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	Author	David Roche; Debora Gil; Jesus Giraldo
	Title	Mechanistic analysis of the function of agonists and allosteric modulators: Reconciling two-state and operational models			Type	Journal Article
	Year	2013	Publication	British Journal of Pharmacology	Abbreviated Journal	BJP
	Volume	169	Issue	6	Pages	1189-202
	Keywords
	Abstract	Two-state and operational models of both agonism and allosterism are compared to identify and characterize common pharmacological parameters. To account for the receptor-dependent basal response, constitutive receptor activity is considered in the operational models. By arranging two-state models as the fraction of active receptors and operational models as the fractional response relative to the maximum effect of the system, a one-by-one correspondence between parameters is found. The comparative analysis allows a better understanding of complex allosteric interactions. In particular, the inclusion of constitutive receptor activity in the operational model of allosterism allows the characterization of modulators able to lower the basal response of the system; that is, allosteric modulators with negative intrinsic efficacy. Theoretical simulations and overall goodness of fit of the models to simulated data suggest that it is feasible to apply the models to experimental data and constitute one step forward in receptor theory formalism.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.044; 605.203			Approved	no
	Call Number	IAM @ iam @ RGG2013b			Serial	2195
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	Author	Joan M. Nuñez; Debora Gil; Fernando Vilariño
	Title	Finger joint characterization from X-ray images for rheymatoid arthritis assessment			Type	Conference Article
	Year	2013	Publication	6th International Conference on Biomedical Electronics and Devices	Abbreviated Journal
	Volume		Issue		Pages	288-292
	Keywords	Rheumatoid Arthritis; X-Ray; Hand Joint; Sclerosis; Sharp Van der Heijde
	Abstract	In this study we propose amodular systemfor automatic rheumatoid arthritis assessment which provides a joint space width measure. A hand joint model is proposed based on the accurate analysis of a X-ray finger joint image sample set. This model shows that the sclerosis and the lower bone are the main necessary features in order to perform a proper finger joint characterization. We propose sclerosis and lower bone detection methods as well as the experimental setup necessary for its performance assessment. Our characterization is used to propose and compute a joint space width score which is shown to be related to the different degrees of arthritis. This assertion is verified by comparing our proposed score with Sharp Van der Heijde score, confirming that the lower our score is the more advanced is the patient affection.
	Address	Barcelona; February 2013
	Corporate Author				Thesis
	Publisher	SciTePress	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	BIODEVICES
	Notes	IAM;MV; 600.057; 600.054;SIAI			Approved	no
	Call Number	IAM @ iam @ NGV2013			Serial	2196
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	Author	Joan M. Nuñez; Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Blood Vessel Characterization in Colonoscopy Images to Improve Polyp Localization			Type	Conference Article
	Year	2013	Publication	Proceedings of the International Conference on Computer Vision Theory and Applications	Abbreviated Journal
	Volume	1	Issue		Pages	162-171
	Keywords	Colonoscopy; Blood vessel; Linear features; Valley detection
	Abstract	This paper presents an approach to mitigate the contribution of blood vessels to the energy image used at different tasks of automatic colonoscopy image analysis. This goal is achieved by introducing a characterization of endoluminal scene objects which allows us to differentiate between the trace of 2-dimensional visual objects,such as vessels, and shades from 3-dimensional visual objects, such as folds. The proposed characterization is based on the influence that the object shape has in the resulting visual feature, and it leads to the development of a blood vessel attenuation algorithm. A database consisting of manually labelled masks was built in order to test the performance of our method, which shows an encouraging success in blood vessel mitigation while keeping other structures intact. Moreover, by extending our method to the only available polyp localization algorithm tested on a public database, blood vessel mitigation proved to have a positive influence on the overall performance.
	Address	Barcelona; February 2013
	Corporate Author				Thesis
	Publisher	SciTePress	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	VISIGRAPP
	Notes	MV; 600.054; 600.057;SIAI			Approved	no
	Call Number	IAM @ iam @ NBS2013			Serial	2198
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	Author	Angel Sappa; Jordi Vitria
	Title	Multimodal Interaction in Image and Video Applications			Type	Book Whole
	Year	2013	Publication	Multimodal Interaction in Image and Video Applications	Abbreviated Journal
	Volume	48	Issue		Pages
	Keywords
	Abstract	Book Series Intelligent Systems Reference Library
	Address
	Corporate Author				Thesis
	Publisher	Springer Berlin Heidelberg	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1868-4394	ISBN	978-3-642-35931-6	Medium
	Area		Expedition		Conference
	Notes	ADAS; OR;MV			Approved	no
	Call Number	Admin @ si @ SaV2013			Serial	2199
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	Author	Jiaolong Xu; David Vazquez; Antonio Lopez; Javier Marin; Daniel Ponsa
	Title	Learning a Multiview Part-based Model in Virtual World for Pedestrian Detection			Type	Conference Article
	Year	2013	Publication	IEEE Intelligent Vehicles Symposium	Abbreviated Journal
	Volume		Issue		Pages	467 - 472
	Keywords	Pedestrian Detection; Virtual World; Part based
	Abstract	State-of-the-art deformable part-based models based on latent SVM have shown excellent results on human detection. In this paper, we propose to train a multiview deformable part-based model with automatically generated part examples from virtual-world data. The method is efficient as: (i) the part detectors are trained with precisely extracted virtual examples, thus no latent learning is needed, (ii) the multiview pedestrian detector enhances the performance of the pedestrian root model, (iii) a top-down approach is used for part detection which reduces the searching space. We evaluate our model on Daimler and Karlsruhe Pedestrian Benchmarks with publicly available Caltech pedestrian detection evaluation framework and the result outperforms the state-of-the-art latent SVM V4.0, on both average miss rate and speed (our detector is ten times faster).
	Address	Gold Coast; Australia; June 2013
	Corporate Author				Thesis
	Publisher	IEEE	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1931-0587	ISBN	978-1-4673-2754-1	Medium
	Area		Expedition		Conference	IV
	Notes	ADAS; 600.054; 600.057			Approved	no
	Call Number	XVL2013; ADAS @ adas @ xvl2013a			Serial	2214
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	Author	Marina Alberti
	Title	Detection and Alignment of Vascular Structures in Intravascular Ultrasound using Pattern Recognition Techniques			Type	Book Whole
	Year	2013	Publication	PhD Thesis, Universitat de Barcelona-CVC	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	In this thesis, several methods for the automatic analysis of Intravascular Ultrasound (IVUS) sequences are presented, aimed at assisting physicians in the diagnosis, the assessment of the intervention and the monitoring of the patients with coronary disease. The basis for the developed frameworks are machine learning, pattern recognition and image processing techniques. First, a novel approach for the automatic detection of vascular bifurcations in IVUS is presented. The task is addressed as a binary classication problem (identifying bifurcation and non-bifurcation angular sectors in the sequence images). The multiscale stacked sequential learning algorithm is applied, to take into account the spatial and temporal context in IVUS sequences, and the results are rened using a-priori information about branching dimensions and geometry. The achieved performance is comparable to intra- and inter-observer variability. Then, we propose a novel method for the automatic non-rigid alignment of IVUS sequences of the same patient, acquired at dierent moments (before and after percutaneous coronary intervention, or at baseline and follow-up examinations). The method is based on the description of the morphological content of the vessel, obtained by extracting temporal morphological proles from the IVUS acquisitions, by means of methods for segmentation, characterization and detection in IVUS. A technique for non-rigid sequence alignment – the Dynamic Time Warping algorithm - is applied to the proles and adapted to the specic clinical problem. Two dierent robust strategies are proposed to address the partial overlapping between frames of corresponding sequences, and a regularization term is introduced to compensate for possible errors in the prole extraction. The benets of the proposed strategy are demonstrated by extensive validation on synthetic and in-vivo data. The results show the interest of the proposed non-linear alignment and the clinical value of the method. Finally, a novel automatic approach for the extraction of the luminal border in IVUS images is presented. The method applies the multiscale stacked sequential learning algorithm and extends it to 2-D+T, in a rst classication phase (the identi- cation of lumen and non-lumen regions of the images), while an active contour model is used in a second phase, to identify the lumen contour. The method is extended to the longitudinal dimension of the sequences and it is validated on a challenging data-set.
	Address	Barcelona
	Corporate Author				Thesis	Ph.D. thesis
	Publisher	Ediciones Graficas Rey	Place of Publication		Editor	Simone Balocco;Petia Radeva
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB			Approved	no
	Call Number	Admin @ si @ Alb2013			Serial	2215
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	Author	Patricia Marquez; Debora Gil; Aura Hernandez-Sabate; Daniel Kondermann
	Title	When Is A Confidence Measure Good Enough?			Type	Conference Article
	Year	2013	Publication	9th International Conference on Computer Vision Systems	Abbreviated Journal
	Volume	7963	Issue		Pages	344-353
	Keywords	Optical flow, confidence measure, performance evaluation
	Abstract	Confidence estimation has recently become a hot topic in image processing and computer vision.Yet, several definitions exist of the term “confidence” which are sometimes used interchangeably. This is a position paper, in which we aim to give an overview on existing definitions, thereby clarifying the meaning of the used terms to facilitate further research in this field. Based on these clarifications, we develop a theory to compare confidence measures with respect to their quality.
	Address	St Petersburg; Russia; July 2013
	Corporate Author				Thesis
	Publisher	Springer Link	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-39401-0	Medium
	Area		Expedition		Conference	ICVS
	Notes	IAM;ADAS; 600.044; 600.057; 600.060; 601.145			Approved	no
	Call Number	IAM @ iam @ MGH2013a			Serial	2218
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	Author	David Vazquez; Jiaolong Xu; Sebastian Ramos; Antonio Lopez; Daniel Ponsa
	Title	Weakly Supervised Automatic Annotation of Pedestrian Bounding Boxes			Type	Conference Article
	Year	2013	Publication	CVPR Workshop on Ground Truth – What is a good dataset?	Abbreviated Journal
	Volume		Issue		Pages	706 - 711
	Keywords	Pedestrian Detection; Domain Adaptation
	Abstract	Among the components of a pedestrian detector, its trained pedestrian classifier is crucial for achieving the desired performance. The initial task of the training process consists in collecting samples of pedestrians and background, which involves tiresome manual annotation of pedestrian bounding boxes (BBs). Thus, recent works have assessed the use of automatically collected samples from photo-realistic virtual worlds. However, learning from virtual-world samples and testing in real-world images may suffer the dataset shift problem. Accordingly, in this paper we assess an strategy to collect samples from the real world and retrain with them, thus avoiding the dataset shift, but in such a way that no BBs of real-world pedestrians have to be provided. In particular, we train a pedestrian classifier based on virtual-world samples (no human annotation required). Then, using such a classifier we collect pedestrian samples from real-world images by detection. After, a human oracle rejects the false detections efficiently (weak annotation). Finally, a new classifier is trained with the accepted detections. We show that this classifier is competitive with respect to the counterpart trained with samples collected by manually annotating hundreds of pedestrian BBs.
	Address	Portland; Oregon; June 2013
	Corporate Author				Thesis
	Publisher	IEEE	Place of Publication		Editor
	Language	English	Summary Language	English	Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CVPRW
	Notes	ADAS; 600.054; 600.057; 601.217			Approved	no
	Call Number	ADAS @ adas @ VXR2013a			Serial	2219
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	Author	Jiaolong Xu; David Vazquez; Sebastian Ramos; Antonio Lopez; Daniel Ponsa
	Title	Adapting a Pedestrian Detector by Boosting LDA Exemplar Classifiers			Type	Conference Article
	Year	2013	Publication	CVPR Workshop on Ground Truth – What is a good dataset?	Abbreviated Journal
	Volume		Issue		Pages	688 - 693
	Keywords	Pedestrian Detection; Domain Adaptation
	Abstract	Training vision-based pedestrian detectors using synthetic datasets (virtual world) is a useful technique to collect automatically the training examples with their pixel-wise ground truth. However, as it is often the case, these detectors must operate in real-world images, experiencing a significant drop of their performance. In fact, this effect also occurs among different real-world datasets, i.e. detectors' accuracy drops when the training data (source domain) and the application scenario (target domain) have inherent differences. Therefore, in order to avoid this problem, it is required to adapt the detector trained with synthetic data to operate in the real-world scenario. In this paper, we propose a domain adaptation approach based on boosting LDA exemplar classifiers from both virtual and real worlds. We evaluate our proposal on multiple real-world pedestrian detection datasets. The results show that our method can efficiently adapt the exemplar classifiers from virtual to real world, avoiding drops in average precision over the 15%.
	Address	Portland; oregon; June 2013
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language	English	Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CVPRW
	Notes	ADAS; 600.054; 600.057; 601.217			Approved	yes
	Call Number	XVR2013; ADAS @ adas @ xvr2013a			Serial	2220
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	Author	Francisco Javier Orozco; Ognjen Rudovic; Jordi Gonzalez; Maja Pantic
	Title	Hierarchical On-line Appearance-Based Tracking for 3D Head Pose, Eyebrows, Lips, Eyelids and Irises			Type	Journal Article
	Year	2013	Publication	Image and Vision Computing	Abbreviated Journal	IMAVIS
	Volume	31	Issue	4	Pages	322-340
	Keywords	On-line appearance models; Levenberg–Marquardt algorithm; Line-search optimization; 3D face tracking; Facial action tracking; Eyelid tracking; Iris tracking
	Abstract	In this paper, we propose an On-line Appearance-Based Tracker (OABT) for simultaneous tracking of 3D head pose, lips, eyebrows, eyelids and irises in monocular video sequences. In contrast to previously proposed tracking approaches, which deal with face and gaze tracking separately, our OABT can also be used for eyelid and iris tracking, as well as 3D head pose, lips and eyebrows facial actions tracking. Furthermore, our approach applies an on-line learning of changes in the appearance of the tracked target. Hence, the prior training of appearance models, which usually requires a large amount of labeled facial images, is avoided. Moreover, the proposed method is built upon a hierarchical combination of three OABTs, which are optimized using a Levenberg–Marquardt Algorithm (LMA) enhanced with line-search procedures. This, in turn, makes the proposed method robust to changes in lighting conditions, occlusions and translucent textures, as evidenced by our experiments. Finally, the proposed method achieves head and facial actions tracking in real-time.
	Address
	Corporate Author				Thesis
	Publisher	Elsevier	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ISE; 605.203; 302.012; 302.018; 600.049			Approved	no
	Call Number	ORG2013			Serial	2221
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	Author	Marc Castello; Jordi Gonzalez; Ariel Amato; Pau Baiget; Carles Fernandez; Josep M. Gonfaus; Ramon Mollineda; Marco Pedersoli; Nicolas Perez de la Blanca; Xavier Roca
	Title	Exploiting Multimodal Interaction Techniques for Video-Surveillance			Type	Book Chapter
	Year	2013	Publication	Multimodal Interaction in Image and Video Applications Intelligent Systems Reference Library	Abbreviated Journal
	Volume	48	Issue	8	Pages	135-151
	Keywords
	Abstract	In this paper we present an example of a video surveillance application that exploits Multimodal Interactive (MI) technologies. The main objective of the so-called VID-Hum prototype was to develop a cognitive artificial system for both the detection and description of a particular set of human behaviours arising from real-world events. The main procedure of the prototype described in this chapter entails: (i) adaptation, since the system adapts itself to the most common behaviours (qualitative data) inferred from tracking (quantitative data) thus being able to recognize abnormal behaviors; (ii) feedback, since an advanced interface based on Natural Language understanding allows end-users the communicationwith the prototype by means of conceptual sentences; and (iii) multimodality, since a virtual avatar has been designed to describe what is happening in the scene, based on those textual interpretations generated by the prototype. Thus, the MI methodology has provided an adequate framework for all these cooperating processes.
	Address
	Corporate Author				Thesis
	Publisher	Springer Berlin Heidelberg	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1868-4394	ISBN	978-3-642-35931-6	Medium
	Area		Expedition		Conference
	Notes	ISE; 605.203; 600.049			Approved	no
	Call Number	CGA2013			Serial	2222
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	Author	David Aldavert; Marçal Rusiñol; Ricardo Toledo; Josep Llados
	Title	Integrating Visual and Textual Cues for Query-by-String Word Spotting			Type	Conference Article
	Year	2013	Publication	12th International Conference on Document Analysis and Recognition	Abbreviated Journal
	Volume		Issue		Pages	511 - 515
	Keywords
	Abstract	In this paper, we present a word spotting framework that follows the query-by-string paradigm where word images are represented both by textual and visual representations. The textual representation is formulated in terms of character $n$-grams while the visual one is based on the bag-of-visual-words scheme. These two representations are merged together and projected to a sub-vector space. This transform allows to, given a textual query, retrieve word instances that were only represented by the visual modality. Moreover, this statistical representation can be used together with state-of-the-art indexation structures in order to deal with large-scale scenarios. The proposed method is evaluated using a collection of historical documents outperforming state-of-the-art performances.
	Address	Washington; USA; August 2013
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1520-5363	ISBN		Medium
	Area		Expedition		Conference	ICDAR
	Notes	DAG; ADAS; 600.045; 600.055; 600.061			Approved	no
	Call Number	Admin @ si @ ART2013			Serial	2224
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	Author	German Ros; J. Guerrero; Angel Sappa; Antonio Lopez
	Title	VSLAM pose initialization via Lie groups and Lie algebras optimization			Type	Conference Article
	Year	2013	Publication	Proceedings of IEEE International Conference on Robotics and Automation	Abbreviated Journal
	Volume		Issue		Pages	5740 - 5747
	Keywords	SLAM
	Abstract	We present a novel technique for estimating initial 3D poses in the context of localization and Visual SLAM problems. The presented approach can deal with noise, outliers and a large amount of input data and still performs in real time in a standard CPU. Our method produces solutions with an accuracy comparable to those produced by RANSAC but can be much faster when the percentage of outliers is high or for large amounts of input data. On the current work we propose to formulate the pose estimation as an optimization problem on Lie groups, considering their manifold structure as well as their associated Lie algebras. This allows us to perform a fast and simple optimization at the same time that conserve all the constraints imposed by the Lie group SE(3). Additionally, we present several key design concepts related with the cost function and its Jacobian; aspects that are critical for the good performance of the algorithm.
	Address	Karlsruhe; Germany; May 2013
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1050-4729	ISBN	978-1-4673-5641-1	Medium
	Area		Expedition		Conference	ICRA
	Notes	ADAS; 600.054; 600.055; 600.057			Approved	no
	Call Number	Admin @ si @ RGS2013a; ADAS @ adas @			Serial	2225
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	Author	Ferran Diego; Joan Serrat; Antonio Lopez
	Title	Joint spatio-temporal alignment of sequences			Type	Journal Article
	Year	2013	Publication	IEEE Transactions on Multimedia	Abbreviated Journal	TMM
	Volume	15	Issue	6	Pages	1377-1387
	Keywords	video alignment
	Abstract	Video alignment is important in different areas of computer vision such as wide baseline matching, action recognition, change detection, video copy detection and frame dropping prevention. Current video alignment methods usually deal with a relatively simple case of fixed or rigidly attached cameras or simultaneous acquisition. Therefore, in this paper we propose a joint video alignment for bringing two video sequences into a spatio-temporal alignment. Specifically, the novelty of the paper is to formulate the video alignment to fold the spatial and temporal alignment into a single alignment framework. This simultaneously satisfies a frame-correspondence and frame-alignment similarity; exploiting the knowledge among neighbor frames by a standard pairwise Markov random field (MRF). This new formulation is able to handle the alignment of sequences recorded at different times by independent moving cameras that follows a similar trajectory, and also generalizes the particular cases that of fixed geometric transformation and/or linear temporal mapping. We conduct experiments on different scenarios such as sequences recorded simultaneously or by moving cameras to validate the robustness of the proposed approach. The proposed method provides the highest video alignment accuracy compared to the state-of-the-art methods on sequences recorded from vehicles driving along the same track at different times.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1520-9210	ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS			Approved	no
	Call Number	Admin @ si @ DSL2013; ADAS @ adas @			Serial	2228
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	Author	Bogdan Raducanu; Fadi Dornaika
	Title	Texture-independent recognition of facial expressions in image snapshots and videos			Type	Journal Article
	Year	2013	Publication	Machine Vision and Applications	Abbreviated Journal	MVA
	Volume	24	Issue	4	Pages	811-820
	Keywords
	Abstract	This paper addresses the static and dynamic recognition of basic facial expressions. It has two main contributions. First, we introduce a view- and texture-independent scheme that exploits facial action parameters estimated by an appearance-based 3D face tracker. We represent the learned facial actions associated with different facial expressions by time series. Second, we compare this dynamic scheme with a static one based on analyzing individual snapshots and show that the former performs better than the latter. We provide evaluations of performance using three subspace learning techniques: linear discriminant analysis, non-parametric discriminant analysis and support vector machines.
	Address
	Corporate Author				Thesis
	Publisher	Springer-Verlag	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0932-8092	ISBN		Medium
	Area		Expedition		Conference
	Notes	OR; 600.046; 605.203;MV			Approved	no
	Call Number	Admin @ si @ RaD2013			Serial	2230
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