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	Author	Carlo Gatta; Francesco Ciompi
	Title	Stacked Sequential Scale-Space Taylor Context			Type	Journal Article
	Year	2014	Publication	IEEE Transactions on Pattern Analysis and Machine Intelligence	Abbreviated Journal	TPAMI
	Volume	36	Issue	8	Pages	1694-1700
	Keywords
	Abstract	We analyze sequential image labeling methods that sample the posterior label field in order to gather contextual information. We propose an effective method that extracts local Taylor coefficients from the posterior at different scales. Results show that our proposal outperforms state-of-the-art methods on MSRC-21, CAMVID, eTRIMS8 and KAIST2 data sets.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0162-8828	ISBN		Medium
	Area		Expedition		Conference
	Notes	LAMP; MILAB; 601.160; 600.079			Approved	no
	Call Number	Admin @ si @ GaC2014			Serial	2466
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	Author	Carlo Gatta; Adriana Romero; Joost Van de Weijer
	Title	Unrolling loopy top-down semantic feedback in convolutional deep networks			Type	Conference Article
	Year	2014	Publication	Workshop on Deep Vision: Deep Learning for Computer Vision	Abbreviated Journal
	Volume		Issue		Pages	498-505
	Keywords
	Abstract	In this paper, we propose a novel way to perform top-down semantic feedback in convolutional deep networks for efficient and accurate image parsing. We also show how to add global appearance/semantic features, which have shown to improve image parsing performance in state-of-the-art methods, and was not present in previous convolutional approaches. The proposed method is characterised by an efficient training and a sufficiently fast testing. We use the well known SIFTflow dataset to numerically show the advantages provided by our contributions, and to compare with state-of-the-art image parsing convolutional based approaches.
	Address	Columbus; Ohio; June 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CVPRW
	Notes	LAMP; MILAB; 601.160; 600.079			Approved	no
	Call Number	Admin @ si @ GRW2014			Serial	2490
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	Author	Michal Drozdzal
	Title	Sequential image analysis for computer-aided wireless endoscopy			Type	Book Whole
	Year	2014	Publication	PhD Thesis, Universitat de Barcelona-CVC	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Wireless Capsule Endoscopy (WCE) is a technique for inner-visualization of the entire small intestine and, thus, offers an interesting perspective on intestinal motility. The two major drawbacks of this technique are: 1) huge amount of data acquired by WCE makes the motility analysis tedious and 2) since the capsule is the first tool that offers complete inner-visualization of the small intestine,the exact importance of the observed events is still an open issue. Therefore, in this thesis, a novel computer-aided system for intestinal motility analysis is presented. The goal of the system is to provide an easily-comprehensible visual description of motility-related intestinal events to a physician. In order to do so, several tools based either on computer vision concepts or on machine learning techniques are presented. A method for transforming 3D video signal to a holistic image of intestinal motility, called motility bar, is proposed. The method calculates the optimal mapping from video into image from the intestinal motility point of view. To characterize intestinal motility, methods for automatic extraction of motility information from WCE are presented. Two of them are based on the motility bar and two of them are based on frame-per-frame analysis. In particular, four algorithms dealing with the problems of intestinal contraction detection, lumen size estimation, intestinal content characterization and wrinkle frame detection are proposed and validated. The results of the algorithms are converted into sequential features using an online statistical test. This test is designed to work with multivariate data streams. To this end, we propose a novel formulation of concentration inequality that is introduced into a robust adaptive windowing algorithm for multivariate data streams. The algorithm is used to obtain robust representation of segments with constant intestinal motility activity. The obtained sequential features are shown to be discriminative in the problem of abnormal motility characterization. Finally, we tackle the problem of efficient labeling. To this end, we incorporate active learning concepts to the problems present in WCE data and propose two approaches. The first one is based the concepts of sequential learning and the second one adapts the partition-based active learning to an error-free labeling scheme. All these steps are sufficient to provide an extensive visual description of intestinal motility that can be used by an expert as decision support system.
	Address
	Corporate Author				Thesis	Ph.D. thesis
	Publisher	Ediciones Graficas Rey	Place of Publication		Editor	Petia Radeva
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-84-940902-3-3	Medium
	Area		Expedition		Conference
	Notes	MILAB			Approved	no
	Call Number	Admin @ si @ Dro2014			Serial	2486
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	Author	Marc Bolaños; Maite Garolera; Petia Radeva
	Title	Video Segmentation of Life-Logging Videos			Type	Conference Article
	Year	2014	Publication	8th Conference on Articulated Motion and Deformable Objects	Abbreviated Journal
	Volume	8563	Issue		Pages	1-9
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	AMDO
	Notes	MILAB			Approved	no
	Call Number	Admin @ si @ BGR2014			Serial	2558
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	Author	Maedeh Aghaei; Petia Radeva
	Title	Bag-of-Tracklets for Person Tracking in Life-Logging Data			Type	Conference Article
	Year	2014	Publication	17th International Conference of the Catalan Association for Artificial Intelligence	Abbreviated Journal
	Volume	269	Issue		Pages	35-44
	Keywords
	Abstract	By increasing popularity of wearable cameras, life-logging data analysis is becoming more and more important and useful to derive significant events out of this substantial collection of images. In this study, we introduce a new tracking method applied to visual life-logging, called bag-of-tracklets, which is based on detecting, localizing and tracking of people. Given the low spatial and temporal resolution of the image data, our model generates and groups tracklets in a unsupervised framework and extracts image sequences of person appearance according to a similarity score of the bag-of-tracklets. The model output is a meaningful sequence of events expressing human appearance and tracking them in life-logging data. The achieved results prove the robustness of our model in terms of efficiency and accuracy despite the low spatial and temporal resolution of the data.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-1-61499-451-0	Medium
	Area		Expedition		Conference	CCIA
	Notes	MILAB			Approved	no
	Call Number	Admin @ si @ AgR2015			Serial	2607
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	Author	Pierluigi Casale; Oriol Pujol; Petia Radeva
	Title	Approximate polytope ensemble for one-class classification			Type	Journal Article
	Year	2014	Publication	Pattern Recognition	Abbreviated Journal	PR
	Volume	47	Issue	2	Pages	854-864
	Keywords	One-class classification; Convex hull; High-dimensionality; Random projections; Ensemble learning
	Abstract	In this work, a new one-class classification ensemble strategy called approximate polytope ensemble is presented. The main contribution of the paper is threefold. First, the geometrical concept of convex hull is used to define the boundary of the target class defining the problem. Expansions and contractions of this geometrical structure are introduced in order to avoid over-fitting. Second, the decision whether a point belongs to the convex hull model in high dimensional spaces is approximated by means of random projections and an ensemble decision process. Finally, a tiling strategy is proposed in order to model non-convex structures. Experimental results show that the proposed strategy is significantly better than state of the art one-class classification methods on over 200 datasets.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB; 605.203			Approved	no
	Call Number	Admin @ si @ CPR2014a			Serial	2469
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	Author	Simeon Petkov; Xavier Carrillo; Petia Radeva; Carlo Gatta
	Title	Diaphragm border detection in coronary X-ray angiographies: New method and applications			Type	Journal Article
	Year	2014	Publication	Computerized Medical Imaging and Graphics	Abbreviated Journal	CMIG
	Volume	38	Issue	4	Pages	296-305
	Keywords
	Abstract	X-ray angiography is widely used in cardiac disease diagnosis during or prior to intravascular interventions. The diaphragm motion and the heart beating induce gray-level changes, which are one of the main obstacles in quantitative analysis of myocardial perfusion. In this paper we focus on detecting the diaphragm border in both single images or whole X-ray angiography sequences. We show that the proposed method outperforms state of the art approaches. We extend a previous publicly available data set, adding new ground truth data. We also compose another set of more challenging images, thus having two separate data sets of increasing difficulty. Finally, we show three applications of our method: (1) a strategy to reduce false positives in vessel enhanced images; (2) a digital diaphragm removal algorithm; (3) an improvement in Myocardial Blush Grade semi-automatic estimation.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB; LAMP; 600.079			Approved	no
	Call Number	Admin @ si @ PCR2014			Serial	2468
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	Author	Adriana Romero; Petia Radeva; Carlo Gatta
	Title	No more meta-parameter tuning in unsupervised sparse feature learning			Type	Miscellaneous
	Year	2014	Publication	Arxiv	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	CoRR abs/1402.5766 We propose a meta-parameter free, off-the-shelf, simple and fast unsupervised feature learning algorithm, which exploits a new way of optimizing for sparsity. Experiments on STL-10 show that the method presents state-of-the-art performance and provides discriminative features that generalize well.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB; LAMP; 600.079			Approved	no
	Call Number	Admin @ si @ RRG2014			Serial	2471
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	Author	Adriana Romero; Carlo Gatta; Gustavo Camps-Valls
	Title	Unsupervised Deep Feature Extraction Of Hyperspectral Images			Type	Conference Article
	Year	2014	Publication	6th Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Convolutional networks; deep learning; sparse learning; feature extraction; hyperspectral image classification
	Abstract	This paper presents an effective unsupervised sparse feature learning algorithm to train deep convolutional networks on hyperspectral images. Deep convolutional hierarchical representations are learned and then used for pixel classification. Features in lower layers present less abstract representations of data, while higher layers represent more abstract and complex characteristics. We successfully illustrate the performance of the extracted representations in a challenging AVIRIS hyperspectral image classification problem, compared to standard dimensionality reduction methods like principal component analysis (PCA) and its kernel counterpart (kPCA). The proposed method largely outperforms the previous state-ofthe-art results on the same experimental setting. Results show that single layer networks can extract powerful discriminative features only when the receptive field accounts for neighboring pixels. Regarding the deep architecture, we can conclude that: (1) additional layers in a deep architecture significantly improve the performance w.r.t. single layer variants; (2) the max-pooling step in each layer is mandatory to achieve satisfactory results; and (3) the performance gain w.r.t. the number of layers is upper bounded, since the spatial resolution is reduced at each pooling, resulting in too spatially coarse output features.
	Address	Lausanne; Switzerland; June 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	WHISPERS
	Notes	MILAB; LAMP; 600.079			Approved	no
	Call Number	Admin @ si @ RGC2014			Serial	2513
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	Author	Simone Balocco; Carlo Gatta; Francesco Ciompi; A. Wahle; Petia Radeva; S. Carlier; G. Unal; E. Sanidas; J. Mauri; X. Carillo; T. Kovarnik; C. Wang; H. Chen; T. P. Exarchos; D. I. Fotiadis; F. Destrempes; G. Cloutier; Oriol Pujol; Marina Alberti; E. G. Mendizabal-Ruiz; M. Rivera; T. Aksoy; R. W. Downe; I. A. Kakadiaris
	Title	Standardized evaluation methodology and reference database for evaluating IVUS image segmentation			Type	Journal Article
	Year	2014	Publication	Computerized Medical Imaging and Graphics	Abbreviated Journal	CMIG
	Volume	38	Issue	2	Pages	70-90
	Keywords	IVUS (intravascular ultrasound); Evaluation framework; Algorithm comparison; Image segmentation
	Abstract	This paper describes an evaluation framework that allows a standardized and quantitative comparison of IVUS lumen and media segmentation algorithms. This framework has been introduced at the MICCAI 2011 Computing and Visualization for (Intra)Vascular Imaging (CVII) workshop, comparing the results of eight teams that participated. We describe the available data-base comprising of multi-center, multi-vendor and multi-frequency IVUS datasets, their acquisition, the creation of the reference standard and the evaluation measures. The approaches address segmentation of the lumen, the media, or both borders; semi- or fully-automatic operation; and 2-D vs. 3-D methodology. Three performance measures for quantitative analysis have been proposed. The results of the evaluation indicate that segmentation of the vessel lumen and media is possible with an accuracy that is comparable to manual annotation when semi-automatic methods are used, as well as encouraging results can be obtained also in case of fully-automatic segmentation. The analysis performed in this paper also highlights the challenges in IVUS segmentation that remains to be solved.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB; LAMP; HuPBA; 600.046; 600.063; 600.079			Approved	no
	Call Number	Admin @ si @ BGC2013			Serial	2314
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	Author	Oualid M. Benkarim; Petia Radeva; Laura Igual
	Title	Label Consistent Multiclass Discriminative Dictionary Learning for MRI Segmentation			Type	Conference Article
	Year	2014	Publication	8th Conference on Articulated Motion and Deformable Objects	Abbreviated Journal
	Volume	8563	Issue		Pages	138-147
	Keywords	MRI segmentation; sparse representation; discriminative dic- tionary learning; multiclass classication
	Abstract	The automatic segmentation of multiple subcortical structures in brain Magnetic Resonance Images (MRI) still remains a challenging task. In this paper, we address this problem using sparse representation and discriminative dictionary learning, which have shown promising results in compression, image denoising and recently in MRI segmentation. Particularly, we use multiclass dictionaries learned from a set of brain atlases to simultaneously segment multiple subcortical structures. We also impose dictionary atoms to be specialized in one given class using label consistent K-SVD, which can alleviate the bias produced by unbalanced libraries, present when dealing with small structures. The proposed method is compared with other state of the art approaches for the segmentation of the Basal Ganglia of 35 subjects of a public dataset. The promising results of the segmentation method show the eciency of the multiclass discriminative dictionary learning algorithms in MRI segmentation problems.
	Address	Palma de Mallorca; July 2014
	Corporate Author				Thesis
	Publisher	Springer International Publishing	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-319-08848-8	Medium
	Area		Expedition		Conference	AMDO
	Notes	MILAB; OR			Approved	no
	Call Number	Admin @ si @ BRI2014			Serial	2494
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	Author	Michal Drozdzal; Jordi Vitria; Santiago Segui; Carolina Malagelada; Fernando Azpiroz; Petia Radeva
	Title	Intestinal event segmentation for endoluminal video analysis			Type	Conference Article
	Year	2014	Publication	21st IEEE International Conference on Image Processing	Abbreviated Journal
	Volume		Issue		Pages	3592 - 3596
	Keywords
	Abstract
	Address	Paris; Francia; October 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICIP
	Notes	MILAB; OR;MV			Approved	no
	Call Number	Admin @ si @ DVS2014			Serial	2565
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	Author	Jorge Bernal
	Title	Polyp Localization and Segmentation in Colonoscopy Images by Means of a Model of Appearance for Polyps			Type	Journal Article
	Year	2014	Publication	Electronic Letters on Computer Vision and Image Analysis	Abbreviated Journal	ELCVIA
	Volume	13	Issue	2	Pages	9-10
	Keywords	Colonoscopy; polyp localization; polyp segmentation; Eye-tracking
	Abstract	Colorectal cancer is the fourth most common cause of cancer death worldwide and its survival rate depends on the stage in which it is detected on hence the necessity for an early colon screening. There are several screening techniques but colonoscopy is still nowadays the gold standard, although it has some drawbacks such as the miss rate. Our contribution, in the field of intelligent systems for colonoscopy, aims at providing a polyp localization and a polyp segmentation system based on a model of appearance for polyps. To develop both methods we define a model of appearance for polyps, which describes a polyp as enclosed by intensity valleys. The novelty of our contribution resides on the fact that we include in our model aspects of the image formation and we also consider the presence of other elements from the endoluminal scene such as specular highlights and blood vessels, which have an impact on the performance of our methods. In order to develop our polyp localization method we accumulate valley information in order to generate energy maps, which are also used to guide the polyp segmentation. Our methods achieve promising results in polyp localization and segmentation. As we want to explore the usability of our methods we present a comparative analysis between physicians fixations obtained via an eye tracking device and our polyp localization method. The results show that our method is indistinguishable to novice physicians although it is far from expert physicians.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor	Alicia Fornes; Volkmar Frinken
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MV			Approved	no
	Call Number	Admin @ si @ Ber2014			Serial	2487
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	Author	Jorge Bernal; Fernando Vilariño; F. Javier Sanchez; M. Arnold; Anarta Ghosh; Gerard Lacey
	Title	Experts vs Novices: Applying Eye-tracking Methodologies in Colonoscopy Video Screening for Polyp Search			Type	Conference Article
	Year	2014	Publication	2014 Symposium on Eye Tracking Research and Applications	Abbreviated Journal
	Volume		Issue		Pages	223-226
	Keywords
	Abstract	We present in this paper a novel study aiming at identifying the differences in visual search patterns between physicians of diverse levels of expertise during the screening of colonoscopy videos. Physicians were clustered into two groups -experts and novices- according to the number of procedures performed, and fixations were captured by an eye-tracker device during the task of polyp search in different video sequences. These fixations were integrated into heat maps, one for each cluster. The obtained maps were validated over a ground truth consisting of a mask of the polyp, and the comparison between experts and novices was performed by using metrics such as reaction time, dwelling time and energy concentration ratio. Experimental results show a statistically significant difference between experts and novices, and the obtained maps show to be a useful tool for the characterisation of the behaviour of each group.
	Address	USA; March 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-1-4503-2751-0	Medium
	Area		Expedition		Conference	ETRA
	Notes	MV; 600.047; 600.060;SIAI			Approved	no
	Call Number	Admin @ si @ BVS2014			Serial	2448
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	Author	Jorge Bernal; Joan M. Nuñez; F. Javier Sanchez; Fernando Vilariño
	Title	Polyp Segmentation Method in Colonoscopy Videos by means of MSA-DOVA Energy Maps Calculation			Type	Conference Article
	Year	2014	Publication	3rd MICCAI Workshop on Clinical Image-based Procedures: Translational Research in Medical Imaging	Abbreviated Journal
	Volume	8680	Issue		Pages	41-49
	Keywords	Image segmentation; Polyps; Colonoscopy; Valley information; Energy maps
	Abstract	In this paper we present a novel polyp region segmentation method for colonoscopy videos. Our method uses valley information associated to polyp boundaries in order to provide an initial segmentation. This first segmentation is refined to eliminate boundary discontinuities caused by image artifacts or other elements of the scene. Experimental results over a publicly annotated database show that our method outperforms both general and specific segmentation methods by providing more accurate regions rich in polyp content. We also prove how image preprocessing is needed to improve final polyp region segmentation.
	Address	Boston; USA; September 2014
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CLIP
	Notes	MV; 600.060; 600.044; 600.047;SIAI			Approved	no
	Call Number	Admin @ si @ BNS2014			Serial	2502
Permanent link to this record