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Debora Gil, Oriol Ramos Terrades, & Raquel Perez. (2021). Topological Radiomics (TOPiomics): Early Detection of Genetic Abnormalities in Cancer Treatment Evolution. In Extended Abstracts GEOMVAP 2019, Trends in Mathematics 15 (Vol. 15, 89–93). Springer Nature.
Abstract: Abnormalities in radiomic measures correlate to genomic alterations prone to alter the outcome of personalized anti-cancer treatments. TOPiomics is a new method for the early detection of variations in tumor imaging phenotype from a topological structure in multi-view radiomic spaces.
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Luca Ginanni Corradini, Simone Balocco, Luciano Maresca, Silvio Vitale, & Matteo Stefanini. (2023). Anatomical Modifications After Stent Implantation: A Comparative Analysis Between CGuard, Wallstent, and Roadsaver Carotid Stents. Journal of Endovascular Therapy, 30(1), 18–24.
Abstract: Abstract
Purpose:
Carotid revascularization can be associated with modifications of the vascular geometry, which may lead to complications. The changes on the vessel angulation before and after a carotid WallStent (WS) implantation are compared against 2 new dual-layer devices, CGuard (CG) and RoadSaver (RS).
Materials and Methods:
The study prospectively recruited 217 consecutive patients (112 GC, 73 WS, and 32 RS, respectively). Angiography projections were explored and the one having a higher arterial angle was selected as a basal view. After stent implantation, a stent control angiography was performed selecting the projection having the maximal angle. The same procedure is followed in all the 3 stent types to guarantee comparable conditions. The angulation changes on the stented segments were quantified from both angiographies. The statistical analysis quantitatively compared the pre-and post-angles for the 3 stent types. The results are qualitatively illustrated using boxplots. Finally, the relation between pre- and post-angles measurements is analyzed using linear regression.
Results:
For CG, no statistical difference in the axial vessel geometry between the basal and postprocedural angles was found. For WS and RS, statistical difference was found between pre- and post-angles. The regression analysis shows that CG induces lower changes from the original curvature with respect to WS and RS.
Conclusion:
Based on our results, CG determines minor changes over the basal morphology than WS and RS stents. Hence, CG respects better the native vessel anatomy than the other stents.
Level of Evidence: Level 4, Case Series.
Keywords: Ginanni Corradini L, Balocco S, Maresca L, Vitale S, Stefanini M.
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Marta Diez-Ferrer, Debora Gil, Cristian Tebe, & Carles Sanchez. (2018). Positive Airway Pressure to Enhance Computed Tomography Imaging for Airway Segmentation for Virtual Bronchoscopic Navigation. RES - Respiration, 96(6), 525–534.
Abstract: Abstract
RATIONALE:
Virtual bronchoscopic navigation (VBN) guidance to peripheral pulmonary lesions is often limited by insufficient segmentation of the peripheral airways.
OBJECTIVES:
To test the effect of applying positive airway pressure (PAP) during CT acquisition to improve segmentation, particularly at end-expiration.
METHODS:
CT acquisitions in inspiration and expiration with 4 PAP protocols were recorded prospectively and compared to baseline inspiratory acquisitions in 20 patients. The 4 protocols explored differences between devices (flow vs. turbine), exposures (within seconds vs. 15-min) and pressure levels (10 vs. 14 cmH2O). Segmentation quality was evaluated with the number of airways and number of endpoints reached. A generalized mixed-effects model explored the estimated effect of each protocol.
MEASUREMENTS AND MAIN RESULTS:
Patient characteristics and lung function did not significantly differ between protocols. Compared to baseline inspiratory acquisitions, expiratory acquisitions after 15 min of 14 cmH2O PAP segmented 1.63-fold more airways (95% CI 1.07-2.48; p = 0.018) and reached 1.34-fold more endpoints (95% CI 1.08-1.66; p = 0.004). Inspiratory acquisitions performed immediately under 10 cmH2O PAP reached 1.20-fold (95% CI 1.09-1.33; p < 0.001) more endpoints; after 15 min the increase was 1.14-fold (95% CI 1.05-1.24; p < 0.001).
CONCLUSIONS:
CT acquisitions with PAP segment more airways and reach more endpoints than baseline inspiratory acquisitions. The improvement is particularly evident at end-expiration after 15 min of 14 cmH2O PAP. Further studies must confirm that the improvement increases diagnostic yield when using VBN to evaluate peripheral pulmonary lesions.
Keywords: Multidetector computed tomography; Bronchoscopy; Continuous positive airway pressure; Image enhancement; Virtual bronchoscopic navigation
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Jorge Bernal, Aymeric Histace, Marc Masana, Quentin Angermann, Cristina Sanchez Montes, Cristina Rodriguez de Miguel, et al. (2019). GTCreator: a flexible annotation tool for image-based datasets. IJCAR - International Journal of Computer Assisted Radiology and Surgery, 14(2), 191–201.
Abstract: Abstract Purpose: Methodology evaluation for decision support systems for health is a time consuming-task. To assess performance of polyp detection
methods in colonoscopy videos, clinicians have to deal with the annotation
of thousands of images. Current existing tools could be improved in terms of
exibility and ease of use. Methods:We introduce GTCreator, a exible annotation tool for providing image and text annotations to image-based datasets.
It keeps the main basic functionalities of other similar tools while extending
other capabilities such as allowing multiple annotators to work simultaneously
on the same task or enhanced dataset browsing and easy annotation transfer aiming to speed up annotation processes in large datasets. Results: The
comparison with other similar tools shows that GTCreator allows to obtain
fast and precise annotation of image datasets, being the only one which offers
full annotation editing and browsing capabilites. Conclusions: Our proposed
annotation tool has been proven to be efficient for large image dataset annota-
tion, as well as showing potential of use in other stages of method evaluation
such as experimental setup or results analysis.
Keywords: Annotation tool; Validation Framework; Benchmark; Colonoscopy; Evaluation
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Anton Cervantes, Gemma Sanchez, Josep Llados, Agnes Borras, & Ana Rodriguez. (2006). Biometric Recognition Based on Line Shape Descriptors. In Lecture Notes in Computer Science (Vol. 3926, 346–357,). Springer Link.
Abstract: Abstract. In this paper we propose biometric descriptors inspired by shape signatures traditionally used in graphics recognition approaches. In particular several methods based on line shape descriptors used to iden- tify newborns from the biometric information of the ears are developed. The process steps are the following: image acquisition, ear segmentation, ear normalization, feature extraction and identification. Several shape signatures are defined from contour images. These are formulated in terms of zoning and contour crossings descriptors. Experimental results are presented to demonstrate the effectiveness of the used techniques.
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Sergio Escalera, Xavier Baro, Jordi Vitria, & Petia Radeva. (2009). Text Detection in Urban Scenes (video sample). In 12th International Conference of the Catalan Association for Artificial Intelligence (Vol. 202, 35–44).
Abstract: Abstract. Text detection in urban scenes is a hard task due to the high variability of text appearance: different text fonts, changes in the point of view, or partial occlusion are just a few problems. Text detection can be specially suited for georeferencing business, navigation, tourist assistance, or to help visual impaired people. In this paper, we propose a general methodology to deal with the problem of text detection in outdoor scenes. The method is based on learning spatial information of gradient based features and Census Transform images using a cascade of classifiers. The method is applied in the context of Mobile Mapping systems, where a mobile vehicle captures urban image sequences. Moreover, a cover data set is presented and tested with the new methodology. The results show high accuracy when detecting multi-linear text regions with high variability of appearance, at same time that it preserves a low false alarm rate compared to classical approaches
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O. Fors, J. Nuñez, Xavier Otazu, A. Prades, & Robert D. Cardinal. (2010). Improving the Ability of Image Sensors to Detect Faint Stars and Moving Objects Using Image Deconvolution Techniques. SENS - Sensors, 10(3), 1743–1752.
Abstract: Abstract: In this paper we show how the techniques of image deconvolution can increase the ability of image sensors as, for example, CCD imagers, to detect faint stars or faint orbital objects (small satellites and space debris). In the case of faint stars, we show that this benefit is equivalent to double the quantum efficiency of the used image sensor or to increase the effective telescope aperture by more than 30% without decreasing the astrometric precision or introducing artificial bias. In the case of orbital objects, the deconvolution technique can double the signal-to-noise ratio of the image, which helps to discover and control dangerous objects as space debris or lost satellites. The benefits obtained using CCD detectors can be extrapolated to any kind of image sensors.
Keywords: image processing; image deconvolution; faint stars; space debris; wavelet transform
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Salvatore Tabbone, & Oriol Ramos Terrades. (2014). An Overview of Symbol Recognition. In D. Doermann, & K. Tombre (Eds.), Handbook of Document Image Processing and Recognition (Vol. D, pp. 523–551). Springer London.
Abstract: According to the Cambridge Dictionaries Online, a symbol is a sign, shape, or object that is used to represent something else. Symbol recognition is a subfield of general pattern recognition problems that focuses on identifying, detecting, and recognizing symbols in technical drawings, maps, or miscellaneous documents such as logos and musical scores. This chapter aims at providing the reader an overview of the different existing ways of describing and recognizing symbols and how the field has evolved to attain a certain degree of maturity.
Keywords: Pattern recognition; Shape descriptors; Structural descriptors; Symbolrecognition; Symbol spotting
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Jose Elias Yauri, M. Lagos, H. Vega-Huerta, P. de-la-Cruz, G.L.E Maquen-Niño, & E. Condor-Tinoco. (2023). Detection of Epileptic Seizures Based-on Channel Fusion and Transformer Network in EEG Recordings. IJACSA - International Journal of Advanced Computer Science and Applications, 14(5), 1067–1074.
Abstract: According to the World Health Organization, epilepsy affects more than 50 million people in the world, and specifically, 80% of them live in developing countries. Therefore, epilepsy has become among the major public issue for many governments and deserves to be engaged. Epilepsy is characterized by uncontrollable seizures in the subject due to a sudden abnormal functionality of the brain. Recurrence of epilepsy attacks change people’s lives and interferes with their daily activities. Although epilepsy has no cure, it could be mitigated with an appropriated diagnosis and medication. Usually, epilepsy diagnosis is based on the analysis of an electroencephalogram (EEG) of the patient. However, the process of searching for seizure patterns in a multichannel EEG recording is a visual demanding and time consuming task, even for experienced neurologists. Despite the recent progress in automatic recognition of epilepsy, the multichannel nature of EEG recordings still challenges current methods. In this work, a new method to detect epilepsy in multichannel EEG recordings is proposed. First, the method uses convolutions to perform channel fusion, and next, a self-attention network extracts temporal features to classify between interictal and ictal epilepsy states. The method was validated in the public CHB-MIT dataset using the k-fold cross-validation and achieved 99.74% of specificity and 99.15% of sensitivity, surpassing current approaches.
Keywords: Epilepsy; epilepsy detection; EEG; EEG channel fusion; convolutional neural network; self-attention
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Patricia Marquez. (2010). Conditions Ensuring Accuracy of Local Optical Flow Schemes (Vol. 157). Master's thesis, , Bellaterra 08193, Barcelona, Spain.
Abstract: Accurate computation of optical flow is a key-point in many image processing fields. Detection of anomalous and unpredicted agents (such as pedestrians, bikers or cars) in urban scenes or pathology discrimination in medical imaging sequences, to mention just a two. The above kinds sequences present two main difficulties for standard optical flow techniques. On one hand, variability in acquisition conditions (illuminance, medical imaging modality, ...) force an alterantive representation for images fulfilling the britghtness constancy constrain. On the hand, current variational schemes produce oversmoothed fields unable to properly model discontinuous behaviours such as collisions or functionless pathological areas. This master project explores the abilities and limitations of local and global optical flow approaches. The master student will put especial emphasis in the theoretical grounds behind in order to design a variational framework combining the theoretical advantages of the considered techniques. In particular an optical flow based on Gabor phase tracking (developed in the group for medical imaging) will be generalized to urban scenes.
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Francesco Ciompi, Oriol Pujol, Carlo Gatta, O. Rodriguez-Leor, J. Mauri, & Petia Radeva. (2010). Fusing in-vitro and in-vivo intravascular ultrasound data for plaque characterization. IJCI - International Journal of Cardiovascular Imaging, 26(7), 763–779.
Abstract: Accurate detection of in-vivo vulnerable plaque in coronary arteries is still an open problem. Recent studies show that it is highly related to tissue structure and composition. Intravascular Ultrasound (IVUS) is a powerful imaging technique that gives a detailed cross-sectional image of the vessel, allowing to explore arteries morphology. IVUS data validation is usually performed by comparing post-mortem (in-vitro) IVUS data and corresponding histological analysis of the tissue. The main drawback of this method is the few number of available case studies and validated data due to the complex procedure of histological analysis of the tissue. On the other hand, IVUS data from in-vivo cases is easy to obtain but it can not be histologically validated. In this work, we propose to enhance the in-vitro training data set by selectively including examples from in-vivo plaques. For this purpose, a Sequential Floating Forward Selection method is reformulated in the context of plaque characterization. The enhanced classifier performance is validated on in-vitro data set, yielding an overall accuracy of 91.59% in discriminating among fibrotic, lipidic and calcified plaques, while reducing the gap between in-vivo and in-vitro data analysis. Experimental results suggest that the obtained classifier could be properly applied on in-vivo plaque characterization and also demonstrate that the common hypothesis of assuming the difference between in-vivo and in-vitro as negligible is incorrect.
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Danna Xue, Fei Yang, Pei Wang, Luis Herranz, Jinqiu Sun, Yu Zhu, et al. (2022). SlimSeg: Slimmable Semantic Segmentation with Boundary Supervision. In 30th ACM International Conference on Multimedia (pp. 6539–6548). Association for Computing Machinery.
Abstract: Accurate semantic segmentation models typically require significant computational resources, inhibiting their use in practical applications. Recent works rely on well-crafted lightweight models to achieve fast inference. However, these models cannot flexibly adapt to varying accuracy and efficiency requirements. In this paper, we propose a simple but effective slimmable semantic segmentation (SlimSeg) method, which can be executed at different capacities during inference depending on the desired accuracy-efficiency tradeoff. More specifically, we employ parametrized channel slimming by stepwise downward knowledge distillation during training. Motivated by the observation that the differences between segmentation results of each submodel are mainly near the semantic borders, we introduce an additional boundary guided semantic segmentation loss to further improve the performance of each submodel. We show that our proposed SlimSeg with various mainstream networks can produce flexible models that provide dynamic adjustment of computational cost and better performance than independent models. Extensive experiments on semantic segmentation benchmarks, Cityscapes and CamVid, demonstrate the generalization ability of our framework.
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Ernest Valveny, & Enric Marti. (2001). Learning of structural descriptions of graphic symbols using deformable template matching. In Proc. Sixth Int Document Analysis and Recognition Conf (pp. 455–459).
Abstract: Accurate symbol recognition in graphic documents needs an accurate representation of the symbols to be recognized. If structural approaches are used for recognition, symbols have to be described in terms of their shape, using structural relationships among extracted features. Unlike statistical pattern recognition, in structural methods, symbols are usually manually defined from expertise knowledge, and not automatically infered from sample images. In this work we explain one approach to learn from examples a representative structural description of a symbol, thus providing better information about shape variability. The description of a symbol is based on a probabilistic model. It consists of a set of lines described by the mean and the variance of line parameters, respectively providing information about the model of the symbol, and its shape variability. The representation of each image in the sample set as a set of lines is achieved using deformable template matching.
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Danna Xue, Javier Vazquez, Luis Herranz, Yang Zhang, & Michael S Brown. (2023). Integrating High-Level Features for Consistent Palette-based Multi-image Recoloring. CGF - Computer Graphics Forum, .
Abstract: Achieving visually consistent colors across multiple images is important when images are used in photo albums, websites, and brochures. Unfortunately, only a handful of methods address multi-image color consistency compared to one-to-one color transfer techniques. Furthermore, existing methods do not incorporate high-level features that can assist graphic designers in their work. To address these limitations, we introduce a framework that builds upon a previous palette-based color consistency method and incorporates three high-level features: white balance, saliency, and color naming. We show how these features overcome the limitations of the prior multi-consistency workflow and showcase the user-friendly nature of our framework.
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David Rotger, Misael Rosales, Jaume Garcia, Oriol Pujol, Josefina Mauri, & Petia Radeva. (2003). Active Vessel: A New Multimedia Workstation for Intravascular Ultrasound and Angiography Fusion. Computers in Cardiology, 30, 65–68.
Abstract: AcriveVessel is a new multimedia workstation which enables the visualization, acquisition and handling of both image modalities, on- and ofline. It enables DICOM v3.0 decompression and browsing, video acquisition,repmduction and storage for IntraVascular UltraSound (IVUS) and angiograms with their corresponding ECG,automatic catheter segmentation in angiography images (using fast marching algorithm). BSpline models definition for vessel layers on IVUS images sequence and an extensively validated tool to fuse information. This approach defines the correspondence of every IVUS image with its correspondent point in the angiogram and viceversa. The 3 0 reconstruction of the NUS catheterhessel enables real distance measurements as well as threedimensional visualization showing vessel tortuosity in the space.
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