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	Author	Enric Marti; Ferran Poveda; Antoni Gurgui; Debora Gil
	Title	Aprendizaje Basado en Proyectos en Ingeniería Informática. Resultados y reflexiones de seis años de experiencia			Type	Miscellaneous
	Year	2011	Publication	Actas del Simposio-Taller JENUI 2011	Abbreviated Journal
	Volume		Issue		Pages	1-8
	Keywords
	Abstract	In this workshop a 6 years experience in Project Based Learning (PBL) in Computer Graphics, Computer Engineering course at the Autonomous University of Barcelona (UAB) is presented. We use a Moodle environment suited to manage the documentation generated in PBL. The course is organized by means of two alternative routes: a classic itinerary of lectures and test-based evaluation and another with PBL. In the PBL itinerary we explain the organization in teamgroups, homework tutoring and monitoring and evaluation guidelines for students. We provide some of the work done by students, and the results of assessment surveys carried out to students during these years. We report the evolution of our PBL itinerary in terms of, both, organization and student surveys. The workshop aims at discussing about on the advantages and disadvantages of using these active methodologies in technical degrees such as computer engineering, in order to debate about the most suitable way of organizing PBL and assessing students learning rate.
	Address	Sevilla, Spain
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	spanish	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-84-694-5440-4	Medium
	Area		Expedition		Conference	JENUI
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ MPG2011			Serial	1584
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	Author	Aura Hernandez-Sabate; Monica Mitiko; Sergio Shiguemi; Debora Gil
	Title	A validation protocol for assessing cardiac phase retrieval in IntraVascular UltraSound			Type	Conference Article
	Year	2010	Publication	Computing in Cardiology	Abbreviated Journal
	Volume	37	Issue		Pages	899-902
	Keywords
	Abstract	A good reliable approach to cardiac triggering is of utmost importance in obtaining accurate quantitative results of atherosclerotic plaque burden from the analysis of IntraVascular UltraSound. Although, in the last years, there has been an increase in research of methods for retrospective gating, there is no general consensus in a validation protocol. Many methods are based on quality assessment of longitudinal cuts appearance and those reporting quantitative numbers do not follow a standard protocol. Such heterogeneity in validation protocols makes faithful comparison across methods a difficult task. We propose a validation protocol based on the variability of the retrieved cardiac phase and explore the capability of several quality measures for quantifying such variability. An ideal detector, suitable for its application in clinical practice, should produce stable phases. That is, it should always sample the same cardiac cycle fraction. In this context, one should measure the variability (variance) of a candidate sampling with respect a ground truth (reference) sampling, since the variance would indicate how spread we are aiming a target. In order to quantify the deviation between the sampling and the ground truth, we have considered two quality scores reported in the literature: signed distance to the closest reference sample and distance to the right of each reference sample. We have also considered the residuals of the regression line of reference against candidate sampling. The performance of the measures has been explored on a set of synthetic samplings covering different cardiac cycle fractions and variabilities. From our simulations, we conclude that the metrics related to distances are sensitive to the shift considered while the residuals are robust against fraction and variabilities as far as one can establish a pair-wise correspondence between candidate and reference. We will further investigate the impact of false positive and negative detections in experimental data.
	Address
	Corporate Author				Thesis
	Publisher	IEEE	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0276-6547	ISBN	978-1-4244-7318-2	Medium
	Area		Expedition		Conference	CINC
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ HSM2010			Serial	1551
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	Author	Jaume Garcia; Albert Andaluz; Debora Gil; Francesc Carreras
	Title	Decoupled External Forces in a Predictor-Corrector Segmentation Scheme for LV Contours in Tagged MR Images			Type	Conference Article
	Year	2010	Publication	32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society	Abbreviated Journal
	Volume		Issue		Pages	4805-4808
	Keywords
	Abstract	Computation of functional regional scores requires proper identification of LV contours. On one hand, manual segmentation is robust, but it is time consuming and requires high expertise. On the other hand, the tag pattern in TMR sequences is a problem for automatic segmentation of LV boundaries. We propose a segmentation method based on a predictorcorrector (Active Contours – Shape Models) scheme. Special stress is put in the definition of the AC external forces. First, we introduce a semantic description of the LV that discriminates myocardial tissue by using texture and motion descriptors. Second, in order to ensure convergence regardless of the initial contour, the external energy is decoupled according to the orientation of the edges in the image potential. We have validated the model in terms of error in segmented contours and accuracy of regional clinical scores.
	Address	Buenos Aires (Argentina)
	Corporate Author	IEEE EMB			Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1557-170X	ISBN	978-1-4244-4123-5	Medium
	Area		Expedition		Conference	EMBC
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GAG2010			Serial	1514
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	Author	Sergio Vera; Debora Gil; Antonio Lopez; Miguel Angel Gonzalez Ballester
	Title	Multilocal Creaseness Measure			Type	Journal
	Year	2012	Publication	The Insight Journal	Abbreviated Journal	IJ
	Volume		Issue		Pages
	Keywords	Ridges, Valley, Creaseness, Structure Tensor, Skeleton,
	Abstract	This document describes the implementation using the Insight Toolkit of an algorithm for detecting creases (ridges and valleys) in N-dimensional images, based on the Local Structure Tensor of the image. In addition to the filter used to calculate the creaseness image, a filter for the computation of the structure tensor is also included in this submission.
	Address
	Corporate Author	Alma IT Systems			Thesis
	Publisher		Place of Publication		Editor
	Language	english	Summary Language	english	Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;ADAS;			Approved	no
	Call Number	IAM @ iam @ VGL2012			Serial	1840
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	Author	A. M. Here; B. C. Lopez; Debora Gil; J. J. Camarero; Jordi Martinez-Vilalta
	Title	A new software to analyse wood anatomical features in conifer species			Type	Conference Article
	Year	2013	Publication	International Symposium on Wood Structure in Plant Biology and Ecology	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	International Symposium on Wood Structure in Plant Biology and Ecology
	Address	Naples; Italy; March 2013
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	WSE
	Notes	IAM			Approved	no
	Call Number	Admin @ si @ HLG2013			Serial	2303
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	Author	Albert Andaluz; Francesc Carreras; Debora Gil; Jaume Garcia
	Title	Una aplicació amigable pel càlcul de indicadors clínics del ventricle esquerre			Type	Miscellaneous
	Year	2010	Publication	Forum Biocat 2010	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Lonja de Mar,Barcelona (Spain)
	Corporate Author	CVC			Thesis
	Publisher	Biocat	Place of Publication	Barcelona	Editor
	Language	Catalan	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ ACG2010			Serial	1483
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	Author	David Roche; Debora Gil; Jesus Giraldo
	Title	Multiple active receptor conformation, agonist efficacy and maximum effect of the system: the conformation-based operational model of agonism,			Type	Journal Article
	Year	2013	Publication	Drug Discovery Today	Abbreviated Journal	DDT
	Volume	18	Issue	7-8	Pages	365-371
	Keywords
	Abstract	The operational model of agonism assumes that the maximum effect a particular receptor system can achieve (the Em parameter) is fixed. Em estimates are above but close to the asymptotic maximum effects of endogenous agonists. The concept of Em is contradicted by superagonists and those positive allosteric modulators that significantly increase the maximum effect of endogenous agonists. An extension of the operational model is proposed that assumes that the Em parameter does not necessarily have a single value for a receptor system but has multiple values associated to multiple active receptor conformations. The model provides a mechanistic link between active receptor conformation and agonist efficacy, which can be useful for the analysis of agonist response under different receptor scenarios.
	Address
	Corporate Author				Thesis
	Publisher	Elsevier	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.057; 600.054			Approved	no
	Call Number	IAM @ iam @ RGG2013a			Serial	2190
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	Author	Aura Hernandez-Sabate; Petia Radeva; Antonio Tovar; Debora Gil
	Title	Vessel structures alignment by spectral analysis of ivus sequences			Type	Conference Article
	Year	2006	Publication	Proc. of CVII, MICCAI Workshop	Abbreviated Journal
	Volume		Issue		Pages	39-36
	Keywords
	Abstract	Three-dimensional intravascular ultrasound (IVUS) allows to visualize and obtain volumetric measurements of coronary lesions through an exploration of the cross sections and longitudinal views of arteries. However, the visualization and subsequent morpho-geometric measurements in IVUS longitudinal cuts are subject to distortion caused by periodic image/vessel motion around the IVUS catheter. Usually, to overcome the image motion artifact ECG-gating and image-gated approaches are proposed, leading to slowing the pullback acquisition or disregarding part of IVUS data. In this paper, we argue that the image motion is due to 3-D vessel geometry as well as cardiac dynamics, and propose a dynamic model based on the tracking of an elliptical vessel approximation to recover the rigid transformation and align IVUS images without loosing any IVUS data. We report an extensive validation with synthetic simulated data and in vivo IVUS sequences of 30 patients achieving an average reduction of the image artifact of 97% in synthetic data and 79% in real-data. Our study shows that IVUS alignment improves longitudinal analysis of the IVUS data and is a necessary step towards accurate reconstruction and volumetric measurements of 3-D IVUS.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Copenhaguen (Denmark),	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title	1st International Wokshop on Computer Vision for Intravascular and Intracardiac Imaging (CVII’06)	Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; MILAB			Approved	no
	Call Number	IAM @ iam @ HRT2006			Serial	1552
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	Author	Aura Hernandez-Sabate; Debora Gil; David Roche; Monica M. S. Matsumoto; Sergio S. Furuie
	Title	Inferring the Performance of Medical Imaging Algorithms			Type	Conference Article
	Year	2011	Publication	14th International Conference on Computer Analysis of Images and Patterns	Abbreviated Journal
	Volume	6854	Issue		Pages	520-528
	Keywords	Validation, Statistical Inference, Medical Imaging Algorithms.
	Abstract	Evaluation of the performance and limitations of medical imaging algorithms is essential to estimate their impact in social, economic or clinical aspects. However, validation of medical imaging techniques is a challenging task due to the variety of imaging and clinical problems involved, as well as, the difficulties for systematically extracting a reliable solely ground truth. Although specific validation protocols are reported in any medical imaging paper, there are still two major concerns: definition of standardized methodologies transversal to all problems and generalization of conclusions to the whole clinical data set. We claim that both issues would be fully solved if we had a statistical model relating ground truth and the output of computational imaging techniques. Such a statistical model could conclude to what extent the algorithm behaves like the ground truth from the analysis of a sampling of the validation data set. We present a statistical inference framework reporting the agreement and describing the relationship of two quantities. We show its transversality by applying it to validation of two different tasks: contour segmentation and landmark correspondence.
	Address	Sevilla
	Corporate Author				Thesis
	Publisher	Springer-Verlag Berlin Heidelberg	Place of Publication	Berlin	Editor	Pedro Real; Daniel Diaz-Pernil; Helena Molina-Abril; Ainhoa Berciano; Walter Kropatsch
	Language		Summary Language		Original Title
	Series Editor		Series Title	L	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CAIP
	Notes	IAM; ADAS			Approved	no
	Call Number	IAM @ iam @ HGR2011			Serial	1676
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	Author	Ferran Poveda; Debora Gil ;Albert Andaluz ;Enric Marti
	Title	Multiscale Tractography for Representing Heart Muscular Architecture			Type	Conference Article
	Year	2011	Publication	In MICCAI 2011 Workshop on Computational Diffusion MRI	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Deep understanding of myocardial structure of the heart would unravel crucial knowledge for clinical and medical procedures. Although the muscular architecture of the heart has been debated by countless researchers, the controversy is still alive. Diﬀusion Tensor MRI, DT-MRI, is a unique imaging technique for computational validation of the muscular structure of the heart. By the complex arrangement of myocites, existing techniques can not provide comprehensive descriptions of the global muscular architecture. In this paper we introduce a multiresolution reconstruction technique based on DT-MRI streamlining for simpliﬁed global myocardial model generation. Our reconstructions can restore the most complex myocardial structures and indicate a global helical organization
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language	english	Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CDRMI
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ PGA2011			Serial	1681
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	Author	Debora Gil; Petia Radeva; Jordi Saludes; Josefina Mauri
	Title	Automatic Segmentation of Artery Wall in Coronary IVUS Images: A Probabilistic Approach			Type	Conference Article
	Year	2000	Publication	International Conference on Pattern Recognition	Abbreviated Journal
	Volume	4	Issue		Pages	352-355
	Keywords
	Abstract	Intravascular ultrasound images represent a unique tool to analyze the morphology of arteries and vessels (plaques, restenosis, etc). The poor quality of these images makes unsupervised segmentation based on traditional segmentation algorithms (such as edge or ridge/valley detection) fail to achieve the expected results. In this paper we present a probabilistic flexible template to separate different regions in the image. In particular, we use elliptic templates to model and detect the shape of the vessel inner wall in IVUS images. We present the results of successful segmentation obtained from patients undergoing stent treatment. A physician team has validated these results.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ GRS2000a			Serial	1537
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	Author	Debora Gil; Petia Radeva
	Title	Curvature Vector Flow to Assure Convergent Deformable Models for Shape Modelling			Type	Book Chapter
	Year	2003	Publication	Energy Minimization Methods In Computer Vision And Pattern Recognition	Abbreviated Journal	LNCS
	Volume	2683	Issue		Pages	357-372
	Keywords	Initial condition; Convex shape; Non convex analysis; Increase; Segmentation; Gradient; Standard; Standards; Concave shape; Flow models; Tracking; Edge detection; Curvature
	Abstract	Poor convergence to concave shapes is a main limitation of snakes as a standard segmentation and shape modelling technique. The gradient of the external energy of the snake represents a force that pushes the snake into concave regions, as its internal energy increases when new inexion points are created. In spite of the improvement of the external energy by the gradient vector ow technique, highly non convex shapes can not be obtained, yet. In the present paper, we develop a new external energy based on the geometry of the curve to be modelled. By tracking back the deformation of a curve that evolves by minimum curvature ow, we construct a distance map that encapsulates the natural way of adapting to non convex shapes. The gradient of this map, which we call curvature vector ow (CVF), is capable of attracting a snake towards any contour, whatever its geometry. Our experiments show that, any initial snake condition converges to the curve to be modelled in optimal time.
	Address
	Corporate Author				Thesis
	Publisher	Springer, Berlin	Place of Publication	Lisbon, PORTUGAL	Editor	Springer, B.
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	3-540-40498-8	Medium
	Area		Expedition		Conference
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ GIR2003b			Serial	1535
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	Author	David Roche; Debora Gil; Jesus Giraldo
	Title	An inference model for analyzing termination conditions of Evolutionary Algorithms			Type	Conference Article
	Year	2011	Publication	14th Congrès Català en Intel·ligencia Artificial	Abbreviated Journal
	Volume		Issue		Pages	216-225
	Keywords	Evolutionary Computation Convergence, Termination Conditions, Statistical Inference
	Abstract	In real-world problems, it is mandatory to design a termination condition for Evolutionary Algorithms (EAs) ensuring stabilization close to the unknown optimum. Distribution-based quantities are good candidates as far as suitable parameters are used. A main limitation for application to real-world problems is that such parameters strongly depend on the topology of the objective function, as well as, the EA paradigm used. We claim that the termination problem would be fully solved if we had a model measuring to what extent a distribution-based quantity asymptotically behaves like the solution accuracy. We present a regression-prediction model that relates any two given quantities and reports if they can be statistically swapped as termination conditions. Our framework is applied to two issues. First, exploring if the parameters involved in the computation of distribution-based quantities influence their asymptotic behavior. Second, to what extent existing distribution-based quantities can be asymptotically exchanged for the accuracy of the EA solution.
	Address	Lleida, Catalonia (Spain)
	Corporate Author	Associació Catalana Intel·ligència Artificial			Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-1-60750-841-0	Medium
	Area		Expedition		Conference	CCIA
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ RGG2011a			Serial	1677
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	Author	Antoni Gurgui; Debora Gil; Enric Marti
	Title	Laplacian Unitary Domain for Texture Morphing			Type	Conference Article
	Year	2015	Publication	Proceedings of the 10th International Conference on Computer Vision Theory and Applications VISIGRAPP2015	Abbreviated Journal
	Volume	1	Issue		Pages	693-699
	Keywords	Facial; metamorphosis;LaplacianMorphing
	Abstract	Deformation of expressive textures is the gateway to realistic computer synthesis of expressions. By their good mathematical properties and flexible formulation on irregular meshes, most texture mappings rely on solutions to the Laplacian in the cartesian space. In the context of facial expression morphing, this approximation can be seen from the opposite point of view by neglecting the metric. In this paper, we use the properties of the Laplacian in manifolds to present a novel approach to warping expressive facial images in order to generate a morphing between them.
	Address	Munich; Germany; February 2015
	Corporate Author				Thesis
	Publisher	SciTePress	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-989-758-089-5	Medium
	Area		Expedition		Conference	VISAPP
	Notes	IAM; 600.075			Approved	no
	Call Number	Admin @ si @ GGM2015			Serial	2614
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	Author	Misael Rosales; Petia Radeva; Oriol Rodriguez; Debora Gil
	Title	Suppression of IVUS Image Rotation. A Kinematic Approach			Type	Book Chapter
	Year	2005	Publication	Functional Imaging and Modeling of the Heart	Abbreviated Journal	LNCS
	Volume	3504	Issue		Pages	889-892
	Keywords
	Abstract	IntraVascular Ultrasound (IVUS) is an exploratory technique used in interventional procedures that shows cross section images of arteries and provides qualitative information about the causes and severity of the arterial lumen narrowing. Cross section analysis as well as visualization of plaque extension in a vessel segment during the catheter imaging pullback are the technique main advantages. However, IVUS sequence exhibits a periodic rotation artifact that makes difficult the longitudinal lesion inspection and hinders any segmentation algorithm. In this paper we propose a new kinematic method to estimate and remove the image rotation of IVUS images sequences. Results on several IVUS sequences show good results and prompt some of the clinical applications to vessel dynamics study, and relation to vessel pathology.
	Address
	Corporate Author				Thesis
	Publisher	Springer Berlin / Heidelberg	Place of Publication		Editor	Frangi, Alejandro and Radeva, Petia and Santos, Andres and Hernandez, Monica
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume	3504	Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ RRR2005			Serial	1645
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