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	Author	David Vazquez; Jorge Bernal; F. Javier Sanchez; Gloria Fernandez Esparrach; Antonio Lopez; Adriana Romero; Michal Drozdzal; Aaron Courville
	Title	A Benchmark for Endoluminal Scene Segmentation of Colonoscopy Images			Type	Journal Article
	Year	2017	Publication	Journal of Healthcare Engineering	Abbreviated Journal	JHCE
	Volume		Issue		Pages	2040-2295
	Keywords	Colonoscopy images; Deep Learning; Semantic Segmentation
	Abstract	Colorectal cancer (CRC) is the third cause of cancer death world-wide. Currently, the standard approach to reduce CRC-related mortality is to perform regular screening in search for polyps and colonoscopy is the screening tool of choice. The main limitations of this screening procedure are polyp miss- rate and inability to perform visual assessment of polyp malignancy. These drawbacks can be reduced by designing Decision Support Systems (DSS) aim- ing to help clinicians in the different stages of the procedure by providing endoluminal scene segmentation. Thus, in this paper, we introduce an extended benchmark of colonoscopy image segmentation, with the hope of establishing a new strong benchmark for colonoscopy image analysis research. The proposed dataset consists of 4 relevant classes to inspect the endolumninal scene, tar- geting different clinical needs. Together with the dataset and taking advantage of advances in semantic segmentation literature, we provide new baselines by training standard fully convolutional networks (FCN). We perform a compar- ative study to show that FCN significantly outperform, without any further post-processing, prior results in endoluminal scene segmentation, especially with respect to polyp segmentation and localization.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS; MV; 600.075; 600.085; 600.076; 601.281; 600.118			Approved	no
	Call Number	VBS2017b			Serial	2940
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	Author	Carles Sanchez; Debora Gil; T. Gache; N. Koufos; Marta Diez-Ferrer; Antoni Rosell
	Title	SENSA: a System for Endoscopic Stenosis Assessment			Type	Conference Article
	Year	2016	Publication	28th Conference of the international Society for Medical Innovation and Technology	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Documenting the severity of a static or dynamic Central Airway Obstruction (CAO) is crucial to establish proper diagnosis and treatment, predict possible treatment effects and better follow-up the patients. The subjective visual evaluation of a stenosis during video-bronchoscopy still remains the most common way to assess a CAO in spite of a consensus among experts for a need to standardize all calculations [1]. The Computer Vision Center in cooperation with the «Hospital de Bellvitge», has developed a System for Endoscopic Stenosis Assessment (SENSA), which computes CAO directly by analyzing standard bronchoscopic data without the need of using other imaging tecnologies.
	Address	Rotterdam; The Netherlands; October 2016
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	SMIT
	Notes	IAM;			Approved	no
	Call Number	Admin @ si @ SGG2016			Serial	2942
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	Author	Carles Sanchez; Antonio Esteban Lansaque; Agnes Borras; Marta Diez-Ferrer; Antoni Rosell; Debora Gil
	Title	Towards a Videobronchoscopy Localization System from Airway Centre Tracking			Type	Conference Article
	Year	2017	Publication	12th International Conference on Computer Vision Theory and Applications	Abbreviated Journal
	Volume		Issue		Pages	352-359
	Keywords	Video-bronchoscopy; Lung cancer diagnosis; Airway lumen detection; Region tracking; Guided bronchoscopy navigation
	Abstract	Bronchoscopists use fluoroscopy to guide flexible bronchoscopy to the lesion to be biopsied without any kind of incision. Being fluoroscopy an imaging technique based on X-rays, the risk of developmental problems and cancer is increased in those subjects exposed to its application, so minimizing radiation is crucial. Alternative guiding systems such as electromagnetic navigation require specific equipment, increase the cost of the clinical procedure and still require fluoroscopy. In this paper we propose an image based guiding system based on the extraction of airway centres from intra-operative videos. Such anatomical landmarks are matched to the airway centreline extracted from a pre-planned CT to indicate the best path to the nodule. We present a feasibility study of our navigation system using simulated bronchoscopic videos and a multi-expert validation of landmarks extraction in 3 intra-operative ultrathin explorations.
	Address	Porto; Portugal; February 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	VISAPP
	Notes	IAM; 600.096; 600.075; 600.145			Approved	no
	Call Number	Admin @ si @ SEB2017			Serial	2943
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	Author	Marta Diez-Ferrer; Debora Gil; Elena Carreño; Susana Padrones; Samantha Aso; Vanesa Vicens; Noelia Cubero de Frutos; Rosa Lopez Lisbona; Carles Sanchez; Agnes Borras; Antoni Rosell
	Title	Positive Airway Pressure-Enhanced CT to Improve Virtual Bronchoscopic Navigation			Type	Journal Article
	Year	2017	Publication	European Respiratory Journal	Abbreviated Journal	ERJ
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	Admin @ si @ DGC2017b			Serial	3632
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	Author	Quentin Angermann; Jorge Bernal; Cristina Sanchez Montes; Maroua Hammami; Gloria Fernandez Esparrach; Xavier Dray; Olivier Romain; F. Javier Sanchez; Aymeric Histace
	Title	Real-Time Polyp Detection in Colonoscopy Videos: A Preliminary Study For Adapting Still Frame-based Methodology To Video Sequences Analysis			Type	Conference Article
	Year	2017	Publication	31st International Congress and Exhibition on Computer Assisted Radiology and Surgery	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Barcelona; Spain; June 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CARS
	Notes	MV; no menciona			Approved	no
	Call Number	Admin @ si @ ABS2017			Serial	2947
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	Author	Hana Jarraya; Oriol Ramos Terrades; Josep Llados
	Title	Graph Embedding through Probabilistic Graphical Model applied to Symbolic Graphs			Type	Conference Article
	Year	2017	Publication	8th Iberian Conference on Pattern Recognition and Image Analysis	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Attributed Graph; Probabilistic Graphical Model; Graph Embedding; Structured Support Vector Machines
	Abstract	We propose a new Graph Embedding (GEM) method that takes advantages of structural pattern representation. It models an Attributed Graph (AG) as a Probabilistic Graphical Model (PGM). Then, it learns the parameters of this PGM presented by a vector. This vector is a signature of AG in a lower dimensional vectorial space. We apply Structured Support Vector Machines (SSVM) to process classification task. As first tentative, results on the GREC dataset are encouraging enough to go further on this direction.
	Address	Faro; Portugal; June 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IbPRIA
	Notes	DAG; 600.097; 600.121			Approved	no
	Call Number	Admin @ si @ JRL2017a			Serial	2953
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	Author	Lasse Martensson; Anders Hast; Alicia Fornes
	Title	Word Spotting as a Tool for Scribal Attribution			Type	Conference Article
	Year	2017	Publication	2nd Conference of the association of Digital Humanities in the Nordic Countries	Abbreviated Journal
	Volume		Issue		Pages	87-89
	Keywords
	Abstract
	Address	Gothenburg; Suecia; March 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-91-88348-83-8	Medium
	Area		Expedition		Conference	DHN
	Notes	DAG; 600.097; 600.121			Approved	no
	Call Number	Admin @ si @ MHF2017			Serial	2954
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	Author	Mireia Sole; Joan Blanco; Debora Gil; G. Fonseka; Richard Frodsham; Oliver Valero; Francesca Vidal; Zaida Sarrate
	Title	Is there a pattern of Chromosome territoriality along mice spermatogenesis?			Type	Conference Article
	Year	2017	Publication	3rd Spanish MeioNet Meeting Abstract Book	Abbreviated Journal
	Volume		Issue		Pages	55-56
	Keywords
	Abstract
	Address	Miraflores de la Sierra; Madrid; June 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MEIONET
	Notes	IAM; 600.096; 600.145			Approved	no
	Call Number	Admin @ si @			Serial	2958
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	Author	Mireia Sole; Joan Blanco; Debora Gil; G. Fonseka; Richard Frodsham; Oliver Valero; Francesca Vidal; Zaida Sarrate
	Title	Unraveling the enigmas of chromosome territoriality during spermatogenesis			Type	Conference Article
	Year	2017	Publication	IX Jornada del Departament de Biologia Cel•lular, Fisiologia i Immunologia	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	UAB; Barcelona; June 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.145			Approved	no
	Call Number	Admin @ si @ SBG2017b			Serial	2959
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	Author	Xinhang Song; Shuqiang Jiang; Luis Herranz
	Title	Combining Models from Multiple Sources for RGB-D Scene Recognition			Type	Conference Article
	Year	2017	Publication	26th International Joint Conference on Artificial Intelligence	Abbreviated Journal
	Volume		Issue		Pages	4523-4529
	Keywords	Robotics and Vision; Vision and Perception
	Abstract	Depth can complement RGB with useful cues about object volumes and scene layout. However, RGB-D image datasets are still too small for directly training deep convolutional neural networks (CNNs), in contrast to the massive monomodal RGB datasets. Previous works in RGB-D recognition typically combine two separate networks for RGB and depth data, pretrained with a large RGB dataset and then fine tuned to the respective target RGB and depth datasets. These approaches have several limitations: 1) only use low-level filters learned from RGB data, thus not being able to exploit properly depth-specific patterns, and 2) RGB and depth features are only combined at high-levels but rarely at lower-levels. In this paper, we propose a framework that leverages both knowledge acquired from large RGB datasets together with depth-specific cues learned from the limited depth data, obtaining more effective multi-source and multi-modal representations. We propose a multi-modal combination method that selects discriminative combinations of layers from the different source models and target modalities, capturing both high-level properties of the task and intrinsic low-level properties of both modalities.
	Address	Melbourne; Australia; August 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IJCAI
	Notes	LAMP; 600.120			Approved	no
	Call Number	Admin @ si @ SJH2017b			Serial	2966
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	Author	Xinhang Song; Luis Herranz; Shuqiang Jiang
	Title	Depth CNNs for RGB-D Scene Recognition: Learning from Scratch Better than Transferring from RGB-CNNs			Type	Conference Article
	Year	2017	Publication	31st AAAI Conference on Artificial Intelligence	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	RGB-D scene recognition; weakly supervised; fine tune; CNN
	Abstract	Scene recognition with RGB images has been extensively studied and has reached very remarkable recognition levels, thanks to convolutional neural networks (CNN) and large scene datasets. In contrast, current RGB-D scene data is much more limited, so often leverages RGB large datasets, by transferring pretrained RGB CNN models and fine-tuning with the target RGB-D dataset. However, we show that this approach has the limitation of hardly reaching bottom layers, which is key to learn modality-specific features. In contrast, we focus on the bottom layers, and propose an alternative strategy to learn depth features combining local weakly supervised training from patches followed by global fine tuning with images. This strategy is capable of learning very discriminative depth-specific features with limited depth images, without resorting to Places-CNN. In addition we propose a modified CNN architecture to further match the complexity of the model and the amount of data available. For RGB-D scene recognition, depth and RGB features are combined by projecting them in a common space and further leaning a multilayer classifier, which is jointly optimized in an end-to-end network. Our framework achieves state-of-the-art accuracy on NYU2 and SUN RGB-D in both depth only and combined RGB-D data.
	Address	San Francisco CA; February 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	AAAI
	Notes	LAMP; 600.120			Approved	no
	Call Number	Admin @ si @ SHJ2017			Serial	2967
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	Author	Simone Balocco; Francesco Ciompi; Juan Rigla; Xavier Carrillo; J. Mauri; Petia Radeva
	Title	Intra-Coronary Stent localization In Intravascular Ultrasound Sequences, A Preliminary Study			Type	Conference Article
	Year	2017	Publication	International workshop on Computing and Visualization for Intravascular Imaging and Computer Assisted Stenting (CVII-STENT)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	An intraluminal coronary stent is a metal scaold deployed in a stenotic artery during Percutaneous Coronary Intervention (PCI). Intravascular Ultrasound (IVUS) is a catheter-based imaging technique generally used for assessing the correct placement of the stent. All the approaches proposed so far for the stent analysis only focused on the struts detection, while this paper proposes a novel approach to detect the boundaries and the position of the stent along the pullback. The pipeline of the method requires the identication of the stable frames of the sequence and the reliable detection of stent struts. Using this data, a measure of likelihood for a frame to contain a stent is computed. Then, a robust binary representation of the presence of the stent in the pullback is obtained applying an iterative and multi-scale approximation of the signal to symbols using the SAX algorithm. Results obtained comparing the automatic results versus the manual annotation of two observers on 80 IVUS in-vivo sequences shows that the method approaches the inter-observer variability scores.
	Address	Quebec; Canada; September 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MICCAIW
	Notes	MILAB; no proj			Approved	no
	Call Number	Admin @ si @ BCR2017			Serial	2968
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	Author	Aitor Alvarez-Gila; Joost Van de Weijer; Estibaliz Garrote
	Title	Adversarial Networks for Spatial Context-Aware Spectral Image Reconstruction from RGB			Type	Conference Article
	Year	2017	Publication	1st International Workshop on Physics Based Vision meets Deep Learning	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Hyperspectral signal reconstruction aims at recovering the original spectral input that produced a certain trichromatic (RGB) response from a capturing device or observer. Given the heavily underconstrained, non-linear nature of the problem, traditional techniques leverage different statistical properties of the spectral signal in order to build informative priors from real world object reflectances for constructing such RGB to spectral signal mapping. However, most of them treat each sample independently, and thus do not benefit from the contextual information that the spatial dimensions can provide. We pose hyperspectral natural image reconstruction as an image to image mapping learning problem, and apply a conditional generative adversarial framework to help capture spatial semantics. This is the first time Convolutional Neural Networks -and, particularly, Generative Adversarial Networks- are used to solve this task. Quantitative evaluation shows a Root Mean Squared Error (RMSE) drop of 44:7% and a Relative RMSE drop of 47:0% on the ICVL natural hyperspectral image dataset.
	Address	Venice; Italy; October 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICCV-PBDL
	Notes	LAMP; 600.109; 600.106; 600.120			Approved	no
	Call Number	Admin @ si @ AWG2017			Serial	2969
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	Author	Meysam Madadi; Sergio Escalera; Alex Carruesco; Carlos Andujar; Xavier Baro; Jordi Gonzalez
	Title	Occlusion Aware Hand Pose Recovery from Sequences of Depth Images			Type	Conference Article
	Year	2017	Publication	12th IEEE International Conference on Automatic Face and Gesture Recognition	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	State-of-the-art approaches on hand pose estimation from depth images have reported promising results under quite controlled considerations. In this paper we propose a two-step pipeline for recovering the hand pose from a sequence of depth images. The pipeline has been designed to deal with images taken from any viewpoint and exhibiting a high degree of finger occlusion. In a first step we initialize the hand pose using a part-based model, fitting a set of hand components in the depth images. In a second step we consider temporal data and estimate the parameters of a trained bilinear model consisting of shape and trajectory bases. Results on a synthetic, highly-occluded dataset demonstrate that the proposed method outperforms most recent pose recovering approaches, including those based on CNNs.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	FG
	Notes	HUPBA; ISE; 602.143; 600.098; 600.119			Approved	no
	Call Number	Admin @ si @ MEC2017			Serial	2970
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	Author	Laura Lopez-Fuentes; Sebastia Massanet; Manuel Gonzalez-Hidalgo
	Title	Image vignetting reduction via a maximization of fuzzy entropy			Type	Conference Article
	Year	2017	Publication	IEEE International Conference on Fuzzy Systems	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	In many computer vision applications, vignetting is an undesirable effect which must be removed in a pre-processing step. Recently, an algorithm for image vignetting correction has been presented by means of a minimization of log-intensity entropy. This method relies on an increase of the entropy of the image when it is affected with vignetting. In this paper, we propose a novel algorithm to reduce image vignetting via a maximization of the fuzzy entropy of the image. Fuzzy entropy quantifies the fuzziness degree of a fuzzy set and its value is also modified by the presence of vignetting. The experimental results show that this novel algorithm outperforms in most cases the algorithm based on the minimization of log-intensity entropy both from the qualitative and the quantitative point of view.
	Address	Napoles; Italia; July 2017
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	FUZZ-IEEE
	Notes	LAMP; 600.120			Approved	no
	Call Number	Admin @ si @ LMG2017			Serial	2972
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