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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Reduction of Pattern Search Area in Colonoscopy Images by Merging Non-Informative Regions			Type	Conference Article
	Year	2010	Publication	28th Congreso Anual de la Sociedad Española de Ingeniería Biomédica	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	One of the first usual steps in pattern recognition schemas is image segmentation, in order to reduce the dimensionality of the problem and manage smaller quantity of data. In our case as we are pursuing real-time colon cancer polyp detection, this step is crucial. In this paper we present a non-informative region estimation algorithm that will let us discard some parts of the image where we will not expect to find colon cancer polyps. The performance of our approach will be measured in terms of both non-informative areas elimination and polyps’ areas preserving. The results obtained show the importance of having correct non- informative region estimation in order to fasten the whole recognition process.
	Address	Madrid (Spain)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	CASEIB
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ BSV2010			Serial	1469
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	Author	David Geronimo; Antonio Lopez
	Title	Sistema de deteccion de peatones			Type	Miscellaneous
	Year	2010	Publication	UAB Divulga	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Durante la próxima década, los sistemas de protección de peatones jugarán un papel fundamental en el reto de mejorar la seguridad viaria. El objetivo principal de estos sistemas, detectar peatones en entornos urbanos, implica procesar imágenes de escenas exteriores desde una plataforma móvil para buscar objetos de aspecto variable como son las personas. Dadas estas dificultades, estos sistemas hacen uso de las últimas técnicas de visión por computador. Esta propuesta consiste en un sistema de tres módulos basado tanto en información 2D como en 3D. El primer módulo utiliza información 3D para hacer una estimación de los parámetros de la carretera y seleccionar regiones de interés que serán analizadas después. El segundo módulo utiliza un clasificador de ventanas 2D para etiquetar las mencionadas regiones como peatón o no peatón. El módulo final vuelve a utilizar de nuevo la información 3D para verificar las regiones clasificadas y, con información 2D, refinar los resultados finales. Los resultados experimentales son positivos tanto en rendimiento como en tiempo de cómputo.
	Address	Bellaterra (Spain)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	spreading;ADAS			Approved	no
	Call Number	ADAS @ adas @ GeL2010b			Serial	1473
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	Author	Antonio Hernandez; Carlo Gatta; Petia Radeva; Laura Igual; R. Letaz; Sergio Escalera
	Title	Automatic Vessel Segmentation For Angiography and CT Registration			Type	Conference Article
	Year	2010	Publication	Medical Image Computing in Catalunya: Graduate Student Workshop	Abbreviated Journal
	Volume		Issue		Pages	1–2
	Keywords
	Abstract
	Address	Girona
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MICCAT
	Notes	MILAB;HUPBA			Approved	no
	Call Number	BCNPCL @ bcnpcl @ HGR2010			Serial	1474
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	Author	Michal Drozdzal; Laura Igual; Jordi Vitria; Petia Radeva; Carolina Malagelada; Fernando Azpiroz
	Title	SIFT flow-based Sequences Alignment			Type	Conference Article
	Year	2010	Publication	Medical Image Computing in Catalunya: Graduate Student Workshop	Abbreviated Journal
	Volume		Issue		Pages	7–8
	Keywords
	Abstract
	Address	Girona, Spain
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MICCAT
	Notes	OR;MILAB;MV			Approved	no
	Call Number	BCNPCL @ bcnpcl @ DIV2010			Serial	1475
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	Author	Miguel Reyes; Jordi Vitria; Petia Radeva; Sergio Escalera
	Title	Real-time Activity Monitoring of Inpatients			Type	Conference Article
	Year	2010	Publication	Medical Image Computing in Catalunya: Graduate Student Workshop	Abbreviated Journal
	Volume		Issue		Pages	35–36
	Keywords
	Abstract	In this paper, we present the development of an application capable of monitoring a set of patient vital signs in real time. The application has been designed to support the medical staff of a hospital. Preliminary results show the suitability of the system to prevent the injury produced by the agitation of the patients.
	Address	Girona
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MICCAT
	Notes	OR;MILAB;HUPBA;MV			Approved	no
	Call Number	BCNPCL @ bcnpcl @ RVR2010			Serial	1477
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	Author	Santiago Segui; Michal Drozdzal; Petia Radeva; Jordi Vitria
	Title	Severe Motility Diagnosis using WCE			Type	Conference Article
	Year	2010	Publication	Medical Image Computing in Catalunya: Graduate Student Workshop	Abbreviated Journal
	Volume		Issue		Pages	45–46
	Keywords
	Abstract
	Address	Girona, Spain
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MICCAT
	Notes	OR;MILAB;MV			Approved	no
	Call Number	BCNPCL @ bcnpcl @ SDR2010			Serial	1478
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	Author	Oriol Ramos Terrades; N. Serrano; Albert Gordo; Ernest Valveny; Alfons Juan-Ciscar
	Title	Interactive-predictive detection of handwritten text blocks			Type	Conference Article
	Year	2010	Publication	17th Document Recognition and Retrieval Conference, part of the IS&T-SPIE Electronic Imaging Symposium	Abbreviated Journal
	Volume	7534	Issue		Pages	75340Q–75340Q–10
	Keywords
	Abstract	A method for text block detection is introduced for old handwritten documents. The proposed method takes advantage of sequential book structure, taking into account layout information from pages previously transcribed. This glance at the past is used to predict the position of text blocks in the current page with the help of conventional layout analysis methods. The method is integrated into the GIDOC prototype: a first attempt to provide integrated support for interactive-predictive page layout analysis, text line detection and handwritten text transcription. Results are given in a transcription task on a 764-page Spanish manuscript from 1891.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	DRR
	Notes	DAG			Approved	no
	Call Number	DAG @ dag @ TSG2010			Serial	1479
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	Author	Albert Gordo; Florent Perronnin
	Title	A Bag-of-Pages Approach to Unordered Multi-Page Document Classification			Type	Conference Article
	Year	2010	Publication	20th International Conference on Pattern Recognition	Abbreviated Journal
	Volume		Issue		Pages	1920–1923
	Keywords
	Abstract	We consider the problem of classifying documents containing multiple unordered pages. For this purpose, we propose a novel bag-of-pages document representation. To represent a document, one assigns every page to a prototype in a codebook of pages. This leads to a histogram representation which can then be fed to any discriminative classifier. We also consider several refinements over this initial approach. We show on two challenging datasets that the proposed approach significantly outperforms a baseline system.
	Address	Istanbul (Turkey)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1051-4651	ISBN	978-1-4244-7542-1	Medium
	Area		Expedition		Conference	ICPR
	Notes	DAG			Approved	no
	Call Number	Admin @ si @ GoP2010			Serial	1480
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	Author	Jaume Garcia; Debora Gil; Luis Badiella; Aura Hernandez-Sabate; Francesc Carreras; Sandra Pujades; Enric Marti
	Title	A Normalized Framework for the Design of Feature Spaces Assessing the Left Ventricular Function			Type	Journal Article
	Year	2010	Publication	IEEE Transactions on Medical Imaging	Abbreviated Journal	TMI
	Volume	29	Issue	3	Pages	733-745
	Keywords
	Abstract	A through description of the left ventricle functionality requires combining complementary regional scores. A main limitation is the lack of multiparametric normality models oriented to the assessment of regional wall motion abnormalities (RWMA). This paper covers two main topics involved in RWMA assessment. We propose a general framework allowing the fusion and comparison across subjects of different regional scores. Our framework is used to explore which combination of regional scores (including 2-D motion and strains) is better suited for RWMA detection. Our statistical analysis indicates that for a proper (within interobserver variability) identification of RWMA, models should consider motion and extreme strains.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0278-0062	ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGH2010b			Serial	1507
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	Author	Jaume Garcia; Albert Andaluz; Debora Gil; Francesc Carreras
	Title	Decoupled External Forces in a Predictor-Corrector Segmentation Scheme for LV Contours in Tagged MR Images			Type	Conference Article
	Year	2010	Publication	32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society	Abbreviated Journal
	Volume		Issue		Pages	4805-4808
	Keywords
	Abstract	Computation of functional regional scores requires proper identification of LV contours. On one hand, manual segmentation is robust, but it is time consuming and requires high expertise. On the other hand, the tag pattern in TMR sequences is a problem for automatic segmentation of LV boundaries. We propose a segmentation method based on a predictorcorrector (Active Contours – Shape Models) scheme. Special stress is put in the definition of the AC external forces. First, we introduce a semantic description of the LV that discriminates myocardial tissue by using texture and motion descriptors. Second, in order to ensure convergence regardless of the initial contour, the external energy is decoupled according to the orientation of the edges in the image potential. We have validated the model in terms of error in segmented contours and accuracy of regional clinical scores.
	Address	Buenos Aires (Argentina)
	Corporate Author	IEEE EMB			Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1557-170X	ISBN	978-1-4244-4123-5	Medium
	Area		Expedition		Conference	EMBC
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GAG2010			Serial	1514
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	Author	Jaume Garcia; Debora Gil; Aura Hernandez-Sabate
	Title	Endowing Canonical Geometries to Cardiac Structures			Type	Book Chapter
	Year	2010	Publication	Statistical Atlases And Computational Models Of The Heart	Abbreviated Journal
	Volume	6364	Issue		Pages	124-133
	Keywords
	Abstract	International conference on Cardiac electrophysiological simulation challenge In this paper, we show that canonical (shape-based) geometries can be endowed to cardiac structures using tubular coordinates defined over their medial axis. We give an analytic formulation of these geometries by means of B-Splines. Since B-Splines present vector space structure PCA can be applied to their control points and statistical models relating boundaries and the interior of the anatomical structures can be derived. We demonstrate the applicability in two cardiac structures, the 3D Left Ventricular volume, and the 2D Left-Right ventricle set in 2D Short Axis view.
	Address
	Corporate Author				Thesis
	Publisher	Springer Berlin / Heidelberg	Place of Publication		Editor	Camara, O.; Pop, M.; Rhode, K.; Sermesant, M.; Smith, N.; Young, A.
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGH2010b			Serial	1515
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	Author	Debora Gil; Jaume Garcia; Aura Hernandez-Sabate; Enric Marti
	Title	Manifold parametrization of the left ventricle for a statistical modelling of its complete anatomy			Type	Conference Article
	Year	2010	Publication	8th Medical Imaging	Abbreviated Journal
	Volume	7623	Issue	762304	Pages	304
	Keywords
	Abstract	Distortion of Left Ventricle (LV) external anatomy is related to some dysfunctions, such as hypertrophy. The architecture of myocardial fibers determines LV electromechanical activation patterns as well as mechanics. Thus, their joined modelling would allow the design of specific interventions (such as peacemaker implantation and LV remodelling) and therapies (such as resynchronization). On one hand, accurate modelling of external anatomy requires either a dense sampling or a continuous infinite dimensional approach, which requires non-Euclidean statistics. On the other hand, computation of fiber models requires statistics on Riemannian spaces. Most approaches compute separate statistical models for external anatomy and fibers architecture. In this work we propose a general mathematical framework based on differential geometry concepts for computing a statistical model including, both, external and fiber anatomy. Our framework provides a continuous approach to external anatomy supporting standard statistics. We also provide a straightforward formula for the computation of the Riemannian fiber statistics. We have applied our methodology to the computation of complete anatomical atlas of canine hearts from diffusion tensor studies. The orientation of fibers over the average external geometry agrees with the segmental description of orientations reported in the literature.
	Address
	Corporate Author				Thesis
	Publisher	SPIE	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	SPIE
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGH2010a			Serial	1522
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	Author	Aura Hernandez-Sabate; Monica Mitiko; Sergio Shiguemi; Debora Gil
	Title	A validation protocol for assessing cardiac phase retrieval in IntraVascular UltraSound			Type	Conference Article
	Year	2010	Publication	Computing in Cardiology	Abbreviated Journal
	Volume	37	Issue		Pages	899-902
	Keywords
	Abstract	A good reliable approach to cardiac triggering is of utmost importance in obtaining accurate quantitative results of atherosclerotic plaque burden from the analysis of IntraVascular UltraSound. Although, in the last years, there has been an increase in research of methods for retrospective gating, there is no general consensus in a validation protocol. Many methods are based on quality assessment of longitudinal cuts appearance and those reporting quantitative numbers do not follow a standard protocol. Such heterogeneity in validation protocols makes faithful comparison across methods a difficult task. We propose a validation protocol based on the variability of the retrieved cardiac phase and explore the capability of several quality measures for quantifying such variability. An ideal detector, suitable for its application in clinical practice, should produce stable phases. That is, it should always sample the same cardiac cycle fraction. In this context, one should measure the variability (variance) of a candidate sampling with respect a ground truth (reference) sampling, since the variance would indicate how spread we are aiming a target. In order to quantify the deviation between the sampling and the ground truth, we have considered two quality scores reported in the literature: signed distance to the closest reference sample and distance to the right of each reference sample. We have also considered the residuals of the regression line of reference against candidate sampling. The performance of the measures has been explored on a set of synthetic samplings covering different cardiac cycle fractions and variabilities. From our simulations, we conclude that the metrics related to distances are sensitive to the shift considered while the residuals are robust against fraction and variabilities as far as one can establish a pair-wise correspondence between candidate and reference. We will further investigate the impact of false positive and negative detections in experimental data.
	Address
	Corporate Author				Thesis
	Publisher	IEEE	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0276-6547	ISBN	978-1-4244-7318-2	Medium
	Area		Expedition		Conference	CINC
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ HSM2010			Serial	1551
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	Author	Patricia Marquez
	Title	Conditions Ensuring Accuracy of Local Optical Flow Schemes			Type	Report
	Year	2010	Publication	CVC Tehcnical Report	Abbreviated Journal
	Volume	157	Issue		Pages
	Keywords
	Abstract	Accurate computation of optical flow is a key-point in many image processing fields. Detection of anomalous and unpredicted agents (such as pedestrians, bikers or cars) in urban scenes or pathology discrimination in medical imaging sequences, to mention just a two. The above kinds sequences present two main difficulties for standard optical flow techniques. On one hand, variability in acquisition conditions (illuminance, medical imaging modality, ...) force an alterantive representation for images fulfilling the britghtness constancy constrain. On the hand, current variational schemes produce oversmoothed fields unable to properly model discontinuous behaviours such as collisions or functionless pathological areas. This master project explores the abilities and limitations of local and global optical flow approaches. The master student will put especial emphasis in the theoretical grounds behind in order to design a variational framework combining the theoretical advantages of the considered techniques. In particular an optical flow based on Gabor phase tracking (developed in the group for medical imaging) will be generalized to urban scenes.
	Address
	Corporate Author				Thesis	Master's thesis
	Publisher		Place of Publication	Bellaterra 08193, Barcelona, Spain	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ Mar2010			Serial	1582
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	Author	Maurizio Mencuccini; Jordi Martinez-Vilalta; Josep Piñol; Lasse Loepfe; Mireia Burnat ; Xavier Alvarez; Juan Camacho; Debora Gil
	Title	A quantitative and statistically robust method for the determination of xylem conduit spatial distribution			Type	Journal Article
	Year	2010	Publication	American Journal of Botany	Abbreviated Journal	AJB
	Volume	97	Issue	8	Pages	1247-1259
	Keywords	Geyer; hydraulic conductivity; point pattern analysis; Ripley; Spatstat; vessel clusters; xylem anatomy; xylem network
	Abstract	Premise of the study: Because of their limited length, xylem conduits need to connect to each other to maintain water transport from roots to leaves. Conduit spatial distribution in a cross section plays an important role in aiding this connectivity. While indices of conduit spatial distribution already exist, they are not well defined statistically. * Methods: We used point pattern analysis to derive new spatial indices. One hundred and five cross-sectional images from different species were transformed into binary images. The resulting point patterns, based on the locations of the conduit centers-of-area, were analyzed to determine whether they departed from randomness. Conduit distribution was then modeled using a spatially explicit stochastic model. * Key results: The presence of conduit randomness, uniformity, or aggregation depended on the spatial scale of the analysis. The large majority of the images showed patterns significantly different from randomness at least at one spatial scale. A strong phylogenetic signal was detected in the spatial variables. * Conclusions: Conduit spatial arrangement has been largely conserved during evolution, especially at small spatial scales. Species in which conduits were aggregated in clusters had a lower conduit density compared to those with uniform distribution. Statistically sound spatial indices must be employed as an aid in the characterization of distributional patterns across species and in models of xylem water transport. Point pattern analysis is a very useful tool in identifying spatial patterns.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ MMG2010			Serial	1623
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