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Author Frederic Sampedro; Sergio Escalera; Anna Domenech; Ignasi Carrio edit  doi
openurl 
  Title A computational framework for cancer response assessment based on oncological PET-CT scans Type Journal Article
  Year 2014 Publication Computers in Biology and Medicine Abbreviated Journal CBM  
  Volume 55 Issue Pages 92–99  
  Keywords Computer aided diagnosis; Nuclear medicine; Machine learning; Image processing; Quantitative analysis  
  Abstract In this work we present a comprehensive computational framework to help in the clinical assessment of cancer response from a pair of time consecutive oncological PET-CT scans. In this scenario, the design and implementation of a supervised machine learning system to predict and quantify cancer progression or response conditions by introducing a novel feature set that models the underlying clinical context is described. Performance results in 100 clinical cases (corresponding to 200 whole body PET-CT scans) in comparing expert-based visual analysis and classifier decision making show up to 70% accuracy within a completely automatic pipeline and 90% accuracy when providing the system with expert-guided PET tumor segmentation masks.  
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  Notes HuPBA;MILAB Approved no  
  Call Number Admin @ si @ SED2014 Serial 2606  
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Author Enric Marti; J.Roncaries; Debora Gil; Aura Hernandez-Sabate; Antoni Gurgui; Ferran Poveda edit  doi
openurl 
  Title PBL On Line: A proposal for the organization, part-time monitoring and assessment of PBL group activities Type Journal
  Year 2015 Publication Journal of Technology and Science Education Abbreviated Journal JOTSE  
  Volume 5 Issue 2 Pages 87-96  
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  Notes IAM; ADAS; 600.076; 600.075 Approved no  
  Call Number Admin @ si @ MRG2015 Serial 2608  
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Author Jorge Bernal; F. Javier Sanchez; Gloria Fernandez Esparrach; Debora Gil; Cristina Rodriguez de Miguel; Fernando Vilariño edit   pdf
doi  openurl
  Title WM-DOVA Maps for Accurate Polyp Highlighting in Colonoscopy: Validation vs. Saliency Maps from Physicians Type Journal Article
  Year 2015 Publication Computerized Medical Imaging and Graphics Abbreviated Journal CMIG  
  Volume 43 Issue Pages 99-111  
  Keywords Polyp localization; Energy Maps; Colonoscopy; Saliency; Valley detection  
  Abstract We introduce in this paper a novel polyp localization method for colonoscopy videos. Our method is based on a model of appearance for polyps which defines polyp boundaries in terms of valley information. We propose the integration of valley information in a robust way fostering complete, concave and continuous boundaries typically associated to polyps. This integration is done by using a window of radial sectors which accumulate valley information to create WMDOVA1 energy maps related with the likelihood of polyp presence. We perform a double validation of our maps, which include the introduction of two new databases, including the first, up to our knowledge, fully annotated database with clinical metadata associated. First we assess that the highest value corresponds with the location of the polyp in the image. Second, we show that WM-DOVA energy maps can be comparable with saliency maps obtained from physicians' fixations obtained via an eye-tracker. Finally, we prove that our method outperforms state-of-the-art computational saliency results. Our method shows good performance, particularly for small polyps which are reported to be the main sources of polyp miss-rate, which indicates the potential applicability of our method in clinical practice.  
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  ISSN 0895-6111 ISBN Medium  
  Area Expedition Conference (up)  
  Notes MV; IAM; 600.047; 600.060; 600.075;SIAI Approved no  
  Call Number Admin @ si @ BSF2015 Serial 2609  
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Author Carles Sanchez; Oriol Ramos Terrades; Patricia Marquez; Enric Marti; J.Roncaries; Debora Gil edit  doi
openurl 
  Title Automatic evaluation of practices in Moodle for Self Learning in Engineering Type Journal
  Year 2015 Publication Journal of Technology and Science Education Abbreviated Journal JOTSE  
  Volume 5 Issue 2 Pages 97-106  
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  Notes IAM; DAG; 600.075; 600.077 Approved no  
  Call Number Admin @ si @ SRM2015 Serial 2610  
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Author Carles Sanchez; Jorge Bernal; F. Javier Sanchez; Antoni Rosell; Marta Diez-Ferrer; Debora Gil edit   pdf
doi  openurl
  Title Towards On-line Quantification of Tracheal Stenosis from Videobronchoscopy Type Journal Article
  Year 2015 Publication International Journal of Computer Assisted Radiology and Surgery Abbreviated Journal IJCAR  
  Volume 10 Issue 6 Pages 935-945  
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  Notes IAM; MV; 600.075 Approved no  
  Call Number Admin @ si @ SBS2015a Serial 2611  
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Author R. Clariso; David Masip; A. Rius edit  url
openurl 
  Title Student projects empowering mobile learning in higher education Type Journal
  Year 2014 Publication Revista de Universidad y Sociedad del Conocimiento Abbreviated Journal RUSC  
  Volume 11 Issue Pages 192-207  
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  Series Volume Series Issue Edition  
  ISSN 1698-580X ISBN Medium  
  Area Expedition Conference (up)  
  Notes OR;MV Approved no  
  Call Number Admin @ si @ CMR2014 Serial 2619  
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Author Mariella Dimiccoli edit   pdf
doi  openurl
  Title Figure-ground segregation: A fully nonlocal approach Type Journal Article
  Year 2016 Publication Vision Research Abbreviated Journal VR  
  Volume 126 Issue Pages 308-317  
  Keywords Figure-ground segregation; Nonlocal approach; Directional linear voting; Nonlinear diffusion  
  Abstract We present a computational model that computes and integrates in a nonlocal fashion several configural cues for automatic figure-ground segregation. Our working hypothesis is that the figural status of each pixel is a nonlocal function of several geometric shape properties and it can be estimated without explicitly relying on object boundaries. The methodology is grounded on two elements: multi-directional linear voting and nonlinear diffusion. A first estimation of the figural status of each pixel is obtained as a result of a voting process, in which several differently oriented line-shaped neighborhoods vote to express their belief about the figural status of the pixel. A nonlinear diffusion process is then applied to enforce the coherence of figural status estimates among perceptually homogeneous regions. Computer simulations fit human perception and match the experimental evidence that several cues cooperate in defining figure-ground segregation. The results of this work suggest that figure-ground segregation involves feedback from cells with larger receptive fields in higher visual cortical areas.  
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  Notes MILAB; Approved no  
  Call Number Admin @ si @ Dim2016b Serial 2623  
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Author Jorge Bernal; F. Javier Sanchez; Cristina Rodriguez de Miguel; Gloria Fernandez Esparrach edit  url
isbn  openurl
  Title Bulding up the future of colonoscopy: A synergy between clinicians and computer scientists Type Book Chapter
  Year 2015 Publication Colonoscopy and Colorectal Cancer Abbreviated Journal  
  Volume Issue Pages  
  Keywords Intelligent systems; Image properties; Validation; Clinical drawbacks; Endoluminal scene description  
  Abstract Recent advances in endoscopic technology have generated an increasing interest in strengthening the collaboration between clinicians and computers scientist to develop intelligent systems that can provide additional information to clinicians in the different stages of an intervention. The objective of this chapter is to identify clinical drawbacks of colonoscopy in order to define potential areas of collaboration. Once areas are defined, we present the challenges that colonoscopy images present in order computational methods to provide with meaningful output, including those related to image formation and acquisition, as they are proven to have an impact in the performance of an intelligent system. Finally, we also propose how to define validation frameworks in order to assess the performance of a given method, making an special emphasis on how databases should be created and annotated and which metrics should be used to evaluate systems correctly.  
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  Series Volume Series Issue Edition  
  ISSN ISBN 978-953-51-2225-8 Medium  
  Area Expedition Conference (up)  
  Notes MV Approved no  
  Call Number Admin @ si @ BSR2015 Serial 2624  
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Author Marco Pedersoli; Andrea Vedaldi; Jordi Gonzalez; Xavier Roca edit   pdf
doi  openurl
  Title A coarse-to-fine approach for fast deformable object detection Type Journal Article
  Year 2015 Publication Pattern Recognition Abbreviated Journal PR  
  Volume 48 Issue 5 Pages 1844-1853  
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  Abstract We present a method that can dramatically accelerate object detection with part based models. The method is based on the observation that the cost of detection is likely to be dominated by the cost of matching each part to the image, and not by the cost of computing the optimal configuration of the parts as commonly assumed. Therefore accelerating detection requires minimizing the number of
part-to-image comparisons. To this end we propose a multiple-resolutions hierarchical part based model and a corresponding coarse-to-fine inference procedure that recursively eliminates from the search space unpromising part
placements. The method yields a ten-fold speedup over the standard dynamic programming approach and is complementary to the cascade-of-parts approach of [9]. Compared to the latter, our method does not have parameters to be determined empirically, which simplifies its use during the training of the model. Most importantly, the two techniques can be combined to obtain a very significant speedup, of two orders of magnitude in some cases. We evaluate our method extensively on the PASCAL VOC and INRIA datasets, demonstrating a very high increase in the detection speed with little degradation of the accuracy.
 
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  Notes ISE; 600.078; 602.005; 605.001; 302.012 Approved no  
  Call Number Admin @ si @ PVG2015 Serial 2628  
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Author Jiaolong Xu edit  isbn
openurl 
  Title Domain Adaptation of Deformable Part-based Models Type Book Whole
  Year 2015 Publication PhD Thesis, Universitat Autonoma de Barcelona-CVC Abbreviated Journal  
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  Abstract On-board pedestrian detection is crucial for Advanced Driver Assistance Systems
(ADAS). An accurate classi cation is fundamental for vision-based pedestrian detection.
The underlying assumption for learning classi ers is that the training set and the deployment environment (testing) follow the same probability distribution regarding the features used by the classi ers. However, in practice, there are di erent reasons that can break this constancy assumption. Accordingly, reusing existing classi ers by adapting them from the previous training environment (source domain) to the new testing one (target domain) is an approach with increasing acceptance in the computer vision community. In this thesis we focus on the domain adaptation of deformable part-based models (DPMs) for pedestrian detection. As a prof of concept, we use a computer graphic based synthetic dataset, i.e. a virtual world, as the source domain, and adapt the virtual-world trained DPM detector to various real-world dataset.
We start by exploiting the maximum detection accuracy of the virtual-world
trained DPM. Even though, when operating in various real-world datasets, the virtualworld trained detector still su er from accuracy degradation due to the domain gap of virtual and real worlds. We then focus on domain adaptation of DPM. At the rst step, we consider single source and single target domain adaptation and propose two batch learning methods, namely A-SSVM and SA-SSVM. Later, we further consider leveraging multiple target (sub-)domains for progressive domain adaptation and propose a hierarchical adaptive structured SVM (HA-SSVM) for optimization. Finally, we extend HA-SSVM for the challenging online domain adaptation problem, aiming at making the detector to automatically adapt to the target domain online, without any human intervention. All of the proposed methods in this thesis do not require
revisiting source domain data. The evaluations are done on the Caltech pedestrian detection benchmark. Results show that SA-SSVM slightly outperforms A-SSVM and avoids accuracy drops as high as 15 points when comparing with a non-adapted detector. The hierarchical model learned by HA-SSVM further boosts the domain adaptation performance. Finally, the online domain adaptation method has demonstrated that it can achieve comparable accuracy to the batch learned models while not requiring manually label target domain examples. Domain adaptation for pedestrian detection is of paramount importance and a relatively unexplored area. We humbly hope the work in this thesis could provide foundations for future work in this area.
 
  Address April 2015  
  Corporate Author Thesis Ph.D. thesis  
  Publisher Place of Publication Editor Antonio Lopez  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN 978-84-943427-1-4 Medium  
  Area Expedition Conference (up)  
  Notes ADAS; 600.076 Approved no  
  Call Number Admin @ si @ Xu2015 Serial 2631  
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Author Michal Drozdzal; Santiago Segui; Petia Radeva; Carolina Malagelada; Fernando Azpiroz; Jordi Vitria edit  doi
openurl 
  Title Motility bar: a new tool for motility analysis of endoluminal videos Type Journal Article
  Year 2015 Publication Computers in Biology and Medicine Abbreviated Journal CBM  
  Volume 65 Issue Pages 320-330  
  Keywords Small intestine; Motility; WCE; Computer vision; Image classification  
  Abstract Wireless Capsule Endoscopy (WCE) provides a new perspective of the small intestine, since it enables, for the first time, visualization of the entire organ. However, the long visual video analysis time, due to the large number of data in a single WCE study, was an important factor impeding the widespread use of the capsule as a tool for intestinal abnormalities detection. Therefore, the introduction of WCE triggered a new field for the application of computational methods, and in particular, of computer vision. In this paper, we follow the computational approach and come up with a new perspective on the small intestine motility problem. Our approach consists of three steps: first, we review a tool for the visualization of the motility information contained in WCE video; second, we propose algorithms for the characterization of two motility building-blocks: contraction detector and lumen size estimation; finally, we introduce an approach to detect segments of stable motility behavior. Our claims are supported by an evaluation performed with 10 WCE videos, suggesting that our methods ably capture the intestinal motility information.  
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  Notes MILAB;MV Approved no  
  Call Number Admin @ si @ DSR2015 Serial 2635  
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Author Tadashi Araki; Nobutaka Ikeda; Nilanjan Dey; Sayan Chakraborty; Luca Saba; Dinesh Kumar; Elisa Cuadrado Godia; Xiaoyi Jiang; Ajay Gupta; Petia Radeva; John R. Laird; Andrew Nicolaides; Jasjit S. Suri edit  doi
openurl 
  Title A comparative approach of four different image registration techniques for quantitative assessment of coronary artery calcium lesions using intravascular ultrasound Type Journal Article
  Year 2015 Publication Computer Methods and Programs in Biomedicine Abbreviated Journal CMPB  
  Volume 118 Issue 2 Pages 158-172  
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  Notes MILAB Approved no  
  Call Number Admin @ si @ AID2015 Serial 2640  
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Author Andres Traumann; Gholamreza Anbarjafari; Sergio Escalera edit  doi
openurl 
  Title Accurate 3D Measurement Using Optical Depth Information Type Journal Article
  Year 2015 Publication Electronic Letters Abbreviated Journal EL  
  Volume 51 Issue 18 Pages 1420-1422  
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  Abstract A novel three-dimensional measurement technique is proposed. The methodology consists in mapping from the screen coordinates reported by the optical camera to the real world, and integrating distance gradients from the beginning to the end point, while also minimising the error through fitting pixel locations to a smooth curve. The results demonstrate accuracy of less than half a centimetre using Microsoft Kinect II.  
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  Notes HuPBA;MILAB Approved no  
  Call Number Admin @ si @ TAE2015 Serial 2647  
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Author Mohammad Rouhani; Angel Sappa edit   pdf
doi  openurl
  Title The Richer Representation the Better Registration Type Journal Article
  Year 2013 Publication IEEE Transactions on Image Processing Abbreviated Journal TIP  
  Volume 22 Issue 12 Pages 5036-5049  
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  Abstract In this paper, the registration problem is formulated as a point to model distance minimization. Unlike most of the existing works, which are based on minimizing a point-wise correspondence term, this formulation avoids the correspondence search that is time-consuming. In the first stage, the target set is described through an implicit function by employing a linear least squares fitting. This function can be either an implicit polynomial or an implicit B-spline from a coarse to fine representation. In the second stage, we show how the obtained implicit representation is used as an interface to convert point-to-point registration into point-to-implicit problem. Furthermore, we show that this registration distance is smooth and can be minimized through the Levengberg-Marquardt algorithm. All the formulations presented for both stages are compact and easy to implement. In addition, we show that our registration method can be handled using any implicit representation though some are coarse and others provide finer representations; hence, a tradeoff between speed and accuracy can be set by employing the right implicit function. Experimental results and comparisons in 2D and 3D show the robustness and the speed of convergence of the proposed approach.  
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  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1057-7149 ISBN Medium  
  Area Expedition Conference (up)  
  Notes ADAS Approved no  
  Call Number Admin @ si @ RoS2013 Serial 2665  
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Author Carolina Malagelada; Michal Drozdzal; Santiago Segui; Sara Mendez; Jordi Vitria; Petia Radeva; Javier Santos; Anna Accarino; Juan R. Malagelada; Fernando Azpiroz edit  doi
openurl 
  Title Classification of functional bowel disorders by objective physiological criteria based on endoluminal image analysis Type Journal Article
  Year 2015 Publication American Journal of Physiology-Gastrointestinal and Liver Physiology Abbreviated Journal AJPGI  
  Volume 309 Issue 6 Pages G413--G419  
  Keywords capsule endoscopy; computer vision analysis; functional bowel disorders; intestinal motility; machine learning  
  Abstract We have previously developed an original method to evaluate small bowel motor function based on computer vision analysis of endoluminal images obtained by capsule endoscopy. Our aim was to demonstrate intestinal motor abnormalities in patients with functional bowel disorders by endoluminal vision analysis. Patients with functional bowel disorders (n = 205) and healthy subjects (n = 136) ingested the endoscopic capsule (Pillcam-SB2, Given-Imaging) after overnight fast and 45 min after gastric exit of the capsule a liquid meal (300 ml, 1 kcal/ml) was administered. Endoluminal image analysis was performed by computer vision and machine learning techniques to define the normal range and to identify clusters of abnormal function. After training the algorithm, we used 196 patients and 48 healthy subjects, completely naive, as test set. In the test set, 51 patients (26%) were detected outside the normal range (P < 0.001 vs. 3 healthy subjects) and clustered into hypo- and hyperdynamic subgroups compared with healthy subjects. Patients with hypodynamic behavior (n = 38) exhibited less luminal closure sequences (41 ± 2% of the recording time vs. 61 ± 2%; P < 0.001) and more static sequences (38 ± 3 vs. 20 ± 2%; P < 0.001); in contrast, patients with hyperdynamic behavior (n = 13) had an increased proportion of luminal closure sequences (73 ± 4 vs. 61 ± 2%; P = 0.029) and more high-motion sequences (3 ± 1 vs. 0.5 ± 0.1%; P < 0.001). Applying an original methodology, we have developed a novel classification of functional gut disorders based on objective, physiological criteria of small bowel function.  
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  Publisher American Physiological Society Place of Publication Editor  
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  Notes MILAB; OR;MV Approved no  
  Call Number Admin @ si @ MDS2015 Serial 2666  
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