| |
Records |
Links |
|
Author |
Debora Gil; Jaume Garcia; Ruth Aris; Guillaume Houzeaux; Manuel Vazquez |
|
| |
Title |
A Riemmanian approach to cardiac fiber architecture modelling |
Type |
Conference Article |
| |
Year  |
2009 |
Publication |
1st International Conference on Mathematical & Computational Biomedical Engineering |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
59-62 |
|
| |
Keywords |
cardiac fiber architecture; diffusion tensor magnetic resonance imaging; differential (Rie- mannian) geometry. |
|
| |
Abstract |
There is general consensus that myocardial fiber architecture should be modelled in order to fully understand the electromechanical properties of the Left Ventricle (LV). Diffusion Tensor magnetic resonance Imaging (DTI) is the reference image modality for rapid measurement of fiber orientations by means of the tensor principal eigenvectors. In this work, we present a mathematical framework for across subject comparison of the local geometry of the LV anatomy including the fiber architecture from the statistical analysis of DTI studies. We use concepts of differential geometry for defining a parametric domain suitable for statistical analysis of a low number of samples. We use Riemannian metrics to define a consistent computation of DTI principal eigenvector modes of variation. Our framework has been applied to build an atlas of the LV fiber architecture from 7 DTI normal canine hearts. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
Swansea (UK) |
Editor |
Nithiarasu, R.L.R.V.L. |
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
CMBE |
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ FGA2009 |
Serial |
1520 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Debora Gil; Aura Hernandez-Sabate; Mireia Burnat; Steven Jansen; Jordi Martinez-Vilalta |
|
| |
Title |
Structure-Preserving Smoothing of Biomedical Images |
Type |
Conference Article |
| |
Year |
2009 |
Publication |
13th International Conference on Computer Analysis of Images and Patterns |
Abbreviated Journal |
|
|
| |
Volume |
5702 |
Issue |
|
Pages |
427-434 |
|
| |
Keywords |
non-linear smoothing; differential geometry; anatomical structures segmentation; cardiac magnetic resonance; computerized tomography. |
|
| |
Abstract |
Smoothing of biomedical images should preserve gray-level transitions between adjacent tissues, while restoring contours consistent with anatomical structures. Anisotropic diffusion operators are based on image appearance discontinuities (either local or contextual) and might fail at weak inter-tissue transitions. Meanwhile, the output of block-wise and morphological operations is prone to present a block structure due to the shape and size of the considered pixel neighborhood. In this contribution, we use differential geometry concepts to define a diffusion operator that restricts to image consistent level-sets. In this manner, the final state is a non-uniform intensity image presenting homogeneous inter-tissue transitions along anatomical structures, while smoothing intra-structure texture. Experiments on different types of medical images (magnetic resonance, computerized tomography) illustrate its benefit on a further process (such as segmentation) of images. |
|
| |
Address |
Münster, Germany |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer Berlin Heidelberg |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0302-9743 |
ISBN |
978-3-642-03766-5 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
CAIP |
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ GHB2009 |
Serial |
1527 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Aura Hernandez-Sabate; Debora Gil;Eduard Fernandez-Nofrerias;Petia Radeva; Enric Marti |
|
| |
Title |
Approaching Artery Rigid Dynamics in IVUS |
Type |
Journal Article |
| |
Year |
2009 |
Publication |
IEEE Transactions on Medical Imaging |
Abbreviated Journal |
TMI |
|
| |
Volume |
28 |
Issue |
11 |
Pages |
1670-1680 |
|
| |
Keywords |
Fourier analysis; intravascular ultrasound (IVUS) dynamics; longitudinal motion; quality measures; tissue deformation. |
|
| |
Abstract |
Tissue biomechanical properties (like strain and stress) are playing an increasing role in diagnosis and long-term treatment of intravascular coronary diseases. Their assessment strongly relies on estimation of vessel wall deformation. Since intravascular ultrasound (IVUS) sequences allow visualizing vessel morphology and reflect its dynamics, this technique represents a useful tool for evaluation of tissue mechanical properties. Image misalignment introduced by vessel-catheter motion is a major artifact for a proper tracking of tissue deformation. In this work, we focus on compensating and assessing IVUS rigid in-plane motion due to heart beating. Motion parameters are computed by considering both the vessel geometry and its appearance in the image. Continuum mechanics laws serve to introduce a novel score measuring motion reduction in in vivo sequences. Synthetic experiments validate the proposed score as measure of motion parameters accuracy; whereas results in in vivo pullbacks show the reliability of the presented methodologies in clinical cases. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0278-0062 |
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM; MILAB |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ HGF2009 |
Serial |
1545 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Enric Marti; Debora Gil; Marc Vivet; Carme Julia |
|
| |
Title |
Aprendizaje Basado en Proyectos en la asignatura de Gráficos por Computador en Ingeniería Informática. Balance de cuatro años de experiencia |
Type |
Miscellaneous |
| |
Year |
2009 |
Publication |
15th Jornadas de Enseñanza Universitaria de la Informatica |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
|
|
| |
Abstract |
|
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
Barcelona, Spain |
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
1 |
Series Issue |
|
Edition |
|
|
| |
ISSN |
978-84-692-2758-9 |
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
JENUI |
|
| |
Notes |
IAM;ADAS |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ MGV2009 |
Serial |
1596 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Enric Marti; Debora Gil; Marc Vivet; Carme Julia |
|
| |
Title |
Uso de recursos virtuales en Aprendizaje Basado en Proyectos. Una experiencia en la asignatura de Gráficos por Computador |
Type |
Miscellaneous |
| |
Year |
2009 |
Publication |
15th Jornadas de Enseñanza Universitaria de la Informatica |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
|
|
| |
Abstract |
|
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
Lleida |
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
Octava Jornada sobre Aprendizaje Cooperativo |
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
JENUI |
|
| |
Notes |
IAM;ADAS |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ MRG2009b |
Serial |
1597 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Enric Marti; Jaume Rocarias; Debora Gil; Aura Hernandez-Sabate; Jaume Garcia; Carme Julia; Marc Vivet |
|
| |
Title |
Uso de recursos virtuales en Aprendizaje Basado en Proyectos. Una experiencia en la asignatura de Gráficos por Computador |
Type |
Miscellaneous |
| |
Year |
2009 |
Publication |
I Congreso de Docencia Universitaria |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
Aprendizaje Basado en Proyectos; Project Based Learning; Aprendizaje Cooperativo; Recursos Virtuales para el Aprendizaje Cooperativo; Moodle |
|
| |
Abstract |
Presentamos una experiencia en Aprendizaje Basado en Proyectos (ABP) realizada los últimos cuatro años en Gráficos por Computador 2, asignatura de Ingeniería Informática, de la Escuela Técnica Superior de Ingeniería (ETSE) de la Universidad Autónoma de Barcelona (UAB). Utilizamos un entorno Moodle adaptado por nosotros llamado Caronte para poder gestionar la documentación generada en ABP. Primero se presenta la asignatura, basada en dos itinerarios para cursarla: ABP y TPPE (Teoría, Problemas, Prácticas, Examen). El alumno debe escoger uno de ellos. Ambos itinerarios generan una cantidad importante de documentación (entregas de trabajos y prácticas, correcciones, ejercicios, etc.) a gestionar. En la comunicación presentamos los espacios electrónicos Moodle de ambos itinerarios. Finalmente, mostramos los resultados de encuestas realizadas a los alumnos para finalmente exponer las conclusiones de la experiencia en ABP y el uso de Moodle, así como plantear mejoras y temas de discusión. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
Vigo (Spain) |
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM;ADAS; |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ MRG2009a |
Serial |
1602 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Misael Rosales; Petia Radeva;Oriol Rodriguez-Leon; Debora Gil |
|
| |
Title |
Modelling of image-catheter motion for 3-D IVUS |
Type |
Journal Article |
| |
Year |
2009 |
Publication |
Medical image analysis |
Abbreviated Journal |
MIA |
|
| |
Volume |
13 |
Issue |
1 |
Pages |
91-104 |
|
| |
Keywords |
Intravascular ultrasound (IVUS); Motion estimation; Motion decomposition; Fourier |
|
| |
Abstract |
Three-dimensional intravascular ultrasound (IVUS) allows to visualize and obtain volumetric measurements of coronary lesions through an exploration of the cross sections and longitudinal views of arteries. However, the visualization and subsequent morpho-geometric measurements in IVUS longitudinal cuts are subject to distortion caused by periodic image/vessel motion around the IVUS catheter. Usually, to overcome the image motion artifact ECG-gating and image-gated approaches are proposed, leading to slowing the pullback acquisition or disregarding part of IVUS data. In this paper, we argue that the image motion is due to 3-D vessel geometry as well as cardiac dynamics, and propose a dynamic model based on the tracking of an elliptical vessel approximation to recover the rigid transformation and align IVUS images without loosing any IVUS data. We report an extensive validation with synthetic simulated data and in vivo IVUS sequences of 30 patients achieving an average reduction of the image artifact of 97% in synthetic data and 79% in real-data. Our study shows that IVUS alignment improves longitudinal analysis of the IVUS data and is a necessary step towards accurate reconstruction and volumetric measurements of 3-D IVUS. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM;MILAB |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ RRR2009 |
Serial |
1646 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Albert Andaluz; Francesc Carreras; Debora Gil; Jaume Garcia |
|
| |
Title |
Una aplicació amigable pel càlcul de indicadors clínics del ventricle esquerre |
Type |
Miscellaneous |
| |
Year |
2010 |
Publication |
Forum Biocat 2010 |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
|
|
| |
Abstract |
|
|
| |
Address |
Lonja de Mar,Barcelona (Spain) |
|
| |
Corporate Author |
CVC |
Thesis |
|
|
| |
Publisher |
Biocat |
Place of Publication |
Barcelona |
Editor |
|
|
| |
Language |
Catalan |
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ ACG2010 |
Serial |
1483 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Jaume Garcia; Debora Gil; Luis Badiella; Aura Hernandez-Sabate; Francesc Carreras; Sandra Pujades; Enric Marti |
|
| |
Title |
A Normalized Framework for the Design of Feature Spaces Assessing the Left Ventricular Function |
Type |
Journal Article |
| |
Year |
2010 |
Publication |
IEEE Transactions on Medical Imaging |
Abbreviated Journal |
TMI |
|
| |
Volume |
29 |
Issue |
3 |
Pages |
733-745 |
|
| |
Keywords |
|
|
| |
Abstract |
A through description of the left ventricle functionality requires combining complementary regional scores. A main limitation is the lack of multiparametric normality models oriented to the assessment of regional wall motion abnormalities (RWMA). This paper covers two main topics involved in RWMA assessment. We propose a general framework allowing the fusion and comparison across subjects of different regional scores. Our framework is used to explore which combination of regional scores (including 2-D motion and strains) is better suited for RWMA detection. Our statistical analysis indicates that for a proper (within interobserver variability) identification of RWMA, models should consider motion and extreme strains. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0278-0062 |
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ GGH2010b |
Serial |
1507 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Jaume Garcia; Albert Andaluz; Debora Gil; Francesc Carreras |
|
| |
Title |
Decoupled External Forces in a Predictor-Corrector Segmentation Scheme for LV Contours in Tagged MR Images |
Type |
Conference Article |
| |
Year |
2010 |
Publication |
32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
4805-4808 |
|
| |
Keywords |
|
|
| |
Abstract |
Computation of functional regional scores requires proper identification of LV contours. On one hand, manual segmentation is robust, but it is time consuming and requires high expertise. On the other hand, the tag pattern in TMR sequences is a problem for automatic segmentation of LV boundaries. We propose a segmentation method based on a predictorcorrector (Active Contours – Shape Models) scheme. Special stress is put in the definition of the AC external forces. First, we introduce a semantic description of the LV that discriminates myocardial tissue by using texture and motion descriptors. Second, in order to ensure convergence regardless of the initial contour, the external energy is decoupled according to the orientation of the edges in the image potential. We have validated the model in terms of error in segmented contours and accuracy of regional clinical scores. |
|
| |
Address |
Buenos Aires (Argentina) |
|
| |
Corporate Author |
IEEE EMB |
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
1557-170X |
ISBN |
978-1-4244-4123-5 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
EMBC |
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ GAG2010 |
Serial |
1514 |
|
| Permanent link to this record |
