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	Author	Carolina Malagelada; F.De Lorio; Santiago Segui; S. Mendez; Michal Drozdzal; Jordi Vitria; Petia Radeva; J.Santos; Anna Accarino; Juan R. Malagelada; Fernando Azpiroz
	Title	Functional gut disorders or disordered gut function? Small bowel dysmotility evidenced by an original technique			Type	Journal Article
	Year	2012	Publication	Neurogastroenterology & Motility	Abbreviated Journal	NEUMOT
	Volume	24	Issue	3	Pages	223-230
	Keywords	capsule endoscopy;computer vision analysis;machine learning technique;small bowel motility
	Abstract	JCR Impact Factor 2010: 3.349 Background This study aimed to determine the proportion of cases with abnormal intestinal motility among patients with functional bowel disorders. To this end, we applied an original method, previously developed in our laboratory, for analysis of endoluminal images obtained by capsule endoscopy. This novel technology is based on computer vision and machine learning techniques. Methods The endoscopic capsule (Pillcam SB1; Given Imaging, Yokneam, Israel) was administered to 80 patients with functional bowel disorders and 70 healthy subjects. Endoluminal image analysis was performed with a computer vision program developed for the evaluation of contractile events (luminal occlusions and radial wrinkles), non-contractile patterns (open tunnel and smooth wall patterns), type of content (secretions, chyme) and motion of wall and contents. Normality range and discrimination of abnormal cases were established by a machine learning technique. Specifically, an iterative classifier (one-class support vector machine) was applied in a random population of 50 healthy subjects as a training set and the remaining subjects (20 healthy subjects and 80 patients) as a test set. Key Results The classifier identified as abnormal 29% of patients with functional diseases of the bowel (23 of 80), and as normal 97% of healthy subjects (68 of 70) (P < 0.05 by chi-squared test). Patients identified as abnormal clustered in two groups, which exhibited either a hyper- or a hypodynamic motility pattern. The motor behavior was unrelated to clinical features. Conclusions & Inferences With appropriate methodology, abnormal intestinal motility can be demonstrated in a significant proportion of patients with functional bowel disorders, implying a pathologic disturbance of gut physiology.
	Address
	Corporate Author				Thesis
	Publisher	Wiley Online Library	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB; OR; MV			Approved	no
	Call Number	Admin @ si @ MLS2012			Serial	1830
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	Author	Theo Gevers; Arjan Gijsenij; Joost Van de Weijer; J.M. Geusebroek
	Title	Color in Computer Vision: Fundamentals and Applications			Type	Book Whole
	Year	2012	Publication	Color in Computer Vision: Fundamentals and Applications	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher	The Wiley-IS&T Series in Imaging Science and Technology	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-0-470-89084-4	Medium
	Area		Expedition		Conference
	Notes	ALTRES;ISE			Approved	no
	Call Number	Admin @ si @ GGG2012a			Serial	2068
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	Author	Marina Alberti; Simone Balocco; Xavier Carrillo; Josepa Mauri; Petia Radeva
	Title	Automatic Non-Rigid Temporal Alignment of IVUS Sequences			Type	Conference Article
	Year	2012	Publication	15th International Conference on Medical Image Computing and Computer Assisted Intervention	Abbreviated Journal
	Volume	1	Issue		Pages	642-650
	Keywords
	Abstract	Clinical studies on atherosclerosis regression/progression performed by Intravascular Ultrasound analysis require the alignment of pullbacks of the same patient before and after clinical interventions. In this paper, a methodology for the automatic alignment of IVUS sequences based on the Dynamic Time Warping technique is proposed. The method is adapted to the specific IVUS alignment task by applying the non-rigid alignment technique to multidimensional morphological signals, and by introducing a sliding window approach together with a regularization term. To show the effectiveness of our method, an extensive validation is performed both on synthetic data and in-vivo IVUS sequences. The proposed method is robust to stent deployment and post dilation surgery and reaches an alignment error of approximately 0.7 mm for in-vivo data, which is comparable to the inter-observer variability.
	Address	Nice, France
	Corporate Author				Thesis
	Publisher	Springer-Verlag Berlin, Heidelberg	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-642-33414-6	Medium
	Area		Expedition		Conference	MICCAI
	Notes	MILAB			Approved	no
	Call Number	Admin @ si @ ABC2012			Serial	2168
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	Author	Patricia Marquez; Debora Gil ; Aura Hernandez-Sabate
	Title	Error Analysis for Lucas-Kanade Based Schemes			Type	Conference Article
	Year	2012	Publication	9th International Conference on Image Analysis and Recognition	Abbreviated Journal
	Volume	7324	Issue	I	Pages	184-191
	Keywords	Optical flow, Confidence measure, Lucas-Kanade, Cardiac Magnetic Resonance
	Abstract	Optical flow is a valuable tool for motion analysis in medical imaging sequences. A reliable application requires determining the accuracy of the computed optical flow. This is a main challenge given the absence of ground truth in medical sequences. This paper presents an error analysis of Lucas-Kanade schemes in terms of intrinsic design errors and numerical stability of the algorithm. Our analysis provides a confidence measure that is naturally correlated to the accuracy of the flow field. Our experiments show the higher predictive value of our confidence measure compared to existing measures.
	Address	Aveiro, Portugal
	Corporate Author				Thesis
	Publisher	Springer-Verlag Berlin Heidelberg	Place of Publication		Editor
	Language	english	Summary Language		Original Title
	Series Editor	Campilho, Aurélio and Kamel, Mohamed	Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-31294-6	Medium
	Area		Expedition		Conference	ICIAR
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ MGH2012a			Serial	1899
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	Author	Pierluigi Casale; Oriol Pujol; Petia Radeva
	Title	Personalization and User Verification in Wearable Systems using Biometric Walking Patterns			Type	Journal Article
	Year	2012	Publication	Personal and Ubiquitous Computing	Abbreviated Journal	PUC
	Volume	16	Issue	5	Pages	563-580
	Keywords
	Abstract	In this article, a novel technique for user’s authentication and verification using gait as a biometric unobtrusive pattern is proposed. The method is based on a two stages pipeline. First, a general activity recognition classifier is personalized for an specific user using a small sample of her/his walking pattern. As a result, the system is much more selective with respect to the new walking pattern. A second stage verifies whether the user is an authorized one or not. This stage is defined as a one-class classification problem. In order to solve this problem, a four-layer architecture is built around the geometric concept of convex hull. This architecture allows to improve robustness to outliers, modeling non-convex shapes, and to take into account temporal coherence information. Two different scenarios are proposed as validation with two different wearable systems. First, a custom high-performance wearable system is built and used in a free environment. A second dataset is acquired from an Android-based commercial device in a ‘wild’ scenario with rough terrains, adversarial conditions, crowded places and obstacles. Results on both systems and datasets are very promising, reducing the verification error rates by an order of magnitude with respect to the state-of-the-art technologies.
	Address
	Corporate Author				Thesis
	Publisher	Springer-Verlag	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1617-4909	ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ CPR2012			Serial	1706
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	Author	Patricia Marquez;Debora Gil;Aura Hernandez-Sabate
	Title	A Complete Confidence Framework for Optical Flow			Type	Conference Article
	Year	2012	Publication	12th European Conference on Computer Vision – Workshops and Demonstrations	Abbreviated Journal
	Volume	7584	Issue	2	Pages	124-133
	Keywords	Optical flow, confidence measures, sparsification plots, error prediction plots
	Abstract	Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations.
	Address
	Corporate Author				Thesis
	Publisher	Springer-Verlag	Place of Publication	Florence, Italy, October 7-13, 2012	Editor	Andrea Fusiello, Vittorio Murino ,Rita Cucchiara
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-642-33867-0	Medium
	Area		Expedition		Conference	ECCVW
	Notes	IAM;ADAS;			Approved	no
	Call Number	IAM @ iam @ MGH2012b			Serial	1991
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	Author	Jaume Gibert; Ernest Valveny; Horst Bunke; Alicia Fornes
	Title	On the Correlation of Graph Edit Distance and L1 Distance in the Attribute Statistics Embedding Space			Type	Conference Article
	Year	2012	Publication	Structural, Syntactic, and Statistical Pattern Recognition, Joint IAPR International Workshop	Abbreviated Journal
	Volume	7626	Issue		Pages	135-143
	Keywords
	Abstract	Graph embeddings in vector spaces aim at assigning a pattern vector to every graph so that the problems of graph classification and clustering can be solved by using data processing algorithms originally developed for statistical feature vectors. An important requirement graph features should fulfil is that they reproduce as much as possible the properties among objects in the graph domain. In particular, it is usually desired that distances between pairs of graphs in the graph domain closely resemble those between their corresponding vectorial representations. In this work, we analyse relations between the edit distance in the graph domain and the L1 distance of the attribute statistics based embedding, for which good classification performance has been reported on various datasets. We show that there is actually a high correlation between the two kinds of distances provided that the corresponding parameter values that account for balancing the weight between node and edge based features are properly selected.
	Address
	Corporate Author				Thesis
	Publisher	Springer-Berlag, Berlin	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-642-34165-6	Medium
	Area		Expedition		Conference	SSPR&SPR
	Notes	DAG			Approved	no
	Call Number	Admin @ si @ GVB2012c			Serial	2167
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	Author	Francesc Carreras; Jaume Garcia; Debora Gil; Sandra Pujadas; Chi ho Lion; R.Suarez-Arias; R.Leta; Xavier Alomar; Manuel Ballester; Guillem Pons-Llados
	Title	Left ventricular torsion and longitudinal shortening: two fundamental components of myocardial mechanics assessed by tagged cine-MRI in normal subjects			Type	Journal Article
	Year	2012	Publication	International Journal of Cardiovascular Imaging	Abbreviated Journal	IJCI
	Volume	28	Issue	2	Pages	273-284
	Keywords	Magnetic resonance imaging (MRI); Tagging MRI; Cardiac mechanics; Ventricular torsion
	Abstract	Cardiac magnetic resonance imaging (Cardiac MRI) has become a gold standard diagnostic technique for the assessment of cardiac mechanics, allowing the non-invasive calculation of left ventric- ular long axis longitudinal shortening (LVLS) and absolute myocardial torsion (AMT) between basal and apical left ventricular slices, a movement directly related to the helicoidal anatomic disposition of the myocardial fibers. The aim of this study is to determine AMT and LVLS behaviour and normal values from a group of healthy subjects. A group of 21 healthy volunteers (15 males) (age: 23–55 y.o., mean:30.7 ± 7.5) were prospectively included in an obser- vational study by Cardiac MRI. Left ventricular rotation (degrees) was calculated by custom-made software (Harmonic Phase Flow) in consecutive LV short axis planes tagged cine-MRI sequences. AMT was determined from the difference between basal and apical planes LV rotations. LVLS (%) was determined from the LV longitudinal and horizontal axis cine-MRI images. All the 21 cases studied were interpretable, although in three cases the value of the LV apical rotation could not be determined. The mean rotation of the basal and apical planes at end-systole were -3.71° ± 0.84° and 6.73° ± 1.69° (n:18) respectively, resulting in a LV mean AMT of 10.48° ± 1.63° (n:18). End-systolic mean LVLS was 19.07 ± 2.71%. Cardiac MRI allows for the calculation of AMT and LVLS, fundamental functional components of the ventricular twist mechanics conditioned, in turn, by the anatomical helical layout of the myocardial fibers. These values provide complementary information about systolic ventricular function in relation to the traditional parameters used in daily practice.
	Address
	Corporate Author				Thesis
	Publisher	Springer Netherlands	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1569-5794	ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ CGG2012			Serial	1496
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	Author	Fahad Shahbaz Khan; Joost Van de Weijer; Maria Vanrell
	Title	Modulating Shape Features by Color Attention for Object Recognition			Type	Journal Article
	Year	2012	Publication	International Journal of Computer Vision	Abbreviated Journal	IJCV
	Volume	98	Issue	1	Pages	49-64
	Keywords
	Abstract	Bag-of-words based image representation is a successful approach for object recognition. Generally, the subsequent stages of the process: feature detection,feature description, vocabulary construction and image representation are performed independent of the intentioned object classes to be detected. In such a framework, it was found that the combination of different image cues, such as shape and color, often obtains below expected results. This paper presents a novel method for recognizing object categories when using ultiple cues by separately processing the shape and color cues and combining them by modulating the shape features by category specific color attention. Color is used to compute bottom up and top-down attention maps. Subsequently, these color attention maps are used to modulate the weights of the shape features. In regions with higher attention shape features are given more weight than in regions with low attention. We compare our approach with existing methods that combine color and shape cues on five data sets containing varied importance of both cues, namely, Soccer (color predominance), Flower (color and hape parity), PASCAL VOC 2007 and 2009 (shape predominance) and Caltech-101 (color co-interference). The experiments clearly demonstrate that in all five data sets our proposed framework significantly outperforms existing methods for combining color and shape information.
	Address
	Corporate Author				Thesis
	Publisher	Springer Netherlands	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0920-5691	ISBN		Medium
	Area		Expedition		Conference
	Notes	CIC			Approved	no
	Call Number	Admin @ si @ KWV2012			Serial	1864
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	Author	Laura Igual; Joan Carles Soliva; Antonio Hernandez; Sergio Escalera; Oscar Vilarroya; Petia Radeva
	Title	A Supervised Graph-cut Deformable Model for Brain MRI Segmentation. Deformation models: tracking, animation and applications			Type	Book Chapter
	Year	2012	Publication	Computational Vision and Biomechanics	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher	Springer Netherlands	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-94-007-5445-4	Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ ISH2012b			Serial	2066
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	Author	Arnau Ramisa; David Aldavert; Shrihari Vasudevan; Ricardo Toledo; Ramon Lopez de Mantaras
	Title	Evaluation of Three Vision Based Object Perception Methods for a Mobile Robot			Type	Journal Article
	Year	2012	Publication	Journal of Intelligent and Robotic Systems	Abbreviated Journal	JIRC
	Volume	68	Issue	2	Pages	185-208
	Keywords
	Abstract	This paper addresses visual object perception applied to mobile robotics. Being able to perceive household objects in unstructured environments is a key capability in order to make robots suitable to perform complex tasks in home environments. However, finding a solution for this task is daunting: it requires the ability to handle the variability in image formation in a moving camera with tight time constraints. The paper brings to attention some of the issues with applying three state of the art object recognition and detection methods in a mobile robotics scenario, and proposes methods to deal with windowing/segmentation. Thus, this work aims at evaluating the state-of-the-art in object perception in an attempt to develop a lightweight solution for mobile robotics use/research in typical indoor settings.
	Address
	Corporate Author				Thesis
	Publisher	Springer Netherlands	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0921-0296	ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS			Approved	no
	Call Number	Admin @ si @ RAV2012			Serial	2150
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	Author	Sergio Vera; Debora Gil; Agnes Borras; F. Javier Sanchez; Frederic Perez; Marius G. Linguraru; Miguel Angel Gonzalez Ballester
	Title	Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs			Type	Book Chapter
	Year	2012	Publication	Workshop on Computational and Clinical Applications in Abdominal Imaging	Abbreviated Journal
	Volume	7029	Issue		Pages	223–230
	Keywords	medial manifolds, abdomen.
	Abstract	Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations.
	Address	Toronto; Canada;
	Corporate Author				Thesis
	Publisher	Springer Link	Place of Publication	Berlin	Editor	H. Yoshida et al
	Language	English	Summary Language	English	Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-28556-1	Medium
	Area		Expedition		Conference	ABDI
	Notes	IAM;MV			Approved	no
	Call Number	IAM @ iam @ VGB2012			Serial	1834
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	Author	Alberto Hidalgo; Ferran Poveda; Enric Marti;Debora Gil;Albert Andaluz; Francesc Carreras; Manuel Ballester
	Title	Evidence of continuous helical structure of the cardiac ventricular anatomy assessed by diffusion tensor imaging magnetic resonance multiresolution tractography			Type	Journal Article
	Year	2012	Publication	European Radiology	Abbreviated Journal	ECR
	Volume	3	Issue	1	Pages	361-362
	Keywords
	Abstract	Deep understanding of myocardial structure linking morphology and func- tion of the heart would unravel crucial knowledge for medical and surgical clinical procedures and studies. Diffusion tensor MRI provides a discrete measurement of the 3D arrangement of myocardial fibres by the observation of local anisotropic diffusion of water molecules in biological tissues. In this work, we present a multi- scale visualisation technique based on DT-MRI streamlining capable of uncovering additional properties of the architectural organisation of the heart. Methods and Materials: We selected the John Hopkins University (JHU) Canine Heart Dataset, where the long axis cardiac plane is aligned with the scanner’s Z- axis. Their equipment included a 4-element passed array coil emitting a 1.5 T. For DTI acquisition, a 3D-FSE sequence is apply. We used 200 seeds for full-scale tractography, while we applied a MIP mapping technique for simplified tractographic reconstruction. In this case, we reduced each DTI 3D volume dimensions by order- two magnitude before streamlining. Our simplified tractographic reconstruction method keeps the main geometric features of fibres, allowing for an easier identification of their global morphological disposition, including the ventricular basal ring. Moreover, we noticed a clearly visible helical disposition of the myocardial fibres, in line with the helical myocardial band ventricular structure described by Torrent-Guasp. Finally, our simplified visualisation with single tracts identifies the main segments of the helical ventricular architecture. DT-MRI makes possible the identification of a continuous helical architecture of the myocardial fibres, which validates Torrent-Guasp’s helical myocardial band ventricular anatomical model.
	Address	Viena, Austria
	Corporate Author				Thesis
	Publisher	Springer Link	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1869-4101	ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ HPM2012			Serial	1858
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	Author	Monica Piñol; Angel Sappa; Ricardo Toledo
	Title	MultiTable Reinforcement for Visual Object Recognition			Type	Conference Article
	Year	2012	Publication	4th International Conference on Signal and Image Processing	Abbreviated Journal
	Volume	221	Issue		Pages	469-480
	Keywords
	Abstract	This paper presents a bag of feature based method for visual object recognition. Our contribution is focussed on the selection of the best feature descriptor. It is implemented by using a novel multi-table reinforcement learning method that selects among five of classical descriptors (i.e., Spin, SIFT, SURF, C-SIFT and PHOW) the one that best describes each image. Experimental results and comparisons are provided showing the improvements achieved with the proposed approach.
	Address	Coimbatore, India
	Corporate Author				Thesis
	Publisher	Springer India	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	1876-1100	ISBN	978-81-322-0996-6	Medium
	Area		Expedition		Conference	ICSIP
	Notes	ADAS			Approved	no
	Call Number	Admin @ si @ PST2012			Serial	2157
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	Author	Sergio Escalera
	Title	Human Behavior Analysis From Depth Maps			Type	Conference Article
	Year	2012	Publication	7th Conference on Articulated Motion and Deformable Objects	Abbreviated Journal
	Volume	7378	Issue		Pages	282-292
	Keywords
	Abstract	Pose Recovery (PR) and Human Behavior Analysis (HBA) have been a main focus of interest from the beginnings of Computer Vision and Machine Learning. PR and HBA were originally addressed by the analysis of still images and image sequences. More recent strategies consisted of Motion Capture technology (MOCAP), based on the synchronization of multiple cameras in controlled environments; and the analysis of depth maps from Time-of-Flight (ToF) technology, based on range image recording from distance sensor measurements. Recently, with the appearance of the multi-modal RGBD information provided by the low cost Kinect \textsfTM sensor (from RGB and Depth, respectively), classical methods for PR and HBA have been redefined, and new strategies have been proposed. In this paper, the recent contributions and future trends of multi-modal RGBD data analysis for PR and HBA are reviewed and discussed.
	Address	Mallorca
	Corporate Author				Thesis
	Publisher	Springer Heidelberg	Place of Publication		Editor	F.J. Perales; R.B. Fisher; T.B. Moeslund
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-31566-4	Medium
	Area		Expedition		Conference	AMDO
	Notes	MILAB; HuPBA			Approved	no
	Call Number	Admin @ si @ Esc2012			Serial	2040
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