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Author |
Debora Gil; Oriol Rodriguez-Leor; Petia Radeva; J. Mauri |
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Title |
Myocardial Perfusion Characterization From Contrast Angiography Spectral Distribution |
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2008 |
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IEEE Transactions on Medical Imaging |
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27 |
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5 |
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641-649 |
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Contrast angiography; myocardial perfusion; spectral analysis. |
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Despite recovering a normal coronary flow after acute myocardial infarction, percutaneous coronary intervention does not guarantee a proper perfusion (irrigation) of the infarcted area. This damage in microcirculation integrity may detrimentally affect the patient survival. Visual assessment of the myocardium opacification in contrast angiography serves to define a subjective score of the microcirculation integrity myocardial blush analysis (MBA). Although MBA correlates with patient prognosis its visual assessment is a very difficult task that requires of a highly expertise training in order to achieve a good intraobserver and interobserver agreement. In this paper, we provide objective descriptors of the myocardium staining pattern by analyzing the spectrum of the image local statistics. The descriptors proposed discriminate among the different phenomena observed in the angiographic sequence and allow defining an objective score of the myocardial perfusion. |
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IAM;MILAB |
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IAM @ iam @ GRR2008 |
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1541 |
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Author |
Jaume Gibert; Ernest Valveny; Horst Bunke |
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Title |
Embedding of Graphs with Discrete Attributes Via Label Frequencies |
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2013 |
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International Journal of Pattern Recognition and Artificial Intelligence |
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IJPRAI |
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27 |
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3 |
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1360002-1360029 |
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Discrete attributed graphs; graph embedding; graph classification |
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Graph-based representations of patterns are very flexible and powerful, but they are not easily processed due to the lack of learning algorithms in the domain of graphs. Embedding a graph into a vector space solves this problem since graphs are turned into feature vectors and thus all the statistical learning machinery becomes available for graph input patterns. In this work we present a new way of embedding discrete attributed graphs into vector spaces using node and edge label frequencies. The methodology is experimentally tested on graph classification problems, using patterns of different nature, and it is shown to be competitive to state-of-the-art classification algorithms for graphs, while being computationally much more efficient. |
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Admin @ si @ GVB2013 |
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2305 |
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Santiago Segui; Laura Igual; Jordi Vitria |
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Title |
Bagged One Class Classifiers in the Presence of Outliers |
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2013 |
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International Journal of Pattern Recognition and Artificial Intelligence |
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IJPRAI |
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27 |
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5 |
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1350014-1350035 |
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One-class Classifier; Ensemble Methods; Bagging and Outliers |
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The problem of training classifiers only with target data arises in many applications where non-target data are too costly, difficult to obtain, or not available at all. Several one-class classification methods have been presented to solve this problem, but most of the methods are highly sensitive to the presence of outliers in the target class. Ensemble methods have therefore been proposed as a powerful way to improve the classification performance of binary/multi-class learning algorithms by introducing diversity into classifiers.
However, their application to one-class classification has been rather limited. In
this paper, we present a new ensemble method based on a non-parametric weighted bagging strategy for one-class classification, to improve accuracy in the presence of outliers. While the standard bagging strategy assumes a uniform data distribution, the method we propose here estimates a probability density based on a forest structure of the data. This assumption allows the estimation of data distribution from the computation of simple univariate and bivariate kernel densities. Experiments using original and noisy versions of 20 different datasets show that bagging ensemble methods applied to different one-class classifiers outperform base one-class classification methods. Moreover, we show that, in noisy versions of the datasets, the non-parametric weighted bagging strategy we propose outperforms the classical bagging strategy in a statistically significant way. |
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OR; 600.046;MV |
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Admin @ si @ SIV2013 |
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2256 |
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R.A.Bendezu; E.Barba; E.Burri; D.Cisternas; Carolina Malagelada; Santiago Segui; Anna Accarino; S.Quiroga; E.Monclus; I.Navazo |
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Title |
Intestinal gas content and distribution in health and in patients with functional gut symptoms |
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Journal Article |
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2015 |
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Neurogastroenterology & Motility |
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NEUMOT |
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27 |
Issue |
9 |
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1249-1257 |
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Abstract |
BACKGROUND:
The precise relation of intestinal gas to symptoms, particularly abdominal bloating and distension remains incompletely elucidated. Our aim was to define the normal values of intestinal gas volume and distribution and to identify abnormalities in relation to functional-type symptoms.
METHODS:
Abdominal computed tomography scans were evaluated in healthy subjects (n = 37) and in patients in three conditions: basal (when they were feeling well; n = 88), during an episode of abdominal distension (n = 82) and after a challenge diet (n = 24). Intestinal gas content and distribution were measured by an original analysis program. Identification of patients outside the normal range was performed by machine learning techniques (one-class classifier). Results are expressed as median (IQR) or mean ± SE, as appropriate.
KEY RESULTS:
In healthy subjects the gut contained 95 (71, 141) mL gas distributed along the entire lumen. No differences were detected between patients studied under asymptomatic basal conditions and healthy subjects. However, either during a spontaneous bloating episode or once challenged with a flatulogenic diet, luminal gas was found to be increased and/or abnormally distributed in about one-fourth of the patients. These patients detected outside the normal range by the classifier exhibited a significantly greater number of abnormal features than those within the normal range (3.7 ± 0.4 vs 0.4 ± 0.1; p < 0.001).
CONCLUSIONS & INFERENCES:
The analysis of a large cohort of subjects using original techniques provides unique and heretofore unavailable information on the volume and distribution of intestinal gas in normal conditions and in relation to functional gastrointestinal symptoms. |
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MILAB |
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Admin @ si @ BBB2015 |
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2667 |
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Author |
Mariella Dimiccoli; Jean-Pascal Jacob; Lionel Moisan |
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Title |
Particle detection and tracking in fluorescence time-lapse imaging: a contrario approach |
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Journal Article |
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2016 |
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Journal of Machine Vision and Applications |
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MVAP |
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27 |
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511-527 |
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particle detection; particle tracking; a-contrario approach; time-lapse fluorescence imaging |
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In this work, we propose a probabilistic approach for the detection and the
tracking of particles on biological images. In presence of very noised and poor
quality data, particles and trajectories can be characterized by an a-contrario
model, that estimates the probability of observing the structures of interest
in random data. This approach, first introduced in the modeling of human visual
perception and then successfully applied in many image processing tasks, leads
to algorithms that do not require a previous learning stage, nor a tedious
parameter tuning and are very robust to noise. Comparative evaluations against
a well established baseline show that the proposed approach outperforms the
state of the art. |
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MILAB; |
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Admin @ si @ DJM2016 |
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2735 |
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Author |
Fei Yang; Luis Herranz; Joost Van de Weijer; Jose Antonio Iglesias; Antonio Lopez; Mikhail Mozerov |
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Title |
Variable Rate Deep Image Compression with Modulated Autoencoder |
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Journal Article |
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2020 |
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IEEE Signal Processing Letters |
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SPL |
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27 |
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331-335 |
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Variable rate is a requirement for flexible and adaptable image and video compression. However, deep image compression methods (DIC) are optimized for a single fixed rate-distortion (R-D) tradeoff. While this can be addressed by training multiple models for different tradeoffs, the memory requirements increase proportionally to the number of models. Scaling the bottleneck representation of a shared autoencoder can provide variable rate compression with a single shared autoencoder. However, the R-D performance using this simple mechanism degrades in low bitrates, and also shrinks the effective range of bitrates. To address these limitations, we formulate the problem of variable R-D optimization for DIC, and propose modulated autoencoders (MAEs), where the representations of a shared autoencoder are adapted to the specific R-D tradeoff via a modulation network. Jointly training this modulated autoencoder and the modulation network provides an effective way to navigate the R-D operational curve. Our experiments show that the proposed method can achieve almost the same R-D performance of independent models with significantly fewer parameters. |
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LAMP; ADAS; 600.141; 600.120; 600.118 |
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Admin @ si @ YHW2020 |
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3346 |
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Author |
Carlos Martin-Isla; Victor M Campello; Cristian Izquierdo; Kaisar Kushibar; Carla Sendra Balcells; Polyxeni Gkontra; Alireza Sojoudi; Mitchell J Fulton; Tewodros Weldebirhan Arega; Kumaradevan Punithakumar; Lei Li; Xiaowu Sun; Yasmina Al Khalil; Di Liu; Sana Jabbar; Sandro Queiros; Francesco Galati; Moona Mazher; Zheyao Gao; Marcel Beetz; Lennart Tautz; Christoforos Galazis; Marta Varela; Markus Hullebrand; Vicente Grau; Xiahai Zhuang; Domenec Puig; Maria A Zuluaga; Hassan Mohy Ud Din; Dimitris Metaxas; Marcel Breeuwer; Rob J van der Geest; Michelle Noga; Stephanie Bricq; Mark E Rentschler; Andrea Guala; Steffen E Petersen; Sergio Escalera; Jose F Rodriguez Palomares; Karim Lekadir |
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Title |
Deep Learning Segmentation of the Right Ventricle in Cardiac MRI: The M&ms Challenge |
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Journal Article |
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2023 |
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IEEE Journal of Biomedical and Health Informatics |
Abbreviated Journal |
JBHI |
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27 |
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7 |
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3302-3313 |
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In recent years, several deep learning models have been proposed to accurately quantify and diagnose cardiac pathologies. These automated tools heavily rely on the accurate segmentation of cardiac structures in MRI images. However, segmentation of the right ventricle is challenging due to its highly complex shape and ill-defined borders. Hence, there is a need for new methods to handle such structure's geometrical and textural complexities, notably in the presence of pathologies such as Dilated Right Ventricle, Tricuspid Regurgitation, Arrhythmogenesis, Tetralogy of Fallot, and Inter-atrial Communication. The last MICCAI challenge on right ventricle segmentation was held in 2012 and included only 48 cases from a single clinical center. As part of the 12th Workshop on Statistical Atlases and Computational Models of the Heart (STACOM 2021), the M&Ms-2 challenge was organized to promote the interest of the research community around right ventricle segmentation in multi-disease, multi-view, and multi-center cardiac MRI. Three hundred sixty CMR cases, including short-axis and long-axis 4-chamber views, were collected from three Spanish hospitals using nine different scanners from three different vendors, and included a diverse set of right and left ventricle pathologies. The solutions provided by the participants show that nnU-Net achieved the best results overall. However, multi-view approaches were able to capture additional information, highlighting the need to integrate multiple cardiac diseases, views, scanners, and acquisition protocols to produce reliable automatic cardiac segmentation algorithms. |
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HUPBA |
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Admin @ si @ MCI2023 |
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3880 |
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Author |
X. Binefa; Jordi Vitria; Xavier Roca |
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Deteccion de profundidad en imagenes monoculares mediante vision activa. |
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1993 |
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Revista de Optica Pura y Aplicada |
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636-648 |
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OR;ISE;MV |
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BCNPCL @ bcnpcl @ BVR1993 |
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144 |
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A. Sanfeliu; Juan J. Villanueva |
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An approach of visual motion analysis |
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2005 |
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Pattern Recognition Letters |
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PRL |
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26 |
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3 |
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355–368 |
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IF: 1.138 |
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ISE @ ise @ SaV2005 |
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Jaume Amores; Petia Radeva |
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Registration and Retrieval of Highly Elastic Bodies using Contextual Information |
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2005 |
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Pattern Recognition Letters |
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PRL |
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11 |
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1720–1731 |
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IF: 1.138 |
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ADAS @ adas @ AmR2005b |
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592 |
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Francesco Ciompi; Oriol Pujol; Carlo Gatta; Oriol Rodriguez-Leor; J. Mauri; Petia Radeva |
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Fusing in-vitro and in-vivo intravascular ultrasound data for plaque characterization |
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2010 |
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International Journal of Cardiovascular Imaging |
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IJCI |
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26 |
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7 |
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763–779 |
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Accurate detection of in-vivo vulnerable plaque in coronary arteries is still an open problem. Recent studies show that it is highly related to tissue structure and composition. Intravascular Ultrasound (IVUS) is a powerful imaging technique that gives a detailed cross-sectional image of the vessel, allowing to explore arteries morphology. IVUS data validation is usually performed by comparing post-mortem (in-vitro) IVUS data and corresponding histological analysis of the tissue. The main drawback of this method is the few number of available case studies and validated data due to the complex procedure of histological analysis of the tissue. On the other hand, IVUS data from in-vivo cases is easy to obtain but it can not be histologically validated. In this work, we propose to enhance the in-vitro training data set by selectively including examples from in-vivo plaques. For this purpose, a Sequential Floating Forward Selection method is reformulated in the context of plaque characterization. The enhanced classifier performance is validated on in-vitro data set, yielding an overall accuracy of 91.59% in discriminating among fibrotic, lipidic and calcified plaques, while reducing the gap between in-vivo and in-vitro data analysis. Experimental results suggest that the obtained classifier could be properly applied on in-vivo plaque characterization and also demonstrate that the common hypothesis of assuming the difference between in-vivo and in-vitro as negligible is incorrect. |
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1569-5794 |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ CPG2010 |
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1305 |
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Josep Llados; Marçal Rusiñol; Alicia Fornes; David Fernandez; Anjan Dutta |
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On the Influence of Word Representations for Handwritten Word Spotting in Historical Documents |
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2012 |
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International Journal of Pattern Recognition and Artificial Intelligence |
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IJPRAI |
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26 |
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5 |
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1263002-126027 |
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Handwriting recognition; word spotting; historical documents; feature representation; shape descriptors Read More: http://www.worldscientific.com/doi/abs/10.1142/S0218001412630025 |
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0,624 JCR
Word spotting is the process of retrieving all instances of a queried keyword from a digital library of document images. In this paper we evaluate the performance of different word descriptors to assess the advantages and disadvantages of statistical and structural models in a framework of query-by-example word spotting in historical documents. We compare four word representation models, namely sequence alignment using DTW as a baseline reference, a bag of visual words approach as statistical model, a pseudo-structural model based on a Loci features representation, and a structural approach where words are represented by graphs. The four approaches have been tested with two collections of historical data: the George Washington database and the marriage records from the Barcelona Cathedral. We experimentally demonstrate that statistical representations generally give a better performance, however it cannot be neglected that large descriptors are difficult to be implemented in a retrieval scenario where word spotting requires the indexation of data with million word images. |
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Admin @ si @ LRF2012 |
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2128 |
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Fadi Dornaika; Abdelmalik Moujahid; Bogdan Raducanu |
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Facial expression recognition using tracked facial actions: Classifier performance analysis |
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2013 |
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Engineering Applications of Artificial Intelligence |
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EAAI |
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26 |
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1 |
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467-477 |
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Visual face tracking; 3D deformable models; Facial actions; Dynamic facial expression recognition; Human–computer interaction |
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In this paper, we address the analysis and recognition of facial expressions in continuous videos. More precisely, we study classifiers performance that exploit head pose independent temporal facial action parameters. These are provided by an appearance-based 3D face tracker that simultaneously provides the 3D head pose and facial actions. The use of such tracker makes the recognition pose- and texture-independent. Two different schemes are studied. The first scheme adopts a dynamic time warping technique for recognizing expressions where training data are given by temporal signatures associated with different universal facial expressions. The second scheme models temporal signatures associated with facial actions with fixed length feature vectors (observations), and uses some machine learning algorithms in order to recognize the displayed expression. Experiments quantified the performance of different schemes. These were carried out on CMU video sequences and home-made video sequences. The results show that the use of dimension reduction techniques on the extracted time series can improve the classification performance. Moreover, these experiments show that the best recognition rate can be above 90%. |
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Elsevier |
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OR; 600.046;MV |
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Admin @ si @ DMR2013 |
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2185 |
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Author |
Katerine Diaz; Francesc J. Ferri; W. Diaz |
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Title |
Incremental Generalized Discriminative Common Vectors for Image Classification |
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2015 |
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IEEE Transactions on Neural Networks and Learning Systems |
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TNNLS |
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26 |
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8 |
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1761 - 1775 |
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Subspace-based methods have become popular due to their ability to appropriately represent complex data in such a way that both dimensionality is reduced and discriminativeness is enhanced. Several recent works have concentrated on the discriminative common vector (DCV) method and other closely related algorithms also based on the concept of null space. In this paper, we present a generalized incremental formulation of the DCV methods, which allows the update of a given model by considering the addition of new examples even from unseen classes. Having efficient incremental formulations of well-behaved batch algorithms allows us to conveniently adapt previously trained classifiers without the need of recomputing them from scratch. The proposed generalized incremental method has been empirically validated in different case studies from different application domains (faces, objects, and handwritten digits) considering several different scenarios in which new data are continuously added at different rates starting from an initial model. |
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2162-237X |
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ADAS; 600.076 |
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Admin @ si @ DFD2015 |
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2547 |
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Author |
Joan M. Nuñez; Jorge Bernal; F. Javier Sanchez; Fernando Vilariño |
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Title |
Growing Algorithm for Intersection Detection (GRAID) in branching patterns |
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2015 |
Publication |
Machine Vision and Applications |
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MVAP |
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26 |
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2 |
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387-400 |
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Bifurcation ; Crossroad; Intersection ;Retina ; Vessel |
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Analysis of branching structures represents a very important task in fields such as medical diagnosis, road detection or biometrics. Detecting intersection landmarks Becomes crucial when capturing the structure of a branching pattern. We present a very simple geometrical model to describe intersections in branching structures based on two conditions: Bounded Tangency condition (BT) and Shortest Branch (SB) condition. The proposed model precisely sets a geometrical characterization of intersections and allows us to introduce a new unsupervised operator for intersection extraction. We propose an implementation that handles the consequences of digital domain operation that,unlike existing approaches, is not restricted to a particular scale and does not require the computation of the thinned pattern. The new proposal, as well as other existing approaches in the bibliography, are evaluated in a common framework for the first time. The performance analysis is based on two manually segmented image data sets: DRIVE retinal image database and COLON-VESSEL data set, a newly created data set of vascular content in colonoscopy frames. We have created an intersection landmark ground truth for each data set besides comparing our method in the only existing ground truth. Quantitative results confirm that we are able to outperform state-of-the-art performancelevels with the advantage that neither training nor parameter tuning is needed. |
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;SIAI |
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Admin @ si @MBS2015 |
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2777 |
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