Imaging, 40(12), 3543–3554.
Abstract: The emergence of deep learning has considerably advanced the state-of-the-art in cardiac magnetic resonance (CMR) segmentation. Many techniques have been proposed over the last few years, bringing the accuracy of automated segmentation close to human performance. However, these models have been all too often trained and validated using cardiac imaging samples from single clinical centres or homogeneous imaging protocols. This has prevented the development and validation of models that are generalizable across different clinical centres, imaging conditions or scanner vendors. To promote further research and scientific benchmarking in the field of generalizable deep learning for cardiac segmentation, this paper presents the results of the Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Segmentation (M&Ms) Challenge, which was recently organized as part of the MICCAI 2020 Conference. A total of 14 teams submitted different solutions to the problem, combining various baseline models, data augmentation strategies, and domain adaptation techniques. The obtained results indicate the importance of intensity-driven data augmentation, as well as the need for further research to improve generalizability towards unseen scanner vendors or new imaging protocols. Furthermore, we present a new resource of 375 heterogeneous CMR datasets acquired by using four different scanner vendors in six hospitals and three different countries (Spain, Canada and Germany), which we provide as open-access for the community to enable future research in the field.
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