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Author |
Jorge Bernal; F. Javier Sanchez; Fernando Vilariño |
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Title |
Towards Automatic Polyp Detection with a Polyp Appearance Model |
Type |
Journal Article |
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Year |
2012 |
Publication  |
Pattern Recognition |
Abbreviated Journal |
PR |
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Volume |
45 |
Issue |
9 |
Pages |
3166-3182 |
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Keywords |
Colonoscopy,PolypDetection,RegionSegmentation,SA-DOVA descriptot |
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Abstract |
This work aims at the automatic polyp detection by using a model of polyp appearance in the context of the analysis of colonoscopy videos. Our method consists of three stages: region segmentation, region description and region classification. The performance of our region segmentation method guarantees that if a polyp is present in the image, it will be exclusively and totally contained in a single region. The output of the algorithm also defines which regions can be considered as non-informative. We define as our region descriptor the novel Sector Accumulation-Depth of Valleys Accumulation (SA-DOVA), which provides a necessary but not sufficient condition for the polyp presence. Finally, we classify our segmented regions according to the maximal values of the SA-DOVA descriptor. Our preliminary classification results are promising, especially when classifying those parts of the image that do not contain a polyp inside. |
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Elsevier |
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0031-3203 |
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800 |
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IbPRIA |
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Notes |
MV;SIAI |
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no |
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Call Number |
Admin @ si @ BSV2012; IAM @ iam |
Serial |
1997 |
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Author |
Onur Ferhat; Arcadi Llanza; Fernando Vilariño |
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Title |
A Feature-Based Gaze Estimation Algorithm for Natural Light Scenarios |
Type |
Conference Article |
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Year |
2015 |
Publication |
Pattern Recognition and Image Analysis, Proceedings of 7th Iberian Conference , ibPRIA 2015 |
Abbreviated Journal |
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Volume |
9117 |
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Pages |
569-576 |
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Keywords |
Eye tracking; Gaze estimation; Natural light; Webcam |
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Abstract |
We present an eye tracking system that works with regular webcams. We base our work on open source CVC Eye Tracker [7] and we propose a number of improvements and a novel gaze estimation method. The new method uses features extracted from iris segmentation and it does not fall into the traditional categorization of appearance–based/model–based methods. Our experiments show that our approach reduces the gaze estimation errors by 34 % in the horizontal direction and by 12 % in the vertical direction compared to the baseline system. |
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Santiago de Compostela; June 2015 |
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Springer International Publishing |
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LNCS |
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ISSN |
0302-9743 |
ISBN |
978-3-319-19389-2 |
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IbPRIA |
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MV;SIAI |
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no |
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Call Number |
Admin @ si @ FLV2015a |
Serial |
2646 |
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Author |
Fernando Vilariño; Ludmila I. Kuncheva; Petia Radeva |
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Title |
ROC curves and video analysis optimization in intestinal capsule endoscopy |
Type |
Journal Article |
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Year |
2006 |
Publication |
Pattern Recognition Letters |
Abbreviated Journal |
PRL |
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Volume |
27 |
Issue |
8 |
Pages |
875–881 |
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Keywords |
ROC curves; Classification; Classifiers ensemble; Detection of intestinal contractions; Imbalanced classes; Wireless capsule endoscopy |
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Abstract |
Wireless capsule endoscopy involves inspection of hours of video material by a highly qualified professional. Time episodes corresponding to intestinal contractions, which are of interest to the physician constitute about 1% of the video. The problem is to label automatically time episodes containing contractions so that only a fraction of the video needs inspection. As the classes of contraction and non-contraction images in the video are largely imbalanced, ROC curves are used to optimize the trade-off between false positive and false negative rates. Classifier ensemble methods and simple classifiers were examined. Our results reinforce the claims from recent literature that classifier ensemble methods specifically designed for imbalanced problems have substantial advantages over simple classifiers and standard classifier ensembles. By using ROC curves with the bagging ensemble method the inspection time can be drastically reduced at the expense of a small fraction of missed contractions. |
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800 |
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MILAB;MV;SIAI |
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no |
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Call Number |
BCNPCL @ bcnpcl @ VKR2006; IAM @ iam @ VKR2006 |
Serial |
647 |
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Author |
Fernando Vilariño |
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Title |
A Machine Learning Approach for Intestinal Motility Assessment with Capsule Endoscopy |
Type |
Book Whole |
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Year |
2006 |
Publication |
PhD Thesis, Universitat Autonoma de Barcelona-CVC |
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Intestinal motility assessment with video capsule endoscopy arises as a novel and challenging clinical fieldwork. This technique is based on the analysis of the patterns of intestinal contractions obtained by labelling all the motility events present in a video provided by a capsule with a wireless micro-camera, which is ingested by the patient. However, the visual analysis of these video sequences presents several im- portant drawbacks, mainly related to both the large amount of time needed for the visualization process, and the low prevalence of intestinal contractions in video.
In this work we propose a machine learning system to automatically detect the intestinal contractions in video capsule endoscopy, driving a very useful but not fea- sible clinical routine into a feasible clinical procedure. Our proposal is divided into two different parts: The first part tackles the problem of the automatic detection of phasic contractions in capsule endoscopy videos. Phasic contractions are dynamic events spanning about 4-5 seconds, which show visual patterns with a high variability. Our proposal is based on a sequential design which involves the analysis of textural, color and blob features with powerful classifiers such as SVM. This approach appears to cope with two basic aims: the reduction of the imbalance rate of the data set, and the modular construction of the system, which adds the capability of including domain knowledge as new stages in the cascade. The second part of the current work tackles the problem of the automatic detection of tonic contractions. Tonic contrac- tions manifest in capsule endoscopy as a sustained pattern of the folds and wrinkles of the intestine, which may be prolonged for an undetermined span of time. Our proposal is based on the analysis of the wrinkle patterns, presenting a comparative study of diverse features and classification methods, and providing a set of appro- priate descriptors for their characterization. We provide a detailed analysis of the performance achieved by our system both in a qualitative and a quantitative way. |
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CVC (UAB) |
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Ph.D. thesis |
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Petia Radeva |
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84-933652-7-0 |
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800 |
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Notes |
MV;SIAI |
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no |
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Call Number |
Admin @ si @ Vil2006; IAM @ iam @ Vil2006 |
Serial |
738 |
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Author |
Stefan Ameling; Stephan Wirth; Dietrich Paulus; Gerard Lacey; Fernando Vilariño |
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Title |
Texture-based Polyp Detection in Colonoscopy |
Type |
Conference Article |
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Year |
2009 |
Publication |
Proc. BILDVERARBEITUNG FÜR DIE MEDIZIN |
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800 |
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MV;SIAI |
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no |
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Call Number |
fernando @ fernando @ |
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2428 |
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Author |
Robert Benavente; Laura Igual; Fernando Vilariño |
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Title |
Current Challenges in Computer Vision |
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Book Whole |
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2008 |
Publication |
Proccedings of the Third Internal Workshop |
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978-84-936529-0-6 |
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CVCRD |
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MILAB;CIC;SIAI |
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no |
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BCNPCL @ bcnpcl @ BIV2008 |
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1110 |
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Author |
Gloria Fernandez Esparrach; Jorge Bernal; Cristina Rodriguez de Miguel; Debora Gil; Fernando Vilariño; Henry Cordova; Cristina Sanchez Montes; I.Araujo ; Maria Lopez Ceron; J.Llach; F. Javier Sanchez |
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Title |
Colonic polyps are correctly identified by a computer vision method using wm-dova energy maps |
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Conference Article |
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2015 |
Publication |
Proceedings of 23 United European- UEG Week 2015 |
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UEG |
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Notes |
MV; IAM; 600.075;SIAI |
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no |
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Call Number |
Admin @ si @ FBR2015 |
Serial |
2732 |
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Author |
Debora Gil; Petia Radeva; Fernando Vilariño |
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Title |
Anisotropic Contour Completion |
Type |
Conference Article |
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Year |
2003 |
Publication |
Proceedings of the IEEE International Conference on Image Processing |
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In this paper we introduce a novel application of the diffusion tensor for anisotropic image processing. The Anisotropic Contour Completion (ACC) we suggest consists in extending the characteristic function of the open curve by means of a degenerated diffusion tensor that prevents any diffusion in the normal direction. We show that ACC is equivalent to a dilation with a continuous elliptic structural element that takes into account the local orientation of the contours to be closed. Experiments on contours extracted from real images show that ACC produces shapes able to adapt to any curve in an active contour framework. 1. |
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Barcelona, Spain |
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0-7803-7751-6 |
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IAM;MV;MILAB;SIAI |
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IAM @ iam @ GRV2003 |
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1539 |
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Author |
Joan M. Nuñez; Jorge Bernal; F. Javier Sanchez; Fernando Vilariño |
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Title |
Blood Vessel Characterization in Colonoscopy Images to Improve Polyp Localization |
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Conference Article |
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Year |
2013 |
Publication |
Proceedings of the International Conference on Computer Vision Theory and Applications |
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1 |
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162-171 |
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Colonoscopy; Blood vessel; Linear features; Valley detection |
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This paper presents an approach to mitigate the contribution of blood vessels to the energy image used at different tasks of automatic colonoscopy image analysis. This goal is achieved by introducing a characterization of endoluminal scene objects which allows us to differentiate between the trace of 2-dimensional visual objects,such as vessels, and shades from 3-dimensional visual objects, such as folds. The proposed characterization is based on the influence that the object shape has in the resulting visual feature, and it leads to the development of a blood vessel attenuation algorithm. A database consisting of manually labelled masks was built in order to test the performance of our method, which shows an encouraging success in blood vessel mitigation while keeping other structures intact. Moreover, by extending our method to the only available polyp localization
algorithm tested on a public database, blood vessel mitigation proved to have a positive influence on the overall performance. |
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Barcelona; February 2013 |
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SciTePress |
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800 |
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VISIGRAPP |
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MV; 600.054; 600.057;SIAI |
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no |
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Call Number |
IAM @ iam @ NBS2013 |
Serial |
2198 |
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Author |
Fernando Vilariño; Debora Gil; Petia Radeva |
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Title |
A Novel FLDA Formulation for Numerical Stability Analysis |
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Book Chapter |
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2004 |
Publication |
Recent Advances in Artificial Intelligence Research and Development |
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113 |
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77-84 |
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Supervised Learning; Linear Discriminant Analysis; Numerical Stability; Computer Vision |
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Fisher Linear Discriminant Analysis (FLDA) is one of the most popular techniques used in classification applying dimensional reduction. The numerical scheme involves the inversion of the within-class scatter matrix, which makes FLDA potentially ill-conditioned when it becomes singular. In this paper we present a novel explicit formulation of FLDA in terms of the eccentricity ratio and eigenvector orientations of the within-class scatter matrix. An analysis of this function will characterize those situations where FLDA response is not reliable because of numerical instability. This can solve common situations of poor classification performance in computer vision. |
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IOS Press |
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J. Vitrià, P. Radeva and I. Aguiló |
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978-1-58603-466-5 |
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MV;IAM;MILAB;SIAI |
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IAM @ iam @ VGR2004 |
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1663 |
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Fernando Vilariño; Dimosthenis Karatzas; Marcos Catalan; Alberto Valcarcel |
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Title |
An horizon for the Public Library as a place for innovation and creativity. The Library Living Lab in Volpelleres |
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2015 |
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The White Book on Public Library Network from Diputació de Barcelona |
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MV; DAG;SIAI |
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Admin @ si @VKC2015 |
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2798 |
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Author |
Fernando Vilariño |
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Title |
Unveiling the Social Impact of AI |
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Conference Article |
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2020 |
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Workshop at Digital Living Lab Days Conference |
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September 2020 |
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MV; DAG; 600.121; 600.140;SIAI |
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Admin @ si @ Vil2020 |
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3459 |
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Author |
Fernando Vilariño |
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Title |
Public Libraries Exploring how technology transforms the cultural experience of people |
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2019 |
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Workshop on Social Impact of AI. Open Living Lab Days Conference. |
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Thessaloniki; Grecia; September 2019 |
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MV; DAG; 600.140; 600.121;SIAI |
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Admin @ si @ Vil2019b |
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3458 |
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Gloria Fernandez Esparrach; Jorge Bernal; Cristina Rodriguez de Miguel; Debora Gil; Fernando Vilariño; Henry Cordova; Cristina Sanchez Montes; Isis Ara |
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Title |
Utilidad de la visión por computador para la localización de pólipos pequeños y planos |
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Conference Article |
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2016 |
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XIX Reunión Nacional de la Asociación Española de Gastroenterología, Gastroenterology Hepatology |
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39 |
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2 |
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94 |
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Madrid (Spain) |
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AEGASTRO |
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Notes |
MV; IAM; 600.097;SIAI |
Approved |
no |
|
| |
Call Number |
Admin @ si @FBR2016 |
Serial |
2779 |
|
| Permanent link to this record |
