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	Author	Mireia Sole; Joan Blanco; Debora Gil; Oliver Valero; Alvaro Pascual; B. Cardenas; G. Fonseka; E. Anton; Richard Frodsham; Francesca Vidal; Zaida Sarrate
	Title	Chromosomal positioning in spermatogenic cells is influenced by chromosomal factors associated with gene activity, bouquet formation, and meiotic sex-chromosome inactivation			Type	Journal Article
	Year	2021	Publication	Chromosoma	Abbreviated Journal
	Volume	130	Issue		Pages	163-175
	Keywords
	Abstract	Chromosome territoriality is not random along the cell cycle and it is mainly governed by intrinsic chromosome factors and gene expression patterns. Conversely, very few studies have explored the factors that determine chromosome territoriality and its influencing factors during meiosis. In this study, we analysed chromosome positioning in murine spermatogenic cells using three-dimensionally fluorescence in situ hybridization-based methodology, which allows the analysis of the entire karyotype. The main objective of the study was to decipher chromosome positioning in a radial axis (all analysed germ-cell nuclei) and longitudinal axis (only spermatozoa) and to identify the chromosomal factors that regulate such an arrangement. Results demonstrated that the radial positioning of chromosomes during spermatogenesis was cell-type specific and influenced by chromosomal factors associated to gene activity. Chromosomes with specific features that enhance transcription (high GC content, high gene density and high numbers of predicted expressed genes) were preferentially observed in the inner part of the nucleus in virtually all cell types. Moreover, the position of the sex chromosomes was influenced by their transcriptional status, from the periphery of the nucleus when its activity was repressed (pachytene) to a more internal position when it is partially activated (spermatid). At pachytene, chromosome positioning was also influenced by chromosome size due to the bouquet formation. Longitudinal chromosome positioning in the sperm nucleus was not random either, suggesting the importance of ordered longitudinal positioning for the release and activation of the paternal genome after fertilisation.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.145			Approved	no
	Call Number	Admin @ si @ SBG2021			Serial	3592
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	Author	Yasuko Sugito; Trevor Canham; Javier Vazquez; Marcelo Bertalmio
	Title	A Study of Objective Quality Metrics for HLG-Based HDR/WCG Image Coding			Type	Journal
	Year	2021	Publication	SMPTE Motion Imaging Journal	Abbreviated Journal	SMPTE
	Volume	130	Issue	4	Pages	53 - 65
	Keywords
	Abstract	In this work, we study the suitability of high dynamic range, wide color gamut (HDR/WCG) objective quality metrics to assess the perceived deterioration of compressed images encoded using the hybrid log-gamma (HLG) method, which is the standard for HDR television. Several image quality metrics have been developed to deal specifically with HDR content, although in previous work we showed that the best results (i.e., better matches to the opinion of human expert observers) are obtained by an HDR metric that consists simply in applying a given standard dynamic range metric, called visual information fidelity (VIF), directly to HLG-encoded images. However, all these HDR metrics ignore the chroma components for their calculations, that is, they consider only the luminance channel. For this reason, in the current work, we conduct subjective evaluation experiments in a professional setting using compressed HDR/WCG images encoded with HLG and analyze the ability of the best HDR metric to detect perceivable distortions in the chroma components, as well as the suitability of popular color metrics (including ΔITPR , which supports parameters for HLG) to correlate with the opinion scores. Our first contribution is to show that there is a need to consider the chroma components in HDR metrics, as there are color distortions that subjects perceive but that the best HDR metric fails to detect. Our second contribution is the surprising result that VIF, which utilizes only the luminance channel, correlates much better with the subjective evaluation scores than the metrics investigated that do consider the color components.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	CIC			Approved	no
	Call Number	SCV2021			Serial	3671
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	Author	Meysam Madadi; Hugo Bertiche; Sergio Escalera
	Title	Deep unsupervised 3D human body reconstruction from a sparse set of landmarks			Type	Journal Article
	Year	2021	Publication	International Journal of Computer Vision	Abbreviated Journal	IJCV
	Volume	129	Issue		Pages	2499–2512
	Keywords
	Abstract	In this paper we propose the first deep unsupervised approach in human body reconstruction to estimate body surface from a sparse set of landmarks, so called DeepMurf. We apply a denoising autoencoder to estimate missing landmarks. Then we apply an attention model to estimate body joints from landmarks. Finally, a cascading network is applied to regress parameters of a statistical generative model that reconstructs body. Our set of proposed loss functions allows us to train the network in an unsupervised way. Results on four public datasets show that our approach accurately reconstructs the human body from real world mocap data.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HUPBA; no proj			Approved	no
	Call Number	Admin @ si @ MBE2021			Serial	3654
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	Author	Pau Riba; Andreas Fischer; Josep Llados; Alicia Fornes
	Title	Learning graph edit distance by graph neural networks			Type	Journal Article
	Year	2021	Publication	Pattern Recognition	Abbreviated Journal	PR
	Volume	120	Issue		Pages	108132
	Keywords
	Abstract	The emergence of geometric deep learning as a novel framework to deal with graph-based representations has faded away traditional approaches in favor of completely new methodologies. In this paper, we propose a new framework able to combine the advances on deep metric learning with traditional approximations of the graph edit distance. Hence, we propose an efficient graph distance based on the novel field of geometric deep learning. Our method employs a message passing neural network to capture the graph structure, and thus, leveraging this information for its use on a distance computation. The performance of the proposed graph distance is validated on two different scenarios. On the one hand, in a graph retrieval of handwritten words i.e. keyword spotting, showing its superior performance when compared with (approximate) graph edit distance benchmarks. On the other hand, demonstrating competitive results for graph similarity learning when compared with the current state-of-the-art on a recent benchmark dataset.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.140; 600.121			Approved	no
	Call Number	Admin @ si @ RFL2021			Serial	3611
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	Author	Hannes Mueller; Andre Groeger; Jonathan Hersh; Andrea Matranga; Joan Serrat
	Title	Monitoring war destruction from space using machine learning			Type	Journal Article
	Year	2021	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	PNAS
	Volume	118	Issue	23	Pages	e2025400118
	Keywords
	Abstract	Existing data on building destruction in conflict zones rely on eyewitness reports or manual detection, which makes it generally scarce, incomplete, and potentially biased. This lack of reliable data imposes severe limitations for media reporting, humanitarian relief efforts, human-rights monitoring, reconstruction initiatives, and academic studies of violent conflict. This article introduces an automated method of measuring destruction in high-resolution satellite images using deep-learning techniques combined with label augmentation and spatial and temporal smoothing, which exploit the underlying spatial and temporal structure of destruction. As a proof of concept, we apply this method to the Syrian civil war and reconstruct the evolution of damage in major cities across the country. Our approach allows generating destruction data with unprecedented scope, resolution, and frequency—and makes use of the ever-higher frequency at which satellite imagery becomes available.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS; 600.118			Approved	no
	Call Number	Admin @ si @ MGH2021			Serial	3584
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	Author	Lei Kang; Pau Riba; Mauricio Villegas; Alicia Fornes; Marçal Rusiñol
	Title	Candidate Fusion: Integrating Language Modelling into a Sequence-to-Sequence Handwritten Word Recognition Architecture			Type	Journal Article
	Year	2021	Publication	Pattern Recognition	Abbreviated Journal	PR
	Volume	112	Issue		Pages	107790
	Keywords
	Abstract	Sequence-to-sequence models have recently become very popular for tackling handwritten word recognition problems. However, how to effectively integrate an external language model into such recognizer is still a challenging problem. The main challenge faced when training a language model is to deal with the language model corpus which is usually different to the one used for training the handwritten word recognition system. Thus, the bias between both word corpora leads to incorrectness on the transcriptions, providing similar or even worse performances on the recognition task. In this work, we introduce Candidate Fusion, a novel way to integrate an external language model to a sequence-to-sequence architecture. Moreover, it provides suggestions from an external language knowledge, as a new input to the sequence-to-sequence recognizer. Hence, Candidate Fusion provides two improvements. On the one hand, the sequence-to-sequence recognizer has the flexibility not only to combine the information from itself and the language model, but also to choose the importance of the information provided by the language model. On the other hand, the external language model has the ability to adapt itself to the training corpus and even learn the most commonly errors produced from the recognizer. Finally, by conducting comprehensive experiments, the Candidate Fusion proves to outperform the state-of-the-art language models for handwritten word recognition tasks.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.140; 601.302; 601.312; 600.121			Approved	no
	Call Number	Admin @ si @ KRV2021			Serial	3343
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	Author	Jorge Charco; Angel Sappa; Boris X. Vintimilla; Henry Velesaca
	Title	Camera pose estimation in multi-view environments: From virtual scenarios to the real world			Type	Journal Article
	Year	2021	Publication	Image and Vision Computing	Abbreviated Journal	IVC
	Volume	110	Issue		Pages	104182
	Keywords
	Abstract	This paper presents a domain adaptation strategy to efficiently train network architectures for estimating the relative camera pose in multi-view scenarios. The network architectures are fed by a pair of simultaneously acquired images, hence in order to improve the accuracy of the solutions, and due to the lack of large datasets with pairs of overlapped images, a domain adaptation strategy is proposed. The domain adaptation strategy consists on transferring the knowledge learned from synthetic images to real-world scenarios. For this, the networks are firstly trained using pairs of synthetic images, which are captured at the same time by a pair of cameras in a virtual environment; and then, the learned weights of the networks are transferred to the real-world case, where the networks are retrained with a few real images. Different virtual 3D scenarios are generated to evaluate the relationship between the accuracy on the result and the similarity between virtual and real scenarios—similarity on both geometry of the objects contained in the scene as well as relative pose between camera and objects in the scene. Experimental results and comparisons are provided showing that the accuracy of all the evaluated networks for estimating the camera pose improves when the proposed domain adaptation strategy is used, highlighting the importance on the similarity between virtual-real scenarios.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MSIAU; 600.130; 600.122			Approved	no
	Call Number	Admin @ si @ CSV2021			Serial	3577
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	Author	Andres Mafla; Ruben Tito; Sounak Dey; Lluis Gomez; Marçal Rusiñol; Ernest Valveny; Dimosthenis Karatzas
	Title	Real-time Lexicon-free Scene Text Retrieval			Type	Journal Article
	Year	2021	Publication	Pattern Recognition	Abbreviated Journal	PR
	Volume	110	Issue		Pages	107656
	Keywords
	Abstract	In this work, we address the task of scene text retrieval: given a text query, the system returns all images containing the queried text. The proposed model uses a single shot CNN architecture that predicts bounding boxes and builds a compact representation of spotted words. In this way, this problem can be modeled as a nearest neighbor search of the textual representation of a query over the outputs of the CNN collected from the totality of an image database. Our experiments demonstrate that the proposed model outperforms previous state-of-the-art, while offering a significant increase in processing speed and unmatched expressiveness with samples never seen at training time. Several experiments to assess the generalization capability of the model are conducted in a multilingual dataset, as well as an application of real-time text spotting in videos.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.121; 600.129; 601.338			Approved	no
	Call Number	Admin @ si @ MTD2021			Serial	3493
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	Author	Manisha Das; Deep Gupta; Petia Radeva; Ashwini M. Bakde
	Title	Optimized CT-MR neurological image fusion framework using biologically inspired spiking neural model in hybrid ℓ1 - ℓ0 layer decomposition domain			Type	Journal Article
	Year	2021	Publication	Biomedical Signal Processing and Control	Abbreviated Journal	BSPC
	Volume	68	Issue		Pages	102535
	Keywords
	Abstract	Medical image fusion plays an important role in the clinical diagnosis of several critical neurological diseases by merging complementary information available in multimodal images. In this paper, a novel CT-MR neurological image fusion framework is proposed using an optimized biologically inspired feedforward neural model in two-scale hybrid ℓ1 − ℓ0 decomposition domain using gray wolf optimization to preserve the structural as well as texture information present in source CT and MR images. Initially, the source images are subjected to two-scale ℓ1 − ℓ0 decomposition with optimized parameters, giving a scale-1 detail layer, a scale-2 detail layer and a scale-2 base layer. Two detail layers at scale-1 and 2 are fused using an optimized biologically inspired neural model and weighted average scheme based on local energy and modified spatial frequency to maximize the preservation of edges and local textures, respectively, while the scale-2 base layer gets fused using choose max rule to preserve the background information. To optimize the hyper-parameters of hybrid ℓ1 − ℓ0 decomposition and biologically inspired neural model, a fitness function is evaluated based on spatial frequency and edge index of the resultant fused image obtained by adding all the fused components. The fusion performance is analyzed by conducting extensive experiments on different CT-MR neurological images. Experimental results indicate that the proposed method provides better-fused images and outperforms the other state-of-the-art fusion methods in both visual and quantitative assessments.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB; no proj			Approved	no
	Call Number	Admin @ si @ DGR2021b			Serial	3636
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	Author	AN Ruchai; VI Kober; KA Dorofeev; VN Karnaukhov; Mikhail Mozerov
	Title	Classification of breast abnormalities using a deep convolutional neural network and transfer learning			Type	Journal Article
	Year	2021	Publication	Journal of Communications Technology and Electronics	Abbreviated Journal
	Volume	66	Issue	6	Pages	778–783
	Keywords
	Abstract	A new algorithm for classification of breast pathologies in digital mammography using a convolutional neural network and transfer learning is proposed. The following pretrained neural networks were chosen: MobileNetV2, InceptionResNetV2, Xception, and ResNetV2. All mammographic images were pre-processed to improve classification reliability. Transfer training was carried out using additional data augmentation and fine-tuning. The performance of the proposed algorithm for classification of breast pathologies in terms of accuracy on real data is discussed and compared with that of state-of-the-art algorithms on the available MIAS database.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	LAMP;			Approved	no
	Call Number	Admin @ si @ RKD2022			Serial	3680
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	Author	O.F.Ahmad; Y.Mori; M.Misawa; S.Kudo; J.T.Anderson; Jorge Bernal
	Title	Establishing key research questions for the implementation of artificial intelligence in colonoscopy: a modified Delphi method			Type	Journal Article
	Year	2021	Publication	Endoscopy	Abbreviated Journal	END
	Volume	53	Issue	9	Pages	893-901
	Keywords
	Abstract	BACKGROUND : Artificial intelligence (AI) research in colonoscopy is progressing rapidly but widespread clinical implementation is not yet a reality. We aimed to identify the top implementation research priorities. METHODS : An established modified Delphi approach for research priority setting was used. Fifteen international experts, including endoscopists and translational computer scientists/engineers, from nine countries participated in an online survey over 9 months. Questions related to AI implementation in colonoscopy were generated as a long-list in the first round, and then scored in two subsequent rounds to identify the top 10 research questions. RESULTS : The top 10 ranked questions were categorized into five themes. Theme 1: clinical trial design/end points (4 questions), related to optimum trial designs for polyp detection and characterization, determining the optimal end points for evaluation of AI, and demonstrating impact on interval cancer rates. Theme 2: technological developments (3 questions), including improving detection of more challenging and advanced lesions, reduction of false-positive rates, and minimizing latency. Theme 3: clinical adoption/integration (1 question), concerning the effective combination of detection and characterization into one workflow. Theme 4: data access/annotation (1 question), concerning more efficient or automated data annotation methods to reduce the burden on human experts. Theme 5: regulatory approval (1 question), related to making regulatory approval processes more efficient. CONCLUSIONS : This is the first reported international research priority setting exercise for AI in colonoscopy. The study findings should be used as a framework to guide future research with key stakeholders to accelerate the clinical implementation of AI in endoscopy.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ISE			Approved	no
	Call Number	Admin @ si @ AMM2021			Serial	3670
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	Author	Zhengying Liu; Adrien Pavao; Zhen Xu; Sergio Escalera; Fabio Ferreira; Isabelle Guyon; Sirui Hong; Frank Hutter; Rongrong Ji; Julio C. S. Jacques Junior; Ge Li; Marius Lindauer; Zhipeng Luo; Meysam Madadi; Thomas Nierhoff; Kangning Niu; Chunguang Pan; Danny Stoll; Sebastien Treguer; Jin Wang; Peng Wang; Chenglin Wu; Youcheng Xiong; Arber Zela; Yang Zhang
	Title	Winning Solutions and Post-Challenge Analyses of the ChaLearn AutoDL Challenge 2019			Type	Journal Article
	Year	2021	Publication	IEEE Transactions on Pattern Analysis and Machine Intelligence	Abbreviated Journal	TPAMI
	Volume	43	Issue	9	Pages	3108 - 3125
	Keywords
	Abstract	This paper reports the results and post-challenge analyses of ChaLearn's AutoDL challenge series, which helped sorting out a profusion of AutoML solutions for Deep Learning (DL) that had been introduced in a variety of settings, but lacked fair comparisons. All input data modalities (time series, images, videos, text, tabular) were formatted as tensors and all tasks were multi-label classification problems. Code submissions were executed on hidden tasks, with limited time and computational resources, pushing solutions that get results quickly. In this setting, DL methods dominated, though popular Neural Architecture Search (NAS) was impractical. Solutions relied on fine-tuned pre-trained networks, with architectures matching data modality. Post-challenge tests did not reveal improvements beyond the imposed time limit. While no component is particularly original or novel, a high level modular organization emerged featuring a “meta-learner”, “data ingestor”, “model selector”, “model/learner”, and “evaluator”. This modularity enabled ablation studies, which revealed the importance of (off-platform) meta-learning, ensembling, and efficient data management. Experiments on heterogeneous module combinations further confirm the (local) optimality of the winning solutions. Our challenge legacy includes an ever-lasting benchmark (http://autodl.chalearn.org), the open-sourced code of the winners, and a free “AutoDL self-service.”
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HUPBA; no proj			Approved	no
	Call Number	Admin @ si @ LPX2021			Serial	3587
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	Author	Hugo Bertiche; Meysam Madadi; Sergio Escalera
	Title	PBNS: Physically Based Neural Simulation for Unsupervised Garment Pose Space Deformation			Type	Journal Article
	Year	2021	Publication	ACM Transactions on Graphics	Abbreviated Journal
	Volume	40	Issue	6	Pages	1-14
	Keywords
	Abstract	We present a methodology to automatically obtain Pose Space Deformation (PSD) basis for rigged garments through deep learning. Classical approaches rely on Physically Based Simulations (PBS) to animate clothes. These are general solutions that, given a sufficiently fine-grained discretization of space and time, can achieve highly realistic results. However, they are computationally expensive and any scene modification prompts the need of re-simulation. Linear Blend Skinning (LBS) with PSD offers a lightweight alternative to PBS, though, it needs huge volumes of data to learn proper PSD. We propose using deep learning, formulated as an implicit PBS, to unsupervisedly learn realistic cloth Pose Space Deformations in a constrained scenario: dressed humans. Furthermore, we show it is possible to train these models in an amount of time comparable to a PBS of a few sequences. To the best of our knowledge, we are the first to propose a neural simulator for cloth. While deep-based approaches in the domain are becoming a trend, these are data-hungry models. Moreover, authors often propose complex formulations to better learn wrinkles from PBS data. Supervised learning leads to physically inconsistent predictions that require collision solving to be used. Also, dependency on PBS data limits the scalability of these solutions, while their formulation hinders its applicability and compatibility. By proposing an unsupervised methodology to learn PSD for LBS models (3D animation standard), we overcome both of these drawbacks. Results obtained show cloth-consistency in the animated garments and meaningful pose-dependant folds and wrinkles. Our solution is extremely efficient, handles multiple layers of cloth, allows unsupervised outfit resizing and can be easily applied to any custom 3D avatar.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HUPBA; no proj			Approved	no
	Call Number	Admin @ si @ BME2021c			Serial	3643
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	Author	Victor M. Campello; Polyxeni Gkontra; Cristian Izquierdo; Carlos Martin-Isla; Alireza Sojoudi; Peter M. Full; Klaus Maier-Hein; Yao Zhang; Zhiqiang He; Jun Ma; Mario Parreno; Alberto Albiol; Fanwei Kong; Shawn C. Shadden; Jorge Corral Acero; Vaanathi Sundaresan; Mina Saber; Mustafa Elattar; Hongwei Li; Bjoern Menze; Firas Khader; Christoph Haarburger; Cian M. Scannell; Mitko Veta; Adam Carscadden; Kumaradevan Punithakumar; Xiao Liu; Sotirios A. Tsaftaris; Xiaoqiong Huang; Xin Yang; Lei Li; Xiahai Zhuang; David Vilades; Martin L. Descalzo; Andrea Guala; Lucia La Mura; Matthias G. Friedrich; Ria Garg; Julie Lebel; Filipe Henriques; Mahir Karakas; Ersin Cavus; Steffen E. Petersen; Sergio Escalera; Santiago Segui; Jose F. Rodriguez Palomares; Karim Lekadir
	Title	Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Segmentation: The M&Ms Challenge			Type	Journal Article
	Year	2021	Publication	IEEE Transactions on Medical Imaging	Abbreviated Journal	TMI
	Volume	40	Issue	12	Pages	3543-3554
	Keywords
	Abstract	The emergence of deep learning has considerably advanced the state-of-the-art in cardiac magnetic resonance (CMR) segmentation. Many techniques have been proposed over the last few years, bringing the accuracy of automated segmentation close to human performance. However, these models have been all too often trained and validated using cardiac imaging samples from single clinical centres or homogeneous imaging protocols. This has prevented the development and validation of models that are generalizable across different clinical centres, imaging conditions or scanner vendors. To promote further research and scientific benchmarking in the field of generalizable deep learning for cardiac segmentation, this paper presents the results of the Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Segmentation (M&Ms) Challenge, which was recently organized as part of the MICCAI 2020 Conference. A total of 14 teams submitted different solutions to the problem, combining various baseline models, data augmentation strategies, and domain adaptation techniques. The obtained results indicate the importance of intensity-driven data augmentation, as well as the need for further research to improve generalizability towards unseen scanner vendors or new imaging protocols. Furthermore, we present a new resource of 375 heterogeneous CMR datasets acquired by using four different scanner vendors in six hospitals and three different countries (Spain, Canada and Germany), which we provide as open-access for the community to enable future research in the field.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HUPBA; no proj			Approved	no
	Call Number	Admin @ si @ CGI2021			Serial	3653
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	Author	Daniel Hernandez; Antonio Espinosa; David Vazquez; Antonio Lopez; Juan C. Moure
	Title	3D Perception With Slanted Stixels on GPU			Type	Journal Article
	Year	2021	Publication	IEEE Transactions on Parallel and Distributed Systems	Abbreviated Journal	TPDS
	Volume	32	Issue	10	Pages	2434-2447
	Keywords	Daniel Hernandez-Juarez; Antonio Espinosa; David Vazquez; Antonio M. Lopez; Juan C. Moure
	Abstract	This article presents a GPU-accelerated software design of the recently proposed model of Slanted Stixels, which represents the geometric and semantic information of a scene in a compact and accurate way. We reformulate the measurement depth model to reduce the computational complexity of the algorithm, relying on the confidence of the depth estimation and the identification of invalid values to handle outliers. The proposed massively parallel scheme and data layout for the irregular computation pattern that corresponds to a Dynamic Programming paradigm is described and carefully analyzed in performance terms. Performance is shown to scale gracefully on current generation embedded GPUs. We assess the proposed methods in terms of semantic and geometric accuracy as well as run-time performance on three publicly available benchmark datasets. Our approach achieves real-time performance with high accuracy for 2048 × 1024 image sizes and 4 × 4 Stixel resolution on the low-power embedded GPU of an NVIDIA Tegra Xavier.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS; 600.124; 600.118			Approved	no
	Call Number	Admin @ si @ HEV2021			Serial	3561
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