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Author |
Aura Hernandez-Sabate; David Rotger; Debora Gil |
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Title |
Image-based ECG sampling of IVUS sequences |
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Conference Article |
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Year |
2008 |
Publication |
Proc. IEEE Ultrasonics Symp. IUS 2008 |
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Pages |
1330-1333 |
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Keywords |
Longitudinal Motion; Image-based ECG-gating; Fourier analysis |
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Abstract  |
Longitudinal motion artifacts in IntraVascular UltraSound (IVUS) sequences hinders a properly 3D reconstruction and vessel measurements. Most of current techniques base on the ECG signal to obtain a gated pullback without the longitudinal artifact by using a specific hardware or the ECG signal itself. The potential of IVUS images processing for phase retrieval still remains little explored. In this paper, we present a fast forward image-based algorithm to approach ECG sampling. Inspired on the fact that maximum and minimum lumen areas are related to end-systole and end-diastole, our cardiac phase retrieval is based on the analysis of tissue density of mass along the sequence. The comparison between automatic and manual phase retrieval (0.07 ± 0.07 mm. of error) encourages a deep validation contrasting with ECG signals. |
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Beijing (China) |
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IAM;MILAB |
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no |
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Call Number |
IAM @ iam @ HRG2008 |
Serial |
1553 |
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Author |
Sergio Vera; Miguel Angel Gonzalez Ballester; Debora Gil |
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Title |
A medial map capturing the essential geometry of organs |
Type |
Conference Article |
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Year |
2012 |
Publication |
ISBI Workshop on Open Source Medical Image Analysis software |
Abbreviated Journal |
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Pages |
1691 - 1694 |
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Keywords |
Medial Surface Representation, Volume Reconstruction,Geometry , Image reconstruction , Liver , Manifolds , Shape , Surface morphology , Surface reconstruction |
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Abstract |
Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Accurate computation of one pixel wide medial surfaces is mandatory. Those surfaces must represent faithfully the geometry of the volume. Although morphological methods produce excellent results in 2D, their complexity and quality drops across dimensions, due to a more complex description of pixel neighborhoods. This paper introduces a continuous operator for accurate and efficient computation of medial structures of arbitrary dimension. Our experiments show its higher performance for medical imaging applications in terms of simplicity of medial structures and capability for reconstructing the anatomical volume |
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Barcelona,Spain |
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IEEE |
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ISSN |
1945-7928 |
ISBN |
978-1-4577-1857-1 |
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ISBI |
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IAM |
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Call Number |
IAM @ iam @ VGG2012a |
Serial |
1989 |
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Author |
Patricia Marquez;Debora Gil;Aura Hernandez-Sabate |
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Title |
A Complete Confidence Framework for Optical Flow |
Type |
Conference Article |
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Year |
2012 |
Publication |
12th European Conference on Computer Vision – Workshops and Demonstrations |
Abbreviated Journal |
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Volume |
7584 |
Issue |
2 |
Pages |
124-133 |
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Keywords |
Optical flow, confidence measures, sparsification plots, error prediction plots |
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Abstract |
Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations. |
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Springer-Verlag |
Place of Publication |
Florence, Italy, October 7-13, 2012 |
Editor |
Andrea Fusiello, Vittorio Murino ,Rita Cucchiara |
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LNCS |
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978-3-642-33867-0 |
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ECCVW |
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IAM;ADAS; |
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Call Number |
IAM @ iam @ MGH2012b |
Serial |
1991 |
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Author |
Sergio Vera; Debora Gil; Agnes Borras; F. Javier Sanchez; Frederic Perez; Marius G. Linguraru |
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Title |
Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs |
Type |
Conference Article |
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Year |
2011 |
Publication |
Workshop on Computational and Clinical Applications in Abdominal Imaging |
Abbreviated Journal |
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Volume |
7029 |
Issue |
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Pages |
223-230 |
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Keywords |
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Abstract |
Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations. |
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Address |
Nice, France |
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Springer Berlin Heidelberg |
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Editor |
In H. Yoshida et al |
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ABDI |
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IAM; MV |
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no |
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Call Number |
VGB2011 |
Serial |
2036 |
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Author |
Albert Andaluz; Francesc Carreras; Cristina Santa Marta;Debora Gil |
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Title |
Myocardial torsion estimation with Tagged-MRI in the OsiriX platform |
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Conference Article |
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Year |
2012 |
Publication |
ISBI Workshop on Open Source Medical Image Analysis software |
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Abstract |
Myocardial torsion (MT) plays a crucial role in the assessment of the functionality of the
left ventricle. For this purpose, the IAM group at the CVC has developed the Harmonic Phase Flow (HPF) plugin for the Osirix DICOM platform . We have validated its funcionalty on sequences acquired using different protocols and including healthy and pathological cases. Results show similar torsion trends for SPAMM acquisitions, with pathological cases introducing expected deviations from the ground truth. Finally, we provide the plugin free of charge at http://iam.cvc.uab.es |
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Address |
Barcelona, Spain |
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IEEE |
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Editor |
Wiro Niessen (Erasmus MC) and Marc Modat (UCL) |
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ISBI |
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IAM |
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no |
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Call Number |
IAM @ iam @ ACS2012 |
Serial |
1900 |
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Author |
Jaume Garcia; Joel Barajas; Francesc Carreras; Sandra Pujades; Petia Radeva |
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Title |
An intuitive validation technique to compare local versus global tagged MRI analysis |
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Conference Article |
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Year |
2005 |
Publication |
Computers In Cardiology |
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32 |
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29–32 |
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Abstract |
Myocardium appears as a uniform tissue that seen in convectional Magnetic Resonance Images (MRI) shows just the contractile part of its movement. MR Tagging is a unique imaging technique that prints a grid over the tissue which moves according to the underlying movement of the myocardium revealing the true deformation of the cardiac muscle. Optical flow techniques based on spectral information estimate tissue displacement by analyzing information encoded in the phase maps which can be obtained using, local (Gabor) and global (HARP) methods. In this paper we compare both in synthetic and real Tagged MR sequences. We conclude that local method is slightly more accurate than the global one. On the other hand, global method is more efficient as it is much faster and less parameters have to be taken into account |
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Lyon (France) |
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ISBN |
0-7803-9337-6 |
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IAM;MILAB |
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no |
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Call Number |
IAM @ iam @ GBC2005 |
Serial |
639 |
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Author |
Andrew Nolan; Daniel Serrano; Aura Hernandez-Sabate; Daniel Ponsa; Antonio Lopez |
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Title |
Obstacle mapping module for quadrotors on outdoor Search and Rescue operations |
Type |
Conference Article |
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Year |
2013 |
Publication |
International Micro Air Vehicle Conference and Flight Competition |
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Keywords |
UAV |
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Abstract |
Obstacle avoidance remains a challenging task for Micro Aerial Vehicles (MAV), due to their limited payload capacity to carry advanced sensors. Unlike larger vehicles, MAV can only carry light weight sensors, for instance a camera, which is our main assumption in this work. We explore passive monocular depth estimation and propose a novel method Position Aided Depth Estimation
(PADE). We analyse PADE performance and compare it against the extensively used Time To Collision (TTC). We evaluate the accuracy, robustness to noise and speed of three Optical Flow (OF) techniques, combined with both depth estimation methods. Our results show PADE is more accurate than TTC at depths between 0-12 meters and is less sensitive to noise. Our findings highlight the potential application of PADE for MAV to perform safe autonomous navigation in
unknown and unstructured environments. |
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Toulouse; France; September 2013 |
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IMAV |
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Notes |
ADAS; 600.054; 600.057;IAM |
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no |
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Call Number |
Admin @ si @ NSH2013 |
Serial |
2371 |
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Author |
Patricia Marquez; Debora Gil; R.Mester; Aura Hernandez-Sabate |
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Title |
Local Analysis of Confidence Measures for Optical Flow Quality Evaluation |
Type |
Conference Article |
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Year |
2014 |
Publication |
9th International Conference on Computer Vision Theory and Applications |
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3 |
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450-457 |
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Keywords |
Optical Flow; Confidence Measure; Performance Evaluation. |
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Abstract |
Optical Flow (OF) techniques facing the complexity of real sequences have been developed in the last years. Even using the most appropriate technique for our specific problem, at some points the output flow might fail to achieve the minimum error required for the system. Confidence measures computed from either input data or OF output should discard those points where OF is not accurate enough for its further use. It follows that evaluating the capabilities of a confidence measure for bounding OF error is as important as the definition
itself. In this paper we analyze different confidence measures and point out their advantages and limitations for their use in real world settings. We also explore the agreement with current tools for their evaluation of confidence measures performance. |
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Lisboa; January 2014 |
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VISAPP |
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IAM; ADAS; 600.044; 600.060; 600.057; 601.145; 600.076; 600.075 |
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no |
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Call Number |
Admin @ si @ MGM2014 |
Serial |
2432 |
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Author |
Patricia Marquez; Debora Gil; Aura Hernandez-Sabate |
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Title |
A Confidence Measure for Assessing Optical Flow Accuracy in the Absence of Ground Truth |
Type |
Conference Article |
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Year |
2011 |
Publication |
IEEE International Conference on Computer Vision – Workshops |
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2042-2049 |
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Keywords |
IEEE International Conference on Computer Vision – Workshops |
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Abstract |
Optical flow is a valuable tool for motion analysis in autonomous navigation systems. A reliable application requires determining the accuracy of the computed optical flow. This is a main challenge given the absence of ground truth in real world sequences. This paper introduces a measure of optical flow accuracy for Lucas-Kanade based flows in terms of the numerical stability of the data-term. We call this measure optical flow condition number. A statistical analysis over ground-truth data show a good statistical correlation between the condition number and optical flow error. Experiments on driving sequences illustrate its potential for autonomous navigation systems. |
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Publisher |
IEEE |
Place of Publication |
Barcelona (Spain) |
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English |
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English |
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ICCVW |
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IAM; ADAS |
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no |
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Call Number |
IAM @ iam @ MGH2011 |
Serial |
1682 |
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Author |
Patricia Marquez; Debora Gil ; Aura Hernandez-Sabate |
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Title |
Error Analysis for Lucas-Kanade Based Schemes |
Type |
Conference Article |
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Year |
2012 |
Publication |
9th International Conference on Image Analysis and Recognition |
Abbreviated Journal |
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7324 |
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I |
Pages |
184-191 |
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Keywords |
Optical flow, Confidence measure, Lucas-Kanade, Cardiac Magnetic Resonance |
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Abstract |
Optical flow is a valuable tool for motion analysis in medical imaging sequences. A reliable application requires determining the accuracy of the computed optical flow. This is a main challenge given the absence of ground truth in medical sequences. This paper presents an error analysis of Lucas-Kanade schemes in terms of intrinsic design errors and numerical stability of the algorithm. Our analysis provides a confidence measure that is naturally correlated to the accuracy of the flow field. Our experiments show the higher predictive value of our confidence measure compared to existing measures. |
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Aveiro, Portugal |
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Springer-Verlag Berlin Heidelberg |
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english |
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Campilho, Aurélio and Kamel, Mohamed |
Series Title |
Lecture Notes in Computer Science |
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LNCS |
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0302-9743 |
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978-3-642-31294-6 |
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ICIAR |
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IAM |
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Call Number |
IAM @ iam @ MGH2012a |
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1899 |
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