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	Author	Laura Igual; Joan Carles Soliva; Roger Gimeno; Sergio Escalera; Oscar Vilarroya; Petia Radeva
	Title	Automatic Internal Segmentation of Caudate Nucleus for Diagnosis of Attention Deficit Hyperactivity Disorder			Type	Conference Article
	Year	2012	Publication	9th International Conference on Image Analysis and Recognition	Abbreviated Journal
	Volume	7325	Issue	II	Pages	222-229
	Keywords
	Abstract	Poster Studies on volumetric brain Magnetic Resonance Imaging (MRI) showed neuroanatomical abnormalities in pediatric Attention-Deficit/Hyperactivity Disorder (ADHD). In particular, the diminished right caudate volume is one of the most replicated findings among ADHD samples in morphometric MRI studies. In this paper, we propose a fully-automatic method for internal caudate nucleus segmentation based on machine learning. Moreover, the ratio between right caudate body volume and the bilateral caudate body volume is applied in a ADHD diagnostic test. We separately validate the automatic internal segmentation of caudate in head and body structures and the diagnostic test using real data from ADHD and control subjects. As a result, we show accurate internal caudate segmentation and similar performance among the proposed automatic diagnostic test and the manual annotation.
	Address	Aveiro, Portugal
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-31297-7	Medium
	Area		Expedition		Conference	ICIAR
	Notes	OR; HuPBA; MILAB			Approved	no
	Call Number	Admin @ si @ ISG2012			Serial	2059
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	Author	Laura Igual; Joan Carles Soliva; Sergio Escalera; Roger Gimeno; Oscar Vilarroya; Petia Radeva
	Title	Automatic Brain Caudate Nuclei Segmentation and Classification in Diagnostic of Attention-Deficit/Hyperactivity Disorder			Type	Journal Article
	Year	2012	Publication	Computerized Medical Imaging and Graphics	Abbreviated Journal	CMIG
	Volume	36	Issue	8	Pages	591-600
	Keywords	Automatic caudate segmentation; Attention-Deficit/Hyperactivity Disorder; Diagnostic test; Machine learning; Decision stumps; Dissociated dipoles
	Abstract	We present a fully automatic diagnostic imaging test for Attention-Deficit/Hyperactivity Disorder diagnosis assistance based on previously found evidences of caudate nucleus volumetric abnormalities. The proposed method consists of different steps: a new automatic method for external and internal segmentation of caudate based on Machine Learning methodologies; the definition of a set of new volume relation features, 3D Dissociated Dipoles, used for caudate representation and classification. We separately validate the contributions using real data from a pediatric population and show precise internal caudate segmentation and discrimination power of the diagnostic test, showing significant performance improvements in comparison to other state-of-the-art methods.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	OR; HuPBA; MILAB			Approved	no
	Call Number	Admin @ si @ ISE2012			Serial	2143
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	Author	Jorge Bernal; F. Javier Sanchez; Fernando Vilariño
	Title	Towards Automatic Polyp Detection with a Polyp Appearance Model			Type	Journal Article
	Year	2012	Publication	Pattern Recognition	Abbreviated Journal	PR
	Volume	45	Issue	9	Pages	3166-3182
	Keywords	Colonoscopy,PolypDetection,RegionSegmentation,SA-DOVA descriptot
	Abstract	This work aims at the automatic polyp detection by using a model of polyp appearance in the context of the analysis of colonoscopy videos. Our method consists of three stages: region segmentation, region description and region classification. The performance of our region segmentation method guarantees that if a polyp is present in the image, it will be exclusively and totally contained in a single region. The output of the algorithm also defines which regions can be considered as non-informative. We define as our region descriptor the novel Sector Accumulation-Depth of Valleys Accumulation (SA-DOVA), which provides a necessary but not sufficient condition for the polyp presence. Finally, we classify our segmented regions according to the maximal values of the SA-DOVA descriptor. Our preliminary classification results are promising, especially when classifying those parts of the image that do not contain a polyp inside.
	Address
	Corporate Author				Thesis
	Publisher	Elsevier	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0031-3203	ISBN		Medium
	Area	800	Expedition		Conference	IbPRIA
	Notes	MV;SIAI			Approved	no
	Call Number	Admin @ si @ BSV2012; IAM @ iam			Serial	1997
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	Author	Carles Sanchez;F. Javier Sanchez; Antoni Rosell; Debora Gil
	Title	An illumination model of the trachea appearance in videobronchoscopy images			Type	Book Chapter
	Year	2012	Publication	Image Analysis and Recognition	Abbreviated Journal	LNCS
	Volume	7325	Issue		Pages	313-320
	Keywords	Bronchoscopy, tracheal ring, stenosis assesment, trachea appearance model, segmentation
	Abstract	Videobronchoscopy is a medical imaging technique that allows interactive navigation inside the respiratory pathways. This imaging modality provides realistic images and allows non-invasive minimal intervention procedures. Tracheal procedures are routinary interventions that require assessment of the percentage of obstructed pathway for injury (stenosis) detection. Visual assessment in videobronchoscopic sequences requires high expertise of trachea anatomy and is prone to human error. This paper introduces an automatic method for the estimation of steneosed trachea percentage reduction in videobronchoscopic images. We look for tracheal rings , whose deformation determines the degree of obstruction. For ring extraction , we present a ring detector based on an illumination and appearance model. This model allows us to parametrise the ring detection. Finally, we can infer optimal estimation parameters for any video resolution.
	Address	Aveiro, Portugal
	Corporate Author				Thesis
	Publisher	Springer Berlin Heidelberg	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-31297-7	Medium
	Area	800	Expedition		Conference	ICIAR
	Notes	MV;IAM			Approved	no
	Call Number	IAM @ iam @ SSR2012			Serial	1898
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	Author	Francesc Tanarro Marquez; Pau Gratacos Marti; F. Javier Sanchez; Joan Ramon Jimenez Minguell; Coen Antens; Enric Sala i Esteva
	Title	A device for monitoring condition of a railway supply			Type	Patent
	Year	2012	Publication	EP 2 404 777 A1	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	of a railway supply line when the supply line is in contact with a head of a pantograph of a vehicle in order to power said vehicle . The device includes a camera ( for monitoring parameters indicative of operating capability of said supply line. The device is intended to monitor condition tive of operating capability of said supply line. The device includes a reflective element. comprising a pattern , intended to be arranged onto the pantograph head . The camera is intended to be arranged on the vehicle (10) so as to register the pattern position regarding a vertical direction.
	Address
	Corporate Author	ALSTOM Transport SA			Thesis
	Publisher	European Patent Office	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MV			Approved	no
	Call Number	IAM @ iam @ MMS2012			Serial	1854
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	Author	Onur Ferhat
	Title	Eye-Tracking with Webcam-Based Setups: Implementation of a Real-Time System and an Analysis of Factors Affecting Performance			Type	Report
	Year	2012	Publication	CVC Technical Report	Abbreviated Journal
	Volume	172	Issue		Pages
	Keywords	Computer vision, eye-tracking, gaussian process, feature selection, optical flow
	Abstract	In the recent years commercial eye-tracking hardware has become more common, with the introduction of new models from several brands that have better performance and easier setup procedures. A cause and at the same time a result of this phenomenon is the popularity of eye-tracking research directed at marketing, accessibility and usability, among others. One problem with these hardware components is scalability, because both the price and the necessary expertise to operate them makes it practically impossible in the large scale. In this work, we analyze the feasibility of a software eye-tracking system based on a single, ordinary webcam. Our aim is to discover the limits of such a system and to see whether it provides acceptable performances. The significance of this setup is that it is the most common setup found in consumer environments, off-the-shelf electronic devices such as laptops, mobile phones and tablet computers. As no special equipment such as infrared lights, mirrors or zoom lenses are used; setting up and calibrating the system is easier compared to other approaches using these components. Our work is based on the open source application Opengazer, which provides a good starting point for our contributions. We propose several improvements in order to push the system's performance further and make it feasible as a robust, real-time device. Then we carry out an elaborate experiment involving 18 human subjects and 4 different system setups. Finally, we give an analysis of the results and discuss the effects of setup changes, subject differences and modifications in the software.
	Address	Bellaterra
	Corporate Author	Computer Vision Center			Thesis	Master's thesis
	Publisher		Place of Publication		Editor	Fernando Vilariño
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MV			Approved	no
	Call Number	Admin @ si @ Fer2012; IAM @ iam @ Fer2012			Serial	2165
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	Author	Jorge Bernal
	Title	Polyp Localization and Segmentation in Colonoscopy Images by Means of a Model of Appearance for Polyps			Type	Book Whole
	Year	2012	Publication	PhD Thesis, Universitat Autonoma de Barcelona-CVC	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Colorectal cancer is the fourth most common cause of cancer death worldwide and its survival rate depends on the stage in which it is detected on hence the necessity for an early colon screening. There are several screening techniques but colonoscopy is still nowadays the gold standard, although it has some drawbacks such as the miss rate. Our contribution, in the field of intelligent systems for colonoscopy, aims at providing a polyp localization and a polyp segmentation system based on a model of appearance for polyps. To develop both methods we define a model of appearance for polyps, which describes a polyp as enclosed by intensity valleys. The novelty of our contribution resides on the fact that we include in our model aspects of the image formation and we also consider the presence of other elements from the endoluminal scene such as specular highlights and blood vessels, which have an impact on the performance of our methods. In order to develop our polyp localization method we accumulate valley information in order to generate energy maps, which are also used to guide the polyp segmentation. Our methods achieve promising results in polyp localization and segmentation. As we want to explore the usability of our methods we present a comparative analysis between physicians fixations obtained via an eye tracking device and our polyp localization method. The results show that our method is indistinguishable to novice physicians although it is far from expert physicians.
	Address
	Corporate Author				Thesis	Ph.D. thesis
	Publisher	Ediciones Graficas Rey	Place of Publication		Editor	F. Javier Sanchez;Fernando Vilariño
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV			Approved	no
	Call Number	Admin @ si @ Ber2012			Serial	2211
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	Author	Pierluigi Casale; Oriol Pujol; Petia Radeva
	Title	Personalization and User Verification in Wearable Systems using Biometric Walking Patterns			Type	Journal Article
	Year	2012	Publication	Personal and Ubiquitous Computing	Abbreviated Journal	PUC
	Volume	16	Issue	5	Pages	563-580
	Keywords
	Abstract	In this article, a novel technique for user’s authentication and verification using gait as a biometric unobtrusive pattern is proposed. The method is based on a two stages pipeline. First, a general activity recognition classifier is personalized for an specific user using a small sample of her/his walking pattern. As a result, the system is much more selective with respect to the new walking pattern. A second stage verifies whether the user is an authorized one or not. This stage is defined as a one-class classification problem. In order to solve this problem, a four-layer architecture is built around the geometric concept of convex hull. This architecture allows to improve robustness to outliers, modeling non-convex shapes, and to take into account temporal coherence information. Two different scenarios are proposed as validation with two different wearable systems. First, a custom high-performance wearable system is built and used in a free environment. A second dataset is acquired from an Android-based commercial device in a ‘wild’ scenario with rough terrains, adversarial conditions, crowded places and obstacles. Results on both systems and datasets are very promising, reducing the verification error rates by an order of magnitude with respect to the state-of-the-art technologies.
	Address
	Corporate Author				Thesis
	Publisher	Springer-Verlag	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1617-4909	ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ CPR2012			Serial	1706
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	Author	Antonio Hernandez; Nadezhda Zlateva; Alexander Marinov; Miguel Reyes; Petia Radeva; Dimo Dimov; Sergio Escalera
	Title	Graph Cuts Optimization for Multi-Limb Human Segmentation in Depth Maps			Type	Conference Article
	Year	2012	Publication	25th IEEE Conference on Computer Vision and Pattern Recognition	Abbreviated Journal
	Volume		Issue		Pages	726-732
	Keywords
	Abstract	We present a generic framework for object segmentation using depth maps based on Random Forest and Graph-cuts theory, and apply it to the segmentation of human limbs in depth maps. First, from a set of random depth features, Random Forest is used to infer a set of label probabilities for each data sample. This vector of probabilities is used as unary term in α-β swap Graph-cuts algorithm. Moreover, depth of spatio-temporal neighboring data points are used as boundary potentials. Results on a new multi-label human depth data set show high performance in terms of segmentation overlapping of the novel methodology compared to classical approaches.
	Address	Portland; Oregon; June 2013
	Corporate Author				Thesis
	Publisher	IEEE Xplore	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1063-6919	ISBN	978-1-4673-1226-4	Medium
	Area		Expedition		Conference	CVPR
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ HZM2012b			Serial	2046
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	Author	Sergio Escalera; Josep Moya; Laura Igual; Veronica Violant; Maria Teresa Anguera
	Title	Automatic Human Behavior Analysis in ADHD			Type	Conference Article
	Year	2012	Publication	Eunethydis 2nd International ADHD Conference	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Poster
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	EUNETHYDIS
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ EMI2012a			Serial	2058
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	Author	Francesco Ciompi; Oriol Pujol; Carlo Gatta; Marina Alberti; Simone Balocco; Xavier Carrillo; J. Mauri; Petia Radeva
	Title	HoliMab: A Holistic Approach for Media-Adventitia Border Detection in Intravascular Ultrasound			Type	Journal Article
	Year	2012	Publication	Medical Image Analysis	Abbreviated Journal	MIA
	Volume	16	Issue	6	Pages	1085-1100
	Keywords	Media–Adventitia border detection; Intravascular ultrasound; Multi-Scale Stacked Sequential Learning; Error-correcting output codes; Holistic segmentation
	Abstract	We present a fully automatic methodology for the detection of the Media-Adventitia border (MAb) in human coronary artery in Intravascular Ultrasound (IVUS) images. A robust border detection is achieved by means of a holistic interpretation of the detection problem where the target object, i.e. the media layer, is considered as part of the whole vessel in the image and all the relationships between tissues are learnt. A fairly general framework exploiting multi-class tissue characterization as well as contextual information on the morphology and the appearance of the tissues is presented. The methodology is (i) validated through an exhaustive comparison with both Inter-observer variability on two challenging databases and (ii) compared with state-of-the-art methods for the detection of the MAb in IVUS. The obtained averaged values for the mean radial distance and the percentage of area difference are 0.211 mm and 10.1%, respectively. The applicability of the proposed methodology to clinical practice is also discussed.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ CPG2012			Serial	1995
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	Author	Marina Alberti; Simone Balocco; Carlo Gatta; Francesco Ciompi; Oriol Pujol; Joana Silva; Xavier Carrillo; Petia Radeva
	Title	Automatic Bifurcation Detection in Coronary IVUS Sequences			Type	Journal Article
	Year	2012	Publication	IEEE Transactions on Biomedical Engineering	Abbreviated Journal	TBME
	Volume	59	Issue	4	Pages	1022-2031
	Keywords
	Abstract	In this paper, we present a fully automatic method which identifies every bifurcation in an intravascular ultrasound (IVUS) sequence, the corresponding frames, the angular orientation with respect to the IVUS acquisition, and the extension. This goal is reached using a two-level classification scheme: first, a classifier is applied to a set of textural features extracted from each image of a sequence. A comparison among three state-of-the-art discriminative classifiers (AdaBoost, random forest, and support vector machine) is performed to identify the most suitable method for the branching detection task. Second, the results are improved by exploiting contextual information using a multiscale stacked sequential learning scheme. The results are then successively refined using a-priori information about branching dimensions and geometry. The proposed approach provides a robust tool for the quick review of pullback sequences, facilitating the evaluation of the lesion at bifurcation sites. The proposed method reaches an F-Measure score of 86.35%, while the F-Measure scores for inter- and intraobserver variability are 71.63% and 76.18%, respectively. The obtained results are positive. Especially, considering the branching detection task is very challenging, due to high variability in bifurcation dimensions and appearance.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0018-9294	ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ ABG2012			Serial	1996
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	Author	Antonio Hernandez; Nadezhda Zlateva; Alexander Marinov; Miguel Reyes; Petia Radeva; Dimo Dimov; Sergio Escalera
	Title	Human Limb Segmentation in Depth Maps based on Spatio-Temporal Graph Cuts Optimization			Type	Journal Article
	Year	2012	Publication	Journal of Ambient Intelligence and Smart Environments	Abbreviated Journal	JAISE
	Volume	4	Issue	6	Pages	535-546
	Keywords	Multi-modal vision processing; Random Forest; Graph-cuts; multi-label segmentation; human body segmentation
	Abstract	We present a framework for object segmentation using depth maps based on Random Forest and Graph-cuts theory, and apply it to the segmentation of human limbs. First, from a set of random depth features, Random Forest is used to infer a set of label probabilities for each data sample. This vector of probabilities is used as unary term in α−β swap Graph-cuts algorithm. Moreover, depth values of spatio-temporal neighboring data points are used as boundary potentials. Results on a new multi-label human depth data set show high performance in terms of segmentation overlapping of the novel methodology compared to classical approaches.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1876-1364	ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ HZM2012a			Serial	2006
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	Author	Laura Igual; Joan Carles Soliva; Antonio Hernandez; Sergio Escalera; Oscar Vilarroya; Petia Radeva
	Title	Supervised Brain Segmentation and Classification in Diagnostic of Attention-Deficit/Hyperactivity Disorder			Type	Conference Article
	Year	2012	Publication	High Performance Computing and Simulation, International Conference on	Abbreviated Journal
	Volume		Issue		Pages	182-187
	Keywords
	Abstract	This paper presents an automatic method for external and internal segmentation of the caudate nucleus in Magnetic Resonance Images (MRI) based on statistical and structural machine learning approaches. This method is applied in Attention-Deficit/Hyperactivity Disorder (ADHD) diagnosis. The external segmentation method adapts the Graph Cut energy-minimization model to make it suitable for segmenting small, low-contrast structures, such as the caudate nucleus. In particular, new energy function data and boundary potentials are defined and a supervised energy term based on contextual brain structures is added. Furthermore, the internal segmentation method learns a classifier based on shape features of the Region of Interest (ROI) in MRI slices. The results show accurate external and internal caudate segmentation in a real data set and similar performance of ADHD diagnostic test to manual annotation.
	Address	Madrid
	Corporate Author				Thesis
	Publisher	IEEE Xplore	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-1-4673-2359-8	Medium
	Area		Expedition		Conference	HPCS
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ ISH2012a			Serial	2038
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	Author	Xavier Perez Sala; Laura Igual; Sergio Escalera; Cecilio Angulo
	Title	Uniform Sampling of Rotations for Discrete and Continuous Learning of 2D Shape Models			Type	Book Chapter
	Year	2012	Publication	Vision Robotics: Technologies for Machine Learning and Vision Applications	Abbreviated Journal
	Volume		Issue	2	Pages	23-42
	Keywords
	Abstract	Different methodologies of uniform sampling over the rotation group, SO(3), for building unbiased 2D shape models from 3D objects are introduced and reviewed in this chapter. State-of-the-art non uniform sampling approaches are discussed, and uniform sampling methods using Euler angles and quaternions are introduced. Moreover, since presented work is oriented to model building applications, it is not limited to general discrete methods to obtain uniform 3D rotations, but also from a continuous point of view in the case of Procrustes Analysis.
	Address
	Corporate Author				Thesis
	Publisher	IGI-Global	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ PIE2012			Serial	2064
Permanent link to this record