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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	A Region Segmentation Method for Colonoscopy Images Using a Model of Polyp Appearance			Type	Conference Article
	Year	2011	Publication	5th Iberian Conference on Pattern Recognition and Image Analysis	Abbreviated Journal
	Volume	6669	Issue		Pages	134-143
	Keywords	Colonoscopy, Polyp Detection, Region Merging, Region Segmentation.
	Abstract	This work aims at the segmentation of colonoscopy images into a minimum number of informative regions. Our method performs in a way such, if a polyp is present in the image, it will be exclusively and totally contained in a single region. This result can be used in later stages to classify regions as polyp-containing candidates. The output of the algorithm also defines which regions can be considered as non-informative. The algorithm starts with a high number of initial regions and merges them taking into account the model of polyp appearance obtained from available data. The results show that our segmentations of polyp regions are more accurate than state-of-the-art methods.
	Address	Las Palmas de Gran Canaria, June 2011
	Corporate Author	SpringerLink			Thesis
	Publisher		Place of Publication		Editor	Vitrià, Jordi and Sanches, João and Hernández, Mario
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-642-21256-7	Medium
	Area	800	Expedition		Conference	IbPRIA
	Notes	MV;SIAI			Approved	no
	Call Number	IAM @ iam @ BSV2011c			Serial	1696
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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Integration of Valley Orientation Distribution for Polyp Region Identification in Colonoscopy			Type	Conference Article
	Year	2011	Publication	In MICCAI 2011 Workshop on Computational and Clinical Applications in Abdominal Imaging	Abbreviated Journal
	Volume	6668	Issue		Pages	76-83
	Keywords
	Abstract	This work presents a region descriptor based on the integration of the information that the depth of valleys image provides. The depth of valleys image is based on the presence of intensity valleys around polyps due to the image acquisition. Our proposed method consists of defining, for each point, a series of radial sectors around it and then accumulates the maxima of the depth of valleys image only if the orientation of the intensity valley coincides with the orientation of the sector above. We apply our descriptor to a prior segmentation of the images and we present promising results on polyp detection, outperforming other approaches that also integrate depth of valleys information.
	Address	Toronto, Canada
	Corporate Author				Thesis
	Publisher	Springer Link	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	ABI
	Notes	MV;SIAI			Approved	no
	Call Number	IAM @ iam @ BSV2011d			Serial	1698
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	Author	Sergio Vera; Debora Gil; Agnes Borras; F. Javier Sanchez; Frederic Perez; Marius G. Linguraru; Miguel Angel Gonzalez Ballester
	Title	Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs			Type	Book Chapter
	Year	2012	Publication	Workshop on Computational and Clinical Applications in Abdominal Imaging	Abbreviated Journal
	Volume	7029	Issue		Pages	223–230
	Keywords	medial manifolds, abdomen.
	Abstract	Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations.
	Address	Toronto; Canada;
	Corporate Author				Thesis
	Publisher	Springer Link	Place of Publication	Berlin	Editor	H. Yoshida et al
	Language	English	Summary Language	English	Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-28556-1	Medium
	Area		Expedition		Conference	ABDI
	Notes	IAM;MV			Approved	no
	Call Number	IAM @ iam @ VGB2012			Serial	1834
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	Author	Carles Sanchez;F. Javier Sanchez; Antoni Rosell; Debora Gil
	Title	An illumination model of the trachea appearance in videobronchoscopy images			Type	Book Chapter
	Year	2012	Publication	Image Analysis and Recognition	Abbreviated Journal	LNCS
	Volume	7325	Issue		Pages	313-320
	Keywords	Bronchoscopy, tracheal ring, stenosis assesment, trachea appearance model, segmentation
	Abstract	Videobronchoscopy is a medical imaging technique that allows interactive navigation inside the respiratory pathways. This imaging modality provides realistic images and allows non-invasive minimal intervention procedures. Tracheal procedures are routinary interventions that require assessment of the percentage of obstructed pathway for injury (stenosis) detection. Visual assessment in videobronchoscopic sequences requires high expertise of trachea anatomy and is prone to human error. This paper introduces an automatic method for the estimation of steneosed trachea percentage reduction in videobronchoscopic images. We look for tracheal rings , whose deformation determines the degree of obstruction. For ring extraction , we present a ring detector based on an illumination and appearance model. This model allows us to parametrise the ring detection. Finally, we can infer optimal estimation parameters for any video resolution.
	Address	Aveiro, Portugal
	Corporate Author				Thesis
	Publisher	Springer Berlin Heidelberg	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-31297-7	Medium
	Area	800	Expedition		Conference	ICIAR
	Notes	MV;IAM			Approved	no
	Call Number	IAM @ iam @ SSR2012			Serial	1898
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	Author	Patricia Marquez; Debora Gil ; Aura Hernandez-Sabate
	Title	Error Analysis for Lucas-Kanade Based Schemes			Type	Conference Article
	Year	2012	Publication	9th International Conference on Image Analysis and Recognition	Abbreviated Journal
	Volume	7324	Issue	I	Pages	184-191
	Keywords	Optical flow, Confidence measure, Lucas-Kanade, Cardiac Magnetic Resonance
	Abstract	Optical flow is a valuable tool for motion analysis in medical imaging sequences. A reliable application requires determining the accuracy of the computed optical flow. This is a main challenge given the absence of ground truth in medical sequences. This paper presents an error analysis of Lucas-Kanade schemes in terms of intrinsic design errors and numerical stability of the algorithm. Our analysis provides a confidence measure that is naturally correlated to the accuracy of the flow field. Our experiments show the higher predictive value of our confidence measure compared to existing measures.
	Address	Aveiro, Portugal
	Corporate Author				Thesis
	Publisher	Springer-Verlag Berlin Heidelberg	Place of Publication		Editor
	Language	english	Summary Language		Original Title
	Series Editor	Campilho, Aurélio and Kamel, Mohamed	Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-31294-6	Medium
	Area		Expedition		Conference	ICIAR
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ MGH2012a			Serial	1899
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	Author	Jean-Marc Ogier; Wenyin Liu; Josep Llados (eds)
	Title	Graphics Recognition: Achievements, Challenges, and Evolution			Type	Book Whole
	Year	2010	Publication	8th International Workshop GREC 2009.	Abbreviated Journal
	Volume	6020	Issue		Pages
	Keywords
	Abstract
	Address	La Rochelle
	Corporate Author				Thesis
	Publisher	Springer Link	Place of Publication		Editor	Jean-Marc Ogier; Wenyin Liu; Josep Llados
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-642-13727-3	Medium
	Area		Expedition		Conference	GREC
	Notes	DAG			Approved	no
	Call Number	Admin @ si @ OLL2010			Serial	1976
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	Author	Sergio Vera; Miguel Angel Gonzalez Ballester; Debora Gil
	Title	Optimal Medial Surface Generation for Anatomical Volume Representations			Type	Book Chapter
	Year	2012	Publication	Abdominal Imaging. Computational and Clinical Applications	Abbreviated Journal	LNCS
	Volume	7601	Issue		Pages	265-273
	Keywords	Medial surface representation; volume reconstruction
	Abstract	Medial representations are a widely used technique in abdominal organ shape representation and parametrization. Those methods require good medial manifolds as a starting point. Any medial surface used to parametrize a volume should be simple enough to allow an easy manipulation and complete enough to allow an accurate reconstruction of the volume. Obtaining good quality medial surfaces is still a problem with current iterative thinning methods. This forces the usage of generic, pre-calculated medial templates that are adapted to the final shape at the cost of a drop in volume reconstruction. This paper describes an operator for generation of medial structures that generates clean and complete manifolds well suited for their further use in medial representations of abdominal organ volumes. While being simpler than thinning surfaces, experiments show its high performance in volume reconstruction and preservation of medial surface main branching topology.
	Address	Nice, France
	Corporate Author				Thesis
	Publisher	Springer Berlin Heidelberg	Place of Publication		Editor	Yoshida, Hiroyuki and Hawkes, David and Vannier, MichaelW.
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-33611-9	Medium
	Area		Expedition		Conference	STACOM
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ VGG2012b			Serial	1988
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	Author	Aura Hernandez-Sabate; Debora Gil; David Roche; Monica M. S. Matsumoto; Sergio S. Furuie
	Title	Inferring the Performance of Medical Imaging Algorithms			Type	Conference Article
	Year	2011	Publication	14th International Conference on Computer Analysis of Images and Patterns	Abbreviated Journal
	Volume	6854	Issue		Pages	520-528
	Keywords	Validation, Statistical Inference, Medical Imaging Algorithms.
	Abstract	Evaluation of the performance and limitations of medical imaging algorithms is essential to estimate their impact in social, economic or clinical aspects. However, validation of medical imaging techniques is a challenging task due to the variety of imaging and clinical problems involved, as well as, the difficulties for systematically extracting a reliable solely ground truth. Although specific validation protocols are reported in any medical imaging paper, there are still two major concerns: definition of standardized methodologies transversal to all problems and generalization of conclusions to the whole clinical data set. We claim that both issues would be fully solved if we had a statistical model relating ground truth and the output of computational imaging techniques. Such a statistical model could conclude to what extent the algorithm behaves like the ground truth from the analysis of a sampling of the validation data set. We present a statistical inference framework reporting the agreement and describing the relationship of two quantities. We show its transversality by applying it to validation of two different tasks: contour segmentation and landmark correspondence.
	Address	Sevilla
	Corporate Author				Thesis
	Publisher	Springer-Verlag Berlin Heidelberg	Place of Publication	Berlin	Editor	Pedro Real; Daniel Diaz-Pernil; Helena Molina-Abril; Ainhoa Berciano; Walter Kropatsch
	Language		Summary Language		Original Title
	Series Editor		Series Title	L	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CAIP
	Notes	IAM; ADAS			Approved	no
	Call Number	IAM @ iam @ HGR2011			Serial	1676
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	Author	Jordina Torrents-Barrena; Aida Valls; Petia Radeva; Meritxell Arenas; Domenec Puig
	Title	Automatic Recognition of Molecular Subtypes of Breast Cancer in X-Ray images using Segmentation-based Fractal Texture Analysis			Type	Book Chapter
	Year	2015	Publication	Artificial Intelligence Research and Development	Abbreviated Journal
	Volume	277	Issue		Pages	247 - 256
	Keywords
	Abstract	Breast cancer disease has recently been classified into four subtypes regarding the molecular properties of the affected tumor region. For each patient, an accurate diagnosis of the specific type is vital to decide the most appropriate therapy in order to enhance life prospects. Nowadays, advanced therapeutic diagnosis research is focused on gene selection methods, which are not robust enough. Hence, we hypothesize that computer vision algorithms can offer benefits to address the problem of discriminating among them through X-Ray images. In this paper, we propose a novel approach driven by texture feature descriptors and machine learning techniques. First, we segment the tumour part through an active contour technique and then, we perform a complete fractal analysis to collect qualitative information of the region of interest in the feature extraction stage. Finally, several supervised and unsupervised classifiers are used to perform multiclass classification of the aforementioned data. The experimental results presented in this paper support that it is possible to establish a relation between each tumor subtype and the extracted features of the patterns revealed on mammograms.
	Address
	Corporate Author				Thesis
	Publisher	IOS Press	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title	Frontiers in Artificial Intelligence and Applications	Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB			Approved	no
	Call Number	Admin @ si @TVR2015			Serial	2780
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	Author	Debora Gil; Jordi Gonzalez; Gemma Sanchez (eds)
	Title	Computer Vision: Advances in Research and Development			Type	Book Whole
	Year	2007	Publication	Proceedings of the 2nd CVC International Workshop	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher	UAB	Place of Publication	Bellaterra (Spain)	Editor	Debora Gil; Jordi Gonzalez; Gemma Sanchez
	Language		Summary Language		Original Title
	Series Editor		Series Title	2	Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-84-935251-4-9	Medium
	Area		Expedition		Conference
	Notes	IAM; ISE; DAG			Approved	no
	Call Number	IAM @ iam @ GGS2007			Serial	1493
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	Author	Aura Hernandez-Sabate; Petia Radeva; Antonio Tovar; Debora Gil
	Title	Vessel structures alignment by spectral analysis of ivus sequences			Type	Conference Article
	Year	2006	Publication	Proc. of CVII, MICCAI Workshop	Abbreviated Journal
	Volume		Issue		Pages	39-36
	Keywords
	Abstract	Three-dimensional intravascular ultrasound (IVUS) allows to visualize and obtain volumetric measurements of coronary lesions through an exploration of the cross sections and longitudinal views of arteries. However, the visualization and subsequent morpho-geometric measurements in IVUS longitudinal cuts are subject to distortion caused by periodic image/vessel motion around the IVUS catheter. Usually, to overcome the image motion artifact ECG-gating and image-gated approaches are proposed, leading to slowing the pullback acquisition or disregarding part of IVUS data. In this paper, we argue that the image motion is due to 3-D vessel geometry as well as cardiac dynamics, and propose a dynamic model based on the tracking of an elliptical vessel approximation to recover the rigid transformation and align IVUS images without loosing any IVUS data. We report an extensive validation with synthetic simulated data and in vivo IVUS sequences of 30 patients achieving an average reduction of the image artifact of 97% in synthetic data and 79% in real-data. Our study shows that IVUS alignment improves longitudinal analysis of the IVUS data and is a necessary step towards accurate reconstruction and volumetric measurements of 3-D IVUS.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Copenhaguen (Denmark),	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title	1st International Wokshop on Computer Vision for Intravascular and Intracardiac Imaging (CVII’06)	Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; MILAB			Approved	no
	Call Number	IAM @ iam @ HRT2006			Serial	1552
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	Author	Josep Llados; J. Lopez-Krahe; Enric Marti
	Title	A Hough-based method for hatched pattern detection in maps and diagrams.			Type	Miscellaneous
	Year	1999	Publication	Proceedings of the International Conference on Document Analysis and Recognition.	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Bangalore-India
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG			Approved	no
	Call Number	DAG @ dag @ LlM1999b			Serial	1
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	Author	Felipe Lumbreras; Ramon Baldrich; Maria Vanrell; Joan Serrat; Juan J. Villanueva
	Title	Multiresolution colour texture representations for tile classification			Type	Miscellaneous
	Year	1999	Publication	Proceedings of the VIII Symposium Nacional de Reconocimiento de Formas y Analisis de Imagenes	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Bilbao
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS;CIC			Approved	no
	Call Number	ADAS @ adas @ LBV1999a			Serial	3
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	Author	Daniel Ponsa; A.F. Sole; Antonio Lopez; Cristina Cañero; Petia Radeva; Jordi Vitria
	Title	Regularized EM			Type	Miscellaneous
	Year	1999	Publication	Proceedings of the VIII Symposium Nacional de Reconocimiento de Formas y Analisis de Imagenes	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Bilbao
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	invisible;ADAS;OR;MILAB;MV			Approved	no
	Call Number	ADAS @ adas @ PSL1999			Serial	4
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	Author	David Guillamet; Jordi Vitria
	Title	Using Eigenspace analysis of color distributions for object recognition			Type	Miscellaneous
	Year	1999	Publication	Proceedings of the VIII Symposium Nacional de Reconocimiento de Formas y Analisis de Imagenes	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Bilbao
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	OR;MV			Approved	no
	Call Number	BCNPCL @ bcnpcl @ GuV1999a			Serial	5
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