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	Author	Fernando Vilariño; Panagiota Spyridonos; Jordi Vitria; Fernando Azpiroz; Petia Radeva
	Title	Cascade analysis for intestinal contraction detection			Type	Conference Article
	Year	2006	Publication	20th International Congress and exhibition Computer Assisted Radiology and Surgery	Abbreviated Journal
	Volume		Issue		Pages	9-10
	Keywords	intestine video analysis, anisotropic features, support vector machine, cascade of classifiers
	Abstract	In this work, we address the study of intestinal contractions in a novel approach based on a machine learning framework to process data from Wireless Capsule Video Endoscopy. Wireless endoscopy represents a unique way to visualize the intestine motility by creating long videos to visualize intestine dynamics. In this paper we argue that to analyze huge amount of wireless endoscopy data and define robust methods for contraction detection we should base our approach on sophisticated machine learning techniques. In particular, we propose a cascade of classifiers in order to remove different physiological phenomenon and obtain the motility pattern of small intestines. Our results show obtaining high specificity and sensitivity rates that highlight the high efficiency of the selected approach and support the feasibility of the proposed methodology in the automatic detection and analysis of intestine contractions.
	Address	Osaka (Japan)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference	CARS
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VSV2006a; IAM @ iam @ VSV2006h			Serial	726
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	Author	Fernando Vilariño; Panagiota Spyridonos; Jordi Vitria; Fernando Azpiroz; Petia Radeva
	Title	Automatic Detection of Intestinal Juices in Wireless Capsule Video Endoscopy			Type	Conference Article
	Year	2006	Publication	18th International Conference on Pattern Recognition	Abbreviated Journal
	Volume	4	Issue		Pages	719-722
	Keywords	Clinical diagnosis , Endoscopes , Fluids and secretions , Gabor filters , Hospitals , Image sequence analysis , Intestines , Lighting , Shape , Visualization
	Abstract	Wireless capsule video endoscopy is a novel and challenging clinical technique, whose major reported drawback relates to the high amount of time needed for video visualization. In this paper, we propose a method for the rejection of the parts of the video resulting not valid for analysis by means of automatic detection of intestinal juices. We applied Gabor filters for the characterization of the bubble-like shape of intestinal juices in fasting patients. Our method achieves a significant reduction in visualization time, with no relevant loss of valid frames. The proposed approach is easily extensible to other image analysis scenarios where the described pattern of bubbles can be found.
	Address	Hong Kong
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1051-4651	ISBN	0-7695-2521-0	Medium
	Area	800	Expedition		Conference	ICPR
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ VSV2006b; IAM @ iam @ VSV2006g			Serial	727
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	Author	Fernando Vilariño; Panagiota Spyridonos; Petia Radeva; Jordi Vitria; Fernando Azpiroz; Juan Malagelada
	Title	Method for automatic classification of in vivo images			Type	Patent
	Year	2010	Publication	US 2010/0046816	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	A method for automatically detecting a post-duodenal boundary in an image stream of the gastrointestinal (GI) tract. The image stream is sampled to obtain a reduced set of images for processing. The reduced set of images is filtered to remove non-valid frames or non-valid portions of frames, thereby generating a filtered set of valid images. A polar representation of the valid images is generated. Textural features of the polar representation are processed to detect the post-duodenal boundary of the GI tract.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	IAM @ iam @ VSR2010			Serial	1702
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	Author	Fernando Vilariño; Panagiota Spyridonos; Petia Radeva; Jordi Vitria; Fernando Azpiroz; Juan Malagelada
	Title	Device, system and method for measurement and analysis of contractile activity			Type	Patent
	Year	2009	Publication	US 2009/0202117 A1	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	A method and system for determining intestinal dysfunction condition are provided by classifying and analyzing image frames captured in-vivo. The method and system also relate to the detection of contractile activity in intestinal tracts, to automatic detection of video image frames taken in the gastrointestinal tract including contractile activity, and more particularly to measurement and analysis of contractile activity of the GI tract based on image intensity of in vivo image data.
	Address	Pearl Cohen Zedek Latzer
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	IAM @ iam @ VSR2009			Serial	1704
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	Author	Fernando Vilariño; Petia Radeva
	Title	Patch-Optimized Discriminant Active Contours for Medical Image Segmentation.			Type	Conference Article
	Year	2002	Publication	Iberoamerican Conference on Artificial Intelligence	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Sevilla, Espanya
	Corporate Author				Thesis
	Publisher	Springer Verlag	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IBERAMIA
	Notes	MV;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ ViR2002; IAM @ iam @ VRa2003			Serial	320
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	Author	Fernando Vilariño; Petia Radeva
	Title	Cardiac Segmentation with Discriminant Active Contours			Type	Book Chapter
	Year	2003	Publication		Abbreviated Journal
	Volume		Issue		Pages	211–217
	Keywords
	Abstract	Dynamic tracking of heart moving is one relevant target in medical imag- ing and can be helpful for analyzing heart dynamics in the study of several cardiac diseases. For this aim, a previous segmentation problem of such structures is stated, based on certain relevant features (like edges or intensity levels, textures, etc.) Clas- sical active models have been used, but they fail when overlapping structures or not well-defined contours are present. Automatic feature learning systems may be a pow- erful tool. Discriminant active contours present optimal results in this kind of problem. They are a kind of deformable models that converge to an optimal object segmenta- tion that dynamically adapts to the object contour. The feature space is designed from a filter bank in order to guarantee the search and learning of the set of relevant fea- tures for optimal classification on each part of the object. Tracking of target evolution is obtained through the whole set of images, using information from the actual and previous stages. Feedback systems are implemented to guarantee the minimum well- separable classification set in each segmentation step. Our implementation has been proved with several series of Magnetic Resonance with improved results in segmenta- tion in comparison to previous methods.
	Address	Palma de Mallorca
	Corporate Author				Thesis
	Publisher	IOS Press	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CCIA
	Notes	MV;MILAB;SIAI			Approved	no
	Call Number	BCNPCL @ bcnpcl @ ViR2003; IAM @ iam @ VRa2003			Serial	426
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	Author	Fernando Vilariño; Stephan Ameling; Gerard Lacey; Stephen Patchett; Hugh Mulcahy
	Title	Eye Tracking Search Patterns in Expert and Trainee Colonoscopists: A Novel Method of Assessing Endoscopic Competency?			Type	Journal Article
	Year	2009	Publication	Gastrointestinal Endoscopy	Abbreviated Journal	GI
	Volume	69	Issue	5	Pages	370
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;SIAI			Approved	no
	Call Number	fernando @ fernando @			Serial	2420
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	Author	Ferran Diego
	Title	Alignment of Videos Recorded from Moving Vehicles			Type	Report
	Year	2007	Publication	CVC Technical Report #111	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	CVC (UAB)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS			Approved	no
	Call Number	Admin @ si @ DiS2007			Serial	825
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	Author	Ferran Diego
	Title	Probabilistic Alignment of Video Sequences Recorded by Moving Cameras			Type	Book Whole
	Year	2011	Publication	PhD Thesis, Universitat Autonoma de Barcelona-CVC	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Video alignment consists of integrating multiple video sequences recorded independently into a single video sequence. This means to register both in time (synchronize frames) and space (image registration) so that the two videos sequences can be fused or compared pixel–wise. In spite of being relatively unknown, many applications today may benefit from the availability of robust and efficient video alignment methods. For instance, video surveillance requires to integrate video sequences that are recorded of the same scene at different times in order to detect changes. The problem of aligning videos has been addressed before, but in the relatively simple cases of fixed or rigidly attached cameras and simultaneous acquisition. In addition, most works rely on restrictive assumptions which reduce its difficulty such as linear time correspondence or the knowledge of the complete trajectories of corresponding scene points on the images; to some extent, these assumptions limit the practical applicability of the solutions developed until now. In this thesis, we focus on the challenging problem of aligning sequences recorded at different times from independent moving cameras following similar but not coincident trajectories. More precisely, this thesis covers four studies that advance the state-of-the-art in video alignment. First, we focus on analyzing and developing a probabilistic framework for video alignment, that is, a principled way to integrate multiple observations and prior information. In this way, two different approaches are presented to exploit the combination of several purely visual features (image–intensities, visual words and dense motion field descriptor), and global positioning system (GPS) information. Second, we focus on reformulating the problem into a single alignment framework since previous works on video alignment adopt a divide–and–conquer strategy, i.e., first solve the synchronization, and then register corresponding frames. This also generalizes the ’classic’ case of fixed geometric transform and linear time mapping. Third, we focus on exploiting directly the time domain of the video sequences in order to avoid exhaustive cross–frame search. This provides relevant information used for learning the temporal mapping between pairs of video sequences. Finally, we focus on adapting these methods to the on–line setting for road detection and vehicle geolocation. The qualitative and quantitative results presented in this thesis on a variety of real–world pairs of video sequences show that the proposed method is: robust to varying imaging conditions, different image content (e.g., incoming and outgoing vehicles), variations on camera velocity, and different scenarios (indoor and outdoor) going beyond the state–of–the–art. Moreover, the on–line video alignment has been successfully applied for road detection and vehicle geolocation achieving promising results.
	Address
	Corporate Author				Thesis	Ph.D. thesis
	Publisher	Ediciones Graficas Rey	Place of Publication		Editor	Joan Serrat
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS			Approved	no
	Call Number	Admin @ si @ Die2011			Serial	1787
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	Author	Ferran Diego; Daniel Ponsa; Joan Serrat; Antonio Lopez
	Title	Video Alignment for Difference-spotting			Type	Miscellaneous
	Year	2008	Publication	Proceedings of the ECCV workshop on Multi–camera and Multi–modal Sensor Fusion Algorithms and Applications (M2SFA2 2008), Marseille (France)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	video alignment
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS			Approved	no
	Call Number	ADAS @ adas @ DPS2008			Serial	1079
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	Author	Ferran Diego; Daniel Ponsa; Joan Serrat; Antonio Lopez
	Title	Video alignment for automotive applications			Type	Miscellaneous
	Year	2009	Publication	BMVA one–day technical meeting on vision for automotive applications	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	video alignment
	Abstract
	Address	London, UK
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS			Approved	no
	Call Number	ADAS @ adas @ DPS2009			Serial	1271
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	Author	Ferran Diego; Daniel Ponsa; Joan Serrat; Antonio Lopez
	Title	Vehicle geolocalization based on video synchronization			Type	Conference Article
	Year	2010	Publication	13th Annual International Conference on Intelligent Transportation Systems	Abbreviated Journal
	Volume		Issue		Pages	1511–1516
	Keywords	video alignment
	Abstract	TC8.6 This paper proposes a novel method for estimating the geospatial localization of a vehicle. I uses as input a georeferenced video sequence recorded by a forward-facing camera attached to the windscreen. The core of the proposed method is an on-line video synchronization which finds out the corresponding frame in the georeferenced video sequence to the one recorded at each time by the camera on a second drive through the same track. Once found the corresponding frame in the georeferenced video sequence, we transfer its geospatial information of this frame. The key advantages of this method are: 1) the increase of the update rate and the geospatial accuracy with regard to a standard low-cost GPS and 2) the ability to localize a vehicle even when a GPS is not available or is not reliable enough, like in certain urban areas. Experimental results for an urban environments are presented, showing an average of relative accuracy of 1.5 meters.
	Address	Madeira Island (Portugal)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	2153-0009	ISBN	978-1-4244-7657-2	Medium
	Area		Expedition		Conference	ITSC
	Notes	ADAS			Approved	no
	Call Number	ADAS @ adas @ DPS2010			Serial	1423
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	Author	Ferran Diego; Daniel Ponsa; Joan Serrat; Antonio Lopez
	Title	Video Alignment for Change Detection			Type	Journal Article
	Year	2011	Publication	IEEE Transactions on Image Processing	Abbreviated Journal	TIP
	Volume	20	Issue	7	Pages	1858-1869
	Keywords	video alignment
	Abstract	In this work, we address the problem of aligning two video sequences. Such alignment refers to synchronization, i.e., the establishment of temporal correspondence between frames of the first and second video, followed by spatial registration of all the temporally corresponding frames. Video synchronization and alignment have been attempted before, but most often in the relatively simple cases of fixed or rigidly attached cameras and simultaneous acquisition. In addition, restrictive assumptions have been applied, including linear time correspondence or the knowledge of the complete trajectories of corresponding scene points; to some extent, these assumptions limit the practical applicability of any solutions developed. We intend to solve the more general problem of aligning video sequences recorded by independently moving cameras that follow similar trajectories, based only on the fusion of image intensity and GPS information. The novelty of our approach is to pose the synchronization as a MAP inference problem on a Bayesian network including the observations from these two sensor types, which have been proved complementary. Alignment results are presented in the context of videos recorded from vehicles driving along the same track at different times, for different road types. In addition, we explore two applications of the proposed video alignment method, both based on change detection between aligned videos. One is the detection of vehicles, which could be of use in ADAS. The other is online difference spotting videos of surveillance rounds.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS; IF			Approved	no
	Call Number	DPS 2011; ADAS @ adas @ dps2011			Serial	1705
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	Author	Ferran Diego; G.D. Evangelidis; Joan Serrat
	Title	Night-time outdoor surveillance by mobile cameras			Type	Conference Article
	Year	2012	Publication	1st International Conference on Pattern Recognition Applications and Methods	Abbreviated Journal
	Volume	2	Issue		Pages	365-371
	Keywords
	Abstract	This paper addresses the problem of video surveillance by mobile cameras. We present a method that allows online change detection in night-time outdoor surveillance. Because of the camera movement, background frames are not available and must be “localized” in former sequences and registered with the current frames. To this end, we propose a Frame Localization And Registration (FLAR) approach that solves the problem efficiently. Frames of former sequences define a database which is queried by current frames in turn. To quickly retrieve nearest neighbors, database is indexed through a visual dictionary method based on the SURF descriptor. Furthermore, the frame localization is benefited by a temporal filter that exploits the temporal coherence of videos. Next, the recently proposed ECC alignment scheme is used to spatially register the synchronized frames. Finally, change detection methods apply to aligned frames in order to mark suspicious areas. Experiments with real night sequences recorded by in-vehicle cameras demonstrate the performance of the proposed method and verify its efficiency and effectiveness against other methods.
	Address	Algarve, Portugal
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICPRAM
	Notes	ADAS			Approved	no
	Call Number	Admin @ si @ DES2012			Serial	2035
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	Author	Ferran Diego; Joan Serrat; Antonio Lopez
	Title	Joint spatio-temporal alignment of sequences			Type	Journal Article
	Year	2013	Publication	IEEE Transactions on Multimedia	Abbreviated Journal	TMM
	Volume	15	Issue	6	Pages	1377-1387
	Keywords	video alignment
	Abstract	Video alignment is important in different areas of computer vision such as wide baseline matching, action recognition, change detection, video copy detection and frame dropping prevention. Current video alignment methods usually deal with a relatively simple case of fixed or rigidly attached cameras or simultaneous acquisition. Therefore, in this paper we propose a joint video alignment for bringing two video sequences into a spatio-temporal alignment. Specifically, the novelty of the paper is to formulate the video alignment to fold the spatial and temporal alignment into a single alignment framework. This simultaneously satisfies a frame-correspondence and frame-alignment similarity; exploiting the knowledge among neighbor frames by a standard pairwise Markov random field (MRF). This new formulation is able to handle the alignment of sequences recorded at different times by independent moving cameras that follows a similar trajectory, and also generalizes the particular cases that of fixed geometric transformation and/or linear temporal mapping. We conduct experiments on different scenarios such as sequences recorded simultaneously or by moving cameras to validate the robustness of the proposed approach. The proposed method provides the highest video alignment accuracy compared to the state-of-the-art methods on sequences recorded from vehicles driving along the same track at different times.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1520-9210	ISBN		Medium
	Area		Expedition		Conference
	Notes	ADAS			Approved	no
	Call Number	Admin @ si @ DSL2013; ADAS @ adas @			Serial	2228
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