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Author Carles Sanchez; Debora Gil; T. Gache; N. Koufos; Marta Diez-Ferrer; Antoni Rosell edit   pdf
openurl 
  Title SENSA: a System for Endoscopic Stenosis Assessment Type Conference Article
  Year 2016 Publication 28th Conference of the international Society for Medical Innovation and Technology Abbreviated Journal  
  Volume Issue Pages  
  Keywords  
  Abstract Documenting the severity of a static or dynamic Central Airway Obstruction (CAO) is crucial to establish proper diagnosis and treatment, predict possible treatment effects and better follow-up the patients. The subjective visual evaluation of a stenosis during video-bronchoscopy still remains the most common way to assess a CAO in spite of a consensus among experts for a need to standardize all calculations [1].
The Computer Vision Center in cooperation with the «Hospital de Bellvitge», has developed a System for Endoscopic Stenosis Assessment (SENSA), which computes CAO directly by analyzing standard bronchoscopic data without the need of using other imaging tecnologies.
 
  Address (down) Rotterdam; The Netherlands; October 2016  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference SMIT  
  Notes IAM; Approved no  
  Call Number Admin @ si @ SGG2016 Serial 2942  
Permanent link to this record
 

 
Author Debora Gil; Oriol Ramos Terrades; Elisa Minchole; Carles Sanchez; Noelia Cubero de Frutos; Marta Diez-Ferrer; Rosa Maria Ortiz; Antoni Rosell edit   pdf
url  openurl
  Title Classification of Confocal Endomicroscopy Patterns for Diagnosis of Lung Cancer Type Conference Article
  Year 2017 Publication 6th Workshop on Clinical Image-based Procedures: Translational Research in Medical Imaging Abbreviated Journal  
  Volume 10550 Issue Pages 151-159  
  Keywords  
  Abstract Confocal Laser Endomicroscopy (CLE) is an emerging imaging technique that allows the in-vivo acquisition of cell patterns of potentially malignant lesions. Such patterns could discriminate between inflammatory and neoplastic lesions and, thus, serve as a first in-vivo biopsy to discard cases that do not actually require a cell biopsy.

The goal of this work is to explore whether CLE images obtained during videobronchoscopy contain enough visual information to discriminate between benign and malign peripheral lesions for lung cancer diagnosis. To do so, we have performed a pilot comparative study with 12 patients (6 adenocarcinoma and 6 benign-inflammatory) using 2 different methods for CLE pattern analysis: visual analysis by 3 experts and a novel methodology that uses graph methods to find patterns in pre-trained feature spaces. Our preliminary results indicate that although visual analysis can only achieve a 60.2% of accuracy, the accuracy of the proposed unsupervised image pattern classification raises to 84.6%.

We conclude that CLE images visual information allow in-vivo detection of neoplastic lesions and graph structural analysis applied to deep-learning feature spaces can achieve competitive results.
 
  Address (down) Quebec; Canada; September 2017  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title LNCS  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference CLIP  
  Notes IAM; 600.096; 600.075; 600.145 Approved no  
  Call Number Admin @ si @ GRM2017 Serial 2957  
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Author Carles Sanchez; Debora Gil; Jorge Bernal; F. Javier Sanchez; Marta Diez-Ferrer; Antoni Rosell edit   pdf
openurl 
  Title Navigation Path Retrieval from Videobronchoscopy using Bronchial Branches Type Conference Article
  Year 2016 Publication 19th International Conference on Medical Image Computing and Computer Assisted Intervention Workshops Abbreviated Journal  
  Volume 9401 Issue Pages 62-70  
  Keywords Bronchoscopy navigation; Lumen center; Brochial branches; Navigation path; Videobronchoscopy  
  Abstract Bronchoscopy biopsy can be used to diagnose lung cancer without risking complications of other interventions like transthoracic needle aspiration. During bronchoscopy, the clinician has to navigate through the bronchial tree to the target lesion. A main drawback is the difficulty to check whether the exploration is following the correct path. The usual guidance using fluoroscopy implies repeated radiation of the clinician, while alternative systems (like electromagnetic navigation) require specific equipment that increases intervention costs. We propose to compute the navigated path using anatomical landmarks extracted from the sole analysis of videobronchoscopy images. Such landmarks allow matching the current exploration to the path previously planned on a CT to indicate clinician whether the planning is being correctly followed or not. We present a feasibility study of our landmark based CT-video matching using bronchoscopic videos simulated on a virtual bronchoscopy interactive interface.  
  Address (down) Quebec; Canada; September 2016  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title LNCS  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference MICCAIW  
  Notes IAM; MV; 600.060; 600.075 Approved no  
  Call Number Admin @ si @ SGB2016 Serial 2885  
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Author Carles Sanchez; Antonio Esteban Lansaque; Agnes Borras; Marta Diez-Ferrer; Antoni Rosell; Debora Gil edit   pdf
openurl 
  Title Towards a Videobronchoscopy Localization System from Airway Centre Tracking Type Conference Article
  Year 2017 Publication 12th International Conference on Computer Vision Theory and Applications Abbreviated Journal  
  Volume Issue Pages 352-359  
  Keywords Video-bronchoscopy; Lung cancer diagnosis; Airway lumen detection; Region tracking; Guided bronchoscopy navigation  
  Abstract Bronchoscopists use fluoroscopy to guide flexible bronchoscopy to the lesion to be biopsied without any kind of incision. Being fluoroscopy an imaging technique based on X-rays, the risk of developmental problems and cancer is increased in those subjects exposed to its application, so minimizing radiation is crucial. Alternative guiding systems such as electromagnetic navigation require specific equipment, increase the cost of the clinical procedure and still require fluoroscopy. In this paper we propose an image based guiding system based on the extraction of airway centres from intra-operative videos. Such anatomical landmarks are matched to the airway centreline extracted from a pre-planned CT to indicate the best path to the nodule. We present a
feasibility study of our navigation system using simulated bronchoscopic videos and a multi-expert validation of landmarks extraction in 3 intra-operative ultrathin explorations.
 
  Address (down) Porto; Portugal; February 2017  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference VISAPP  
  Notes IAM; 600.096; 600.075; 600.145 Approved no  
  Call Number Admin @ si @ SEB2017 Serial 2943  
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Author Gemma Sanchez; Josep Llados; Enric Marti edit  url
openurl 
  Title Segmentation and analysis of linial texture in plans Type Conference Article
  Year 1997 Publication Intelligence Artificielle et Complexité. Abbreviated Journal  
  Volume Issue Pages  
  Keywords Structural Texture, Voronoi, Hierarchical Clustering, String Matching.  
  Abstract The problem of texture segmentation and interpretation is one of the main concerns in the field of document analysis. Graphical documents often contain areas characterized by a structural texture whose recognition allows both the document understanding, and its storage in a more compact way. In this work, we focus on structural linial textures of regular repetition contained in plan documents. Starting from an atributed graph which represents the vectorized input image, we develop a method to segment textured areas and recognize their placement rules. We wish to emphasize that the searched textures do not follow a predefined pattern. Minimal closed loops of the input graph are computed, and then hierarchically clustered. In this hierarchical clustering, a distance function between two closed loops is defined in terms of their areas difference and boundary resemblance computed by a string matching procedure. Finally it is noted that, when the texture consists of isolated primitive elements, the same method can be used after computing a Voronoi Tesselation of the input graph.  
  Address (down) Paris, France  
  Corporate Author Thesis  
  Publisher Place of Publication Paris Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference AERFAI  
  Notes DAG;IAM; Approved no  
  Call Number IAM @ iam @ SLM1997 Serial 1649  
Permanent link to this record
 

 
Author David Roche; Debora Gil; Jesus Giraldo edit   pdf
openurl 
  Title Using statistical inference for designing termination conditions ensuring convergence of Evolutionary Algorithms Type Conference Article
  Year 2011 Publication 11th European Conference on Artificial Life Abbreviated Journal  
  Volume Issue Pages  
  Keywords  
  Abstract A main challenge in Evolutionary Algorithms (EAs) is determining a termination condition ensuring stabilization close to the optimum in real-world applications. Although for known test functions distribution-based quantities are good candidates (as far as suitable parameters are used), in real-world problems an open question still remains unsolved. How can we estimate an upper-bound for the termination condition value ensuring a given accuracy for the (unknown) EA solution?
We claim that the termination problem would be fully solved if we defined a quantity (depending only on the EA output) behaving like the solution accuracy. The open question would be, then, satisfactorily answered if we had a model relating both quantities, since accuracy could be predicted from the alternative quantity. We present a statistical inference framework addressing two topics: checking the correlation between the two quantities and defining a regression model for predicting (at a given confidence level) accuracy values from the EA output.
 
  Address (down) Paris, France  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference ECAL  
  Notes IAM; Approved no  
  Call Number IAM @ iam @ RGG2011b Serial 1678  
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Author Ferran Poveda; Debora Gil;Enric Marti edit   pdf
doi  isbn
openurl 
  Title Multi-resolution DT-MRI cardiac tractography Type Conference Article
  Year 2012 Publication Statistical Atlases And Computational Models Of The Heart: Imaging and Modelling Challenges Abbreviated Journal  
  Volume 7746 Issue Pages 270-277  
  Keywords  
  Abstract Even using objective measures from DT-MRI no consensus about myocardial architecture has been achieved so far. Streamlining provides good reconstructions at low level of detail, but falls short to give global abstract interpretations. In this paper, we present a multi-resolution methodology that is able to produce simplified representations of cardiac architecture. Our approach produces a reduced set of tracts that are representative of the main geometric features of myocardial anatomical structure. Experiments show that fiber geometry is preserved along reductions, which validates the simplified model for interpretation of cardiac architecture.  
  Address (down) Nice, France  
  Corporate Author Thesis  
  Publisher Springer Berlin Heidelberg Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title LNCS  
  Series Volume Series Issue Edition  
  ISSN 0302-9743 ISBN 978-3-642-36960-5 Medium  
  Area Expedition Conference STACOM  
  Notes IAM Approved no  
  Call Number IAM @ iam @ PGM2012 Serial 1986  
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Author Debora Gil;Agnes Borras;Ruth Aris;Mariano Vazquez;Pierre Lafortune; Guillame Houzeaux edit   pdf
doi  isbn
openurl 
  Title What a difference in biomechanics cardiac fiber makes Type Conference Article
  Year 2012 Publication Statistical Atlases And Computational Models Of The Heart: Imaging and Modelling Challenges Abbreviated Journal  
  Volume 7746 Issue Pages 253-260  
  Keywords  
  Abstract Computational simulations of the heart are a powerful tool for a comprehensive understanding of cardiac function and its intrinsic relationship with its muscular architecture. Cardiac biomechanical models require a vector field representing the orientation of cardiac fibers. A wrong orientation of the fibers can lead to a
non-realistic simulation of the heart functionality. In this paper we explore the impact of the fiber information on the simulated biomechanics of cardiac muscular anatomy. We have used the John Hopkins database to perform a biomechanical simulation using both a synthetic benchmark fiber distribution and the data obtained experimentally from DTI. Results illustrate how differences in fiber orientation affect heart deformation along cardiac cycle.
 
  Address (down) Nice, France  
  Corporate Author Thesis  
  Publisher Springer Berlin Heidelberg Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0302-9743 ISBN 978-3-642-36960-5 Medium  
  Area Expedition Conference STACOM  
  Notes IAM Approved no  
  Call Number IAM @ iam @ GBA2012 Serial 1987  
Permanent link to this record
 

 
Author Sergio Vera; Debora Gil; Agnes Borras; F. Javier Sanchez; Frederic Perez; Marius G. Linguraru edit  openurl
  Title Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs Type Conference Article
  Year 2011 Publication Workshop on Computational and Clinical Applications in Abdominal Imaging Abbreviated Journal  
  Volume 7029 Issue Pages 223-230  
  Keywords  
  Abstract Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations.  
  Address (down) Nice, France  
  Corporate Author Thesis  
  Publisher Springer Berlin Heidelberg Place of Publication Editor In H. Yoshida et al  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference ABDI  
  Notes IAM; MV Approved no  
  Call Number VGB2011 Serial 2036  
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Author A. M. Here; B. C. Lopez; Debora Gil; J. J. Camarero; Jordi Martinez-Vilalta edit   pdf
url  openurl
  Title A new software to analyse wood anatomical features in conifer species Type Conference Article
  Year 2013 Publication International Symposium on Wood Structure in Plant Biology and Ecology Abbreviated Journal  
  Volume Issue Pages  
  Keywords  
  Abstract International Symposium on Wood Structure in Plant Biology and Ecology  
  Address (down) Naples; Italy; March 2013  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN ISBN Medium  
  Area Expedition Conference WSE  
  Notes IAM Approved no  
  Call Number Admin @ si @ HLG2013 Serial 2303  
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