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	Author	Jaume Garcia; Debora Gil; Francesc Carreras ; Sandra Pujades; R.Leta; Xavier Alomar; Guillem Pons-LLados
	Title	Un Model 3D del Ventricle Esquerre Integrant Anatomia i Funcionalitat			Type	Conference Article
	Year	2008	Publication	XX Congrés de la Societat Catalana de Cardiologia, Actes del Congres	Abbreviated Journal
	Volume		Issue		Pages	122
	Keywords
	Abstract	Els canvis en la dinàmica del Ventricle Esquerre (VE) reflecteixen la majoria de malalties cardiovasculars . Els avenços en imatge mèdica han impulsat la recerca en models i simulacions de la dinàmica 3D del VE . La majoria dels models existents sols consideren l’anatomia externa del VE i no permeten una avaluació de l’acoblament electromecànic . Donat que la mecànica d’un muscle depèn de la orientació de les seves fibres, un model realista hauria d’incloure la disposició espacial de la banda ventricular helicoidal (BVH) . Proposem desenvolupar un model del VE adaptat a cada pacient que integri, per primer cop, l’anatomia de la banda ventricular, l’anatomia externa del VE i la seva funcionalitat, per a una millor determinació del patró d’activació electromecànica
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Barcelona	Editor
	Language	catalan	Summary Language	catalan	Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGC2008c			Serial	1504
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	Author	Jaume Garcia; Debora Gil; Francesc Carreras; Sandra Pujades; R.Leta
	Title	Modelització 4-Dimensional de la Funció Siatólica del Ventricle Esquerre			Type	Conference Article
	Year	2007	Publication	XIX Congrés de la Societat Catalana de Cardiologia de Barcelona	Abbreviated Journal
	Volume		Issue		Pages	133-134
	Keywords
	Abstract	L’evolució tecnològica en el tractament de les imatges mèdiques permet reconstruir, amb el software apropiat, imatges tridimensionals de les estructures cardiovasculars i dotar-les de moviment. Les imatges 4D resultants faciliten l’estudi de la fisiopatologia de la insuficiència cardíaca en base als transtorns de l’activació electromecànica ventricular, el que pot ser d’interès en el procés de selecció de pacients candidats a teràpies de resincronització. Presentem els resultats preliminars de la reconstrucció 4D del ventricle esquerre (VE) a partir de les seqüències de tagging miocàrdic del VE.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Barcelona (Spain)	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGC2007			Serial	1505
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	Author	Jaume Garcia; Debora Gil; Joel Barajas; Francesc Carreras; Sandra Pujades; Petia Radeva
	Title	Characterization of ventricular torsion in healthy subjects using Gabor filters and a variational framework			Type	Conference Article
	Year	2006	Publication	Proc. Computers in Cardiology	Abbreviated Journal
	Volume		Issue		Pages	877-880
	Keywords
	Abstract	In this work, we present a fully automated method for tissue deformation estimation in tagged magnetic resonance images (TMRI). Gabor filter banks, tuned independently for each left ventricle level, provide optimally filtered complex images which phase remains constant along the cardiac cycle. This fact can be thought as the brightness constancy condition required by classical optical flow (OF) methods. Pairs of these filtered sequences, together with a variational formulation are used in a second step to obtain dense continuous deformation maps that we call Harmonic Phase Flow. This method has been used to determine reference values of ventricular torsion (VT) in a set of 8 healthy volunteers. The results encourage the use of VT as a useful parameter for ventricular function assessment in clinical routine.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ GGB2006a			Serial	1509
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	Author	Jaume Garcia; Francesc Carreras; Sandra Pujades; Debora Gil
	Title	Regional motion patterns for the Left Ventricle function assessment			Type	Conference Article
	Year	2008	Publication	Proc. 19th Int. Conf. Pattern Recognition ICPR 2008	Abbreviated Journal
	Volume		Issue		Pages	1-4
	Keywords
	Abstract	Regional scores (e.g. strain, perfusion) of the Left Ventricle (LV) functionality are playing an increasing role in the diagnosis of cardiac diseases. A main limitation is the lack of normality models for complementary scores oriented to assessment of the LV integrity. This paper introduces an original framework based on a parametrization of the LV domain, which allows comparison across subjects of local physiological measures of different nature. We compute regional normality patterns in a feature space characterizing the LV function. We show the consistency of the model for the regional motion on healthy and hypokinetic pathological cases
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GCP2008			Serial	1510
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	Author	Enrique Cabello; Cristina Conde; Angel Serrano; Licesio Rodriguez; David Vazquez
	Title	Empleo de sistemas biométricos para el reconocimiento de personas en aeropuertos			Type	Journal Article
	Year	2006	Publication	Instituto Universitario de Investigación sobre Seguridad Interior (IUSI 2006)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Surveillance; Face detection; Face recognition
	Abstract	El presente proyecto se desarrolló a lo largo del año 2005, probando un prototipo de un sistema de verificación facial con imágenes extraídas de las cámaras de video vigilancia del aeropuerto de Barajas. Se diseñaron varios experimentos, agrupados en dos clases. En el primer tipo, el sistema es entrenado con imágenes obtenidas en condiciones de laboratorio y luego probado con imágenes extraídas de las cámaras de video vigilancia del aeropuerto de Barajas. En el segundo caso, tanto las imágenes de entrenamiento como las de prueba corresponden a imágenes extraídas de Barajas. Se ha desarrollado un sistema completo, que incluye adquisición y digitalización de las imágenes, localización y recorte de las caras en escena, verificación de sujetos y obtención de resultados. Los resultados muestran, que, en general, un sistema de verificación facial basado en imágenes puede ser una ayuda a un operario que deba estar vigilando amplias zonas.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	invisible;ADAS			Approved	no
	Call Number	ADAS @ adas @ CCS2006a			Serial	1672
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	Author	Jaume Garcia
	Title	Generalized Active Shape Models Applied to Cardiac Function Analysis			Type	Report
	Year	2004	Publication	CVC Technical Report	Abbreviated Journal
	Volume		Issue	78	Pages
	Keywords	Cardiac Analysis; Deformable Models; Active Contour Models; Active Shape Models; Tagged MRI; HARP; Contrast Echocardiography.
	Abstract	Medical imaging is very useful in the assessment and treatment of many diseases. To deal with the great amount of data provided by imaging scanners and extract quantitative information that physicians can interpret, many analysis algorithms have been developed. Any process of analysis always consists of a first step of segmenting some particular structure. In medical imaging, structures are not always well defined and suffer from noise artifacts thus, ordinary segmentation methods are not well suited. The ones that seem to give better results are those based on deformable models. Nevertheless, despite their capability of mixing image features together with smoothness constraints that may compensate for image irregularities, these are naturally local methods, i. e., each node of the active contour evolve taking into account information about its neighbors and some other weak constraints about flexibility and smoothness, but not about the global shape that they should find. Due to the fact that structures to be segmented are the same for all cases but with some inter and intra-patient variation, the incorporation of a priori knowledge about shape in the segmentation method will provide robustness to it. Active Shape Models is an algorithm based on the creation of a shape model called Point Distribution Model. It performs a segmentation using only shapes similar than those previously learned from a training set that capture most of the variation presented by the structure. This algorithm works by updating shape nodes along a normal segment which often can be too restrictive. For this reason we propose a generalization of this algorithm that we call Generalized Active Shape Models and fully integrates the a priori knowledge given by the Point Distribution Model with deformable models or any other appropriate segmentation method. Two different applications to cardiac imaging of this generalized method are developed and promising results are shown.
	Address	CVC (UAB)
	Corporate Author				Thesis	Master's thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ Gar2004			Serial	1513
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	Author	Jaume Garcia; Albert Andaluz; Debora Gil; Francesc Carreras
	Title	Decoupled External Forces in a Predictor-Corrector Segmentation Scheme for LV Contours in Tagged MR Images			Type	Conference Article
	Year	2010	Publication	32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society	Abbreviated Journal
	Volume		Issue		Pages	4805-4808
	Keywords
	Abstract	Computation of functional regional scores requires proper identification of LV contours. On one hand, manual segmentation is robust, but it is time consuming and requires high expertise. On the other hand, the tag pattern in TMR sequences is a problem for automatic segmentation of LV boundaries. We propose a segmentation method based on a predictorcorrector (Active Contours – Shape Models) scheme. Special stress is put in the definition of the AC external forces. First, we introduce a semantic description of the LV that discriminates myocardial tissue by using texture and motion descriptors. Second, in order to ensure convergence regardless of the initial contour, the external energy is decoupled according to the orientation of the edges in the image potential. We have validated the model in terms of error in segmented contours and accuracy of regional clinical scores.
	Address	Buenos Aires (Argentina)
	Corporate Author	IEEE EMB			Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1557-170X	ISBN	978-1-4244-4123-5	Medium
	Area		Expedition		Conference	EMBC
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GAG2010			Serial	1514
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	Author	M. Gomez; J. Mauri; Eduard Fernandez-Nofrerias; Oriol Rodriguez-Leor; Carme Julia; Debora Gil; Petia Radeva
	Title	Reconstrucción de un modelo espacio-temporal de la luz del vaso a partir de secuencias de ecografía intracoronaria			Type	Conference Article
	Year	2002	Publication	XXXVIII Congreso Nacional de la Sociedad Española de Cardiología.	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;ADAS;MILAB			Approved	no
	Call Number	IAM @ iam @ GMF2002d			Serial	1516
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	Author	Debora Gil
	Title	Geometric Differential Operators for Shape Modelling			Type	Book Whole
	Year	2004	Publication	PhD Thesis, Universitat Autonoma de Barcelona-CVC	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Medical imaging feeds research in many computer vision and image processing fields: image filtering, segmentation, shape recovery, registration, retrieval and pattern matching. Because of their low contrast changes and large variety of artifacts and noise, medical imaging processing techniques relying on an analysis of the geometry of image level sets rather than on intensity values result in more robust treatment. From the starting point of treatment of intravascular images, this PhD thesis ad- dresses the design of differential image operators based on geometric principles for a robust shape modelling and restoration. Among all fields applying shape recovery, we approach filtering and segmentation of image objects. For a successful use in real images, the segmentation process should go through three stages: noise removing, shape modelling and shape recovery. This PhD addresses all three topics, but for the sake of algorithms as automated as possible, techniques for image processing will be designed to satisfy three main principles: a) convergence of the iterative schemes to non-trivial states avoiding image degeneration to a constant image and representing smooth models of the originals; b) smooth asymptotic behav- ior ensuring stabilization of the iterative process; c) fixed parameter values ensuring equal (domain free) performance of the algorithms whatever initial images/shapes. Our geometric approach to the generic equations that model the different processes approached enables defining techniques satisfying all the former requirements. First, we introduce a new curvature-based geometric flow for image filtering achieving a good compromise between noise removing and resemblance to original images. Sec- ond, we describe a new family of diffusion operators that restrict their scope to image level curves and serve to restore smooth closed models from unconnected sets of points. Finally, we design a regularization of snake (distance) maps that ensures its smooth convergence towards any closed shape. Experiments show that performance of the techniques proposed overpasses that of state-of-the-art algorithms.
	Address
	Corporate Author				Thesis	Ph.D. thesis
	Publisher	Ediciones Graficas Rey	Place of Publication	Barcelona (Spain)	Editor	Jordi Saludes i Closa;Petia Radeva
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	84-933652-0-3	Medium	prit
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ GIL2004			Serial	1517
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	Author	Debora Gil
	Title	Regularized Curvature Flow			Type	Report
	Year	2002	Publication	CVC Technical Report	Abbreviated Journal
	Volume		Issue	63	Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher	Computer Vision Centre	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ Gil2002			Serial	1518
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	Author	Debora Gil; Jaume Garcia; Ruth Aris; Guillaume Houzeaux; Manuel Vazquez
	Title	A Riemmanian approach to cardiac fiber architecture modelling			Type	Conference Article
	Year	2009	Publication	1st International Conference on Mathematical & Computational Biomedical Engineering	Abbreviated Journal
	Volume		Issue		Pages	59-62
	Keywords	cardiac fiber architecture; diffusion tensor magnetic resonance imaging; differential (Rie- mannian) geometry.
	Abstract	There is general consensus that myocardial fiber architecture should be modelled in order to fully understand the electromechanical properties of the Left Ventricle (LV). Diffusion Tensor magnetic resonance Imaging (DTI) is the reference image modality for rapid measurement of fiber orientations by means of the tensor principal eigenvectors. In this work, we present a mathematical framework for across subject comparison of the local geometry of the LV anatomy including the fiber architecture from the statistical analysis of DTI studies. We use concepts of differential geometry for defining a parametric domain suitable for statistical analysis of a low number of samples. We use Riemannian metrics to define a consistent computation of DTI principal eigenvector modes of variation. Our framework has been applied to build an atlas of the LV fiber architecture from 7 DTI normal canine hearts.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Swansea (UK)	Editor	Nithiarasu, R.L.R.V.L.
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CMBE
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ FGA2009			Serial	1520
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	Author	Debora Gil; Jaume Garcia; Manuel Vazquez; Ruth Aris; Guillaume Houzeaux
	Title	Patient-Sensitive Anatomic and Functional 3D Model of the Left Ventricle Function			Type	Conference Article
	Year	2008	Publication	8th World Congress on Computational Mechanichs (WCCM8)/5th European Congress on Computational Methods in Applied Sciences and Engineering (ECCOMAS 2008)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Left Ventricle; Electromechanical Models; Image Processing; Magnetic Resonance.
	Abstract	Early diagnosis and accurate treatment of Left Ventricle (LV) dysfunction significantly increases the patient survival. Impairment of LV contractility due to cardiovascular diseases is reflected in its motion patterns. Recent advances in medical imaging, such as Magnetic Resonance (MR), have encouraged research on 3D simulation and modelling of the LV dynamics. Most of the existing 3D models consider just the gross anatomy of the LV and restore a truncated ellipse which deforms along the cardiac cycle. The contraction mechanics of any muscle strongly depends on the spatial orientation of its muscular fibers since the motion that the muscle undergoes mainly takes place along the fibers. It follows that such simplified models do not allow evaluation of the heart electro-mechanical function and coupling, which has recently risen as the key point for understanding the LV functionality . In order to thoroughly understand the LV mechanics it is necessary to consider the complete anatomy of the LV given by the orientation of the myocardial fibres in 3D space as described by Torrent Guasp. We propose developing a 3D patient-sensitive model of the LV integrating, for the first time, the ven- tricular band anatomy (fibers orientation), the LV gross anatomy and its functionality. Such model will represent the LV function as a natural consequence of its own ventricular band anatomy. This might be decisive in restoring a proper LV contraction in patients undergoing pace marker treatment. The LV function is defined as soon as the propagation of the contractile electromechanical pulse has been modelled. In our experiments we have used the wave equation for the propagation of the electric pulse. The electromechanical wave moves on the myocardial surface and should have a conductivity tensor oriented along the muscular fibers. Thus, whatever mathematical model for electric pulse propa- gation [4] we consider, the complete anatomy of the LV should be extracted. The LV gross anatomy is obtained by processing multi slice MR images recorded for each patient. Information about the myocardial fibers distribution can only be extracted by Diffusion Tensor Imag- ing (DTI), which can not provide in vivo information for each patient. As a first approach, we have computed an average model of fibers from several DTI studies of canine hearts. This rough anatomy is the input for our electro-mechanical propagation model simulating LV dynamics. The average fiber orientation is updated until the simulated LV motion agrees with the experimental evidence provided by the LV motion observed in tagged MR (TMR) sequences. Experimental LV motion is recovered by applying image processing, differential geometry and interpolation techniques to 2D TMR slices [5]. The pipeline in figure 1 outlines the interaction between simulations and experimental data leading to our patient-tailored model.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Venezia (Italia)	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	B-31470-08	ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGV2008c			Serial	1521
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	Author	Debora Gil; Aura Hernandez-Sabate; Antoni Carol; Oriol Rodriguez; Petia Radeva
	Title	A Deterministic-Statistic Adventitia Detection in IVUS Images			Type	Conference Article
	Year	2005	Publication	ESC Congress	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Electron microscopy; Unbending; 2D crystal; Interpolation; Approximation
	Abstract	Plaque analysis in IVUS planes needs accurate intima and adventitia models. Large variety in adventitia descriptors difficulties its detection and motivates using a classification strategy for selecting points on the structure. Whatever the set of descriptors used, the selection stage suffers from fake responses due to noise and uncompleted true curves. In order to smooth background noise while strengthening responses, we apply a restricted anisotropic filter that homogenizes grey levels along the image significant structures. Candidate points are extracted by means of a simple semi supervised adaptive classification of the filtered image response to edge and calcium detectors. The final model is obtained by interpolating the former line segments with an anisotropic contour closing technique based on functional extension principles.
	Address	Stockholm; Sweden; September 2005
	Corporate Author				Thesis
	Publisher		Place of Publication	,Sweden (EU)	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ESC
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ RMF2005a			Serial	1523
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	Author	Debora Gil; Aura Hernandez-Sabate; Antoni Carol; Oriol Rodriguez; Petia Radeva
	Title	A Deterministic-Statistic Adventitia Detection in IVUS Images			Type	Conference Article
	Year	2005	Publication	3rd International workshop on International Workshop on Functional Imaging and Modeling of the Heart	Abbreviated Journal
	Volume		Issue		Pages	65-74
	Keywords	Electron microscopy; Unbending; 2D crystal; Interpolation; Approximation
	Abstract	Plaque analysis in IVUS planes needs accurate intima and adventitia models. Large variety in adventitia descriptors difficulties its detection and motivates using a classification strategy for selecting points on the structure. Whatever the set of descriptors used, the selection stage suffers from fake responses due to noise and uncompleted true curves. In order to smooth background noise while strengthening responses, we apply a restricted anisotropic filter that homogenizes grey levels along the image significant structures. Candidate points are extracted by means of a simple semi supervised adaptive classification of the filtered image response to edge and calcium detectors. The final model is obtained by interpolating the former line segments with an anisotropic contour closing technique based on functional extension principles.
	Address	Barcelona; June 2005
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	FIMH
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ RMF2005			Serial	1524
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	Author	Debora Gil; Oriol Rodriguez; J. Mauri; Petia Radeva
	Title	Statistical descriptors of the Myocardial perfusion in angiographic images			Type	Conference Article
	Year	2006	Publication	Proc. Computers in Cardiology	Abbreviated Journal
	Volume		Issue		Pages	677-680
	Keywords	Anisotropic processing; intravascular ultrasound (IVUS); vessel border segmentation; vessel structure classification.
	Abstract	Restoration of coronary flow after primary percutaneous coronary intervention in acute myocardial infarction does not always correlate with adequate myocardial perfusion. Recently, coronary angiography has been used to assess microcirculation integrity (Myocardial BlushAnalysis, MBA). Although MBA correlates with patient prognosis there are few image processing methods addressing objective perfusion quantification. The goal of this work is to develop statistical descriptors of the myocardial dyeing pattern allowing objective assessment of myocardial perfusion. Experiments on healthy right coronary arteries show that our approach allows reliable measurements without any specific image acquisition protocol.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ GRR2006			Serial	1528
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