|
Records |
Links |
|
Author |
Sergio Vera; Debora Gil; Antonio Lopez; Miguel Angel Gonzalez Ballester |
|
|
Title |
Multilocal Creaseness Measure |
Type |
Journal |
|
Year |
2012 |
Publication |
The Insight Journal |
Abbreviated Journal |
IJ |
|
|
Volume |
|
Issue |
|
Pages |
|
|
|
Keywords |
Ridges, Valley, Creaseness, Structure Tensor, Skeleton, |
|
|
Abstract |
This document describes the implementation using the Insight Toolkit of an algorithm for detecting creases (ridges and valleys) in N-dimensional images, based on the Local Structure Tensor of the image. In addition to the filter used to calculate the creaseness image, a filter for the computation of the structure tensor is also included in this submission. |
|
|
Address |
|
|
|
Corporate Author |
Alma IT Systems |
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
english |
Summary Language |
english |
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
|
Expedition |
|
Conference |
|
|
|
Notes |
IAM;ADAS; |
Approved |
no |
|
|
Call Number |
IAM @ iam @ VGL2012 |
Serial |
1840 |
|
Permanent link to this record |
|
|
|
|
Author |
Sergio Vera; Miguel Angel Gonzalez Ballester; Debora Gil |
|
|
Title |
Volumetric Anatomical Parameterization and Meshing for Inter-patient Liver Coordinate System Deffinition |
Type |
Conference Article |
|
Year |
2013 |
Publication |
16th International Conference on Medical Image Computing and Computer Assisted Intervention |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
Nagoya; Japan; September 2013 |
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
|
Expedition |
|
Conference |
MICCAI |
|
|
Notes |
IAM |
Approved |
no |
|
|
Call Number |
Admin @ si @ VGG2013 |
Serial |
2301 |
|
Permanent link to this record |
|
|
|
|
Author |
Sergio Vera; Debora Gil; Miguel Angel Gonzalez Ballester |
|
|
Title |
Anatomical parameterization for volumetric meshing of the liver |
Type |
Conference Article |
|
Year |
2014 |
Publication |
SPIE – Medical Imaging |
Abbreviated Journal |
|
|
|
Volume |
9036 |
Issue |
|
Pages |
|
|
|
Keywords |
Coordinate System; Anatomy Modeling; Parameterization |
|
|
Abstract |
A coordinate system describing the interior of organs is a powerful tool for a systematic localization of injured tissue. If the same coordinate values are assigned to specific anatomical landmarks, the coordinate system allows integration of data across different medical image modalities. Harmonic mappings have been used to produce parametric coordinate systems over the surface of anatomical shapes, given their flexibility to set values
at specific locations through boundary conditions. However, most of the existing implementations in medical imaging restrict to either anatomical surfaces, or the depth coordinate with boundary conditions is given at sites
of limited geometric diversity. In this paper we present a method for anatomical volumetric parameterization that extends current harmonic parameterizations to the interior anatomy using information provided by the
volume medial surface. We have applied the methodology to define a common reference system for the liver shape and functional anatomy. This reference system sets a solid base for creating anatomical models of the patient’s liver, and allows comparing livers from several patients in a common framework of reference. |
|
|
Address |
Amsterdam; September 2014 |
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
|
Expedition |
|
Conference |
SPIE-MI |
|
|
Notes |
IAM; 600.075 |
Approved |
no |
|
|
Call Number |
Admin @ si @ VGG2014 |
Serial |
2456 |
|
Permanent link to this record |
|
|
|
|
Author |
Sergio Vera |
|
|
Title |
Anatomic Registration based on Medial Axis Parametrizations |
Type |
Book Whole |
|
Year |
2015 |
Publication |
PhD Thesis, Universitat Autonoma de Barcelona-CVC |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
Image registration has been for many years the gold standard method to bring two images into correspondence. It has been used extensively in the eld of medical imaging in order to put images of dierent patients into a common overlapping spatial position. However, medical image registration is a slow, iterative optimization process, where many variables and prone to fall into the pit traps local minima.
A coordinate system parameterizing the interior of organs is a powerful tool for a systematic localization of injured tissue. If the same coordinate values are assigned to specic anatomical sites, parameterizations ensure integration of data across different medical image modalities. Harmonic mappings have been used to produce parametric meshes over the surface of anatomical shapes, given their ability to set values at specic locations through boundary conditions. However, most of the existing implementations in medical imaging restrict to either anatomical surfaces, or the depth coordinate with boundary conditions is given at discrete sites of limited geometric diversity.
The medial surface of the shape can be used to provide a continuous basis for the denition of a depth coordinate. However, given that dierent methods for generation of medial surfaces generate dierent manifolds, not all of them are equally suited to be the basis of radial coordinate for a parameterization. It would be desirable that the medial surface will be smooth, and robust to surface shape noise, with low number of spurious branches or surfaces.
In this thesis we present methods for computation of smooth medial manifolds and apply them to the generation of for anatomical volumetric parameterization that extends current harmonic parameterizations to the interior anatomy using information provided by the volume medial surface. This reference system sets a solid base for creating anatomical models of the anatomical shapes, and allows comparing several patients in a common framework of reference. |
|
|
Address |
November 2015 |
|
|
Corporate Author |
|
Thesis |
Ph.D. thesis |
|
|
Publisher |
Ediciones Graficas Rey |
Place of Publication |
|
Editor |
Debora Gil;Miguel Angel Gonzalez Ballester |
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
978-84-943427-8-3 |
Medium |
|
|
|
Area |
|
Expedition |
|
Conference |
|
|
|
Notes |
IAM; 600.075 |
Approved |
no |
|
|
Call Number |
Admin @ si @ Ver2015 |
Serial |
2708 |
|
Permanent link to this record |
|
|
|
|
Author |
H. Martin ; Jens Fagertun; Sergio Vera; Debora Gil |
|
|
Title |
Medial structure generation for registration of anatomical structures |
Type |
Book Chapter |
|
Year |
2017 |
Publication |
Skeletonization, Theory, Methods and Applications |
Abbreviated Journal |
|
|
|
Volume |
11 |
Issue |
|
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
|
Expedition |
|
Conference |
|
|
|
Notes |
IAM; 600.096; 600.075; 600.145 |
Approved |
no |
|
|
Call Number |
Admin @ si @ MFV2017a |
Serial |
2935 |
|
Permanent link to this record |