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Santiago Segui, Laura Igual, & Jordi Vitria. (2013). Bagged One Class Classifiers in the Presence of Outliers. IJPRAI - International Journal of Pattern Recognition and Artificial Intelligence, 27(5), 1350014–1350035.
Abstract: The problem of training classifiers only with target data arises in many applications where non-target data are too costly, difficult to obtain, or not available at all. Several one-class classification methods have been presented to solve this problem, but most of the methods are highly sensitive to the presence of outliers in the target class. Ensemble methods have therefore been proposed as a powerful way to improve the classification performance of binary/multi-class learning algorithms by introducing diversity into classifiers.
However, their application to one-class classification has been rather limited. In
this paper, we present a new ensemble method based on a non-parametric weighted bagging strategy for one-class classification, to improve accuracy in the presence of outliers. While the standard bagging strategy assumes a uniform data distribution, the method we propose here estimates a probability density based on a forest structure of the data. This assumption allows the estimation of data distribution from the computation of simple univariate and bivariate kernel densities. Experiments using original and noisy versions of 20 different datasets show that bagging ensemble methods applied to different one-class classifiers outperform base one-class classification methods. Moreover, we show that, in noisy versions of the datasets, the non-parametric weighted bagging strategy we propose outperforms the classical bagging strategy in a statistically significant way.
Keywords: One-class Classifier; Ensemble Methods; Bagging and Outliers
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Josep Llados, Marçal Rusiñol, Alicia Fornes, David Fernandez, & Anjan Dutta. (2012). On the Influence of Word Representations for Handwritten Word Spotting in Historical Documents. IJPRAI - International Journal of Pattern Recognition and Artificial Intelligence, 26(5), 1263002–126027.
Abstract: 0,624 JCR
Word spotting is the process of retrieving all instances of a queried keyword from a digital library of document images. In this paper we evaluate the performance of different word descriptors to assess the advantages and disadvantages of statistical and structural models in a framework of query-by-example word spotting in historical documents. We compare four word representation models, namely sequence alignment using DTW as a baseline reference, a bag of visual words approach as statistical model, a pseudo-structural model based on a Loci features representation, and a structural approach where words are represented by graphs. The four approaches have been tested with two collections of historical data: the George Washington database and the marriage records from the Barcelona Cathedral. We experimentally demonstrate that statistical representations generally give a better performance, however it cannot be neglected that large descriptors are difficult to be implemented in a retrieval scenario where word spotting requires the indexation of data with million word images.
Keywords: Handwriting recognition; word spotting; historical documents; feature representation; shape descriptors Read More: http://www.worldscientific.com/doi/abs/10.1142/S0218001412630025
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Mikhail Mozerov, Ariel Amato, Xavier Roca, & Jordi Gonzalez. (2009). Solving the Multi Object Occlusion Problem in a Multiple Camera Tracking System. Pattern Recognition and Image Analysis, 165–171.
Abstract: An efficient method to overcome adverse effects of occlusion upon object tracking is presented. The method is based on matching paths of objects in time and solves a complex occlusion-caused problem of merging separate segments of the same path.
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Francesco Ciompi, Simone Balocco, Juan Rigla, Xavier Carrillo, Josefina Mauri, & Petia Radeva. (2016). Computer-Aided Detection of Intra-Coronary Stent in Intravascular Ultrasound Sequences. MP - Medical Physics, 43(10).
Abstract: Purpose: An intraluminal coronary stent is a metal mesh tube deployed in a stenotic artery during Percutaneous Coronary Intervention (PCI), in order to prevent acute vessel occlusion. The identi cation of struts location and the de nition of the stent shape are relevant for PCI planning 15 and for patient follow-up. We present a fully-automatic framework for Computer-Aided Detection
(CAD) of intra-coronary stents in Intravascular Ultrasound (IVUS) image sequences. The CAD system is able to detect stent struts and estimate the stent shape.
Methods: The proposed CAD uses machine learning to provide a comprehensive interpretation of the local structure of the vessel by means of semantic classi cation. The output of the classi cation 20 stage is then used to detect struts and to estimate the stent shape. The proposed approach is validated using a multi-centric data-set of 1,015 images from 107 IVUS sequences containing both metallic and bio-absorbable stents.
Results: The method was able to detect structs in both metallic stents with an overall F-measure of 77.7% and a mean distance of 0.15 mm from manually annotated struts, and in bio-absorbable 25 stents with an overall F-measure of 77.4% and a mean distance of 0.09 mm from manually annotated struts.
Conclusions: The results are close to the inter-observer variability and suggest that the system has the potential of being used as method for aiding percutaneous interventions.
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Simone Balocco, Carlo Gatta, Marina Alberti, Xavier Carrillo, Juan Rigla, & Petia Radeva. (2012). Relation between plaque type, plaque thickness, blood shear stress and plaque stress in coronary arteries assessed by X-ray Angiography and Intravascular Ultrasound. MEDPHYS - Medical Physics, 39(12), 7430–7445.
Abstract: PMID 23231293
PURPOSE:
Atheromatic plaque progression is affected, among others phenomena, by biomechanical, biochemical, and physiological factors. In this paper, the authors introduce a novel framework able to provide both morphological (vessel radius, plaque thickness, and type) and biomechanical (wall shear stress and Von Mises stress) indices of coronary arteries.
METHODS:
First, the approach reconstructs the three-dimensional morphology of the vessel from intravascular ultrasound (IVUS) and Angiographic sequences, requiring minimal user interaction. Then, a computational pipeline allows to automatically assess fluid-dynamic and mechanical indices. Ten coronary arteries are analyzed illustrating the capabilities of the tool and confirming previous technical and clinical observations.
RESULTS:
The relations between the arterial indices obtained by IVUS measurement and simulations have been quantitatively analyzed along the whole surface of the artery, extending the analysis of the coronary arteries shown in previous state of the art studies. Additionally, for the first time in the literature, the framework allows the computation of the membrane stresses using a simplified mechanical model of the arterial wall.
CONCLUSIONS:
Circumferentially (within a given frame), statistical analysis shows an inverse relation between the wall shear stress and the plaque thickness. At the global level (comparing a frame within the entire vessel), it is observed that heavy plaque accumulations are in general calcified and are located in the areas of the vessel having high wall shear stress. Finally, in their experiments the inverse proportionality between fluid and structural stresses is observed.
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Oriol Ramos Terrades, N. Serrano, Albert Gordo, Ernest Valveny, & Alfons Juan-Ciscar. (2010). Interactive-predictive detection of handwritten text blocks. In 17th Document Recognition and Retrieval Conference, part of the IS&T-SPIE Electronic Imaging Symposium (Vol. 7534, 75340Q–75340Q–10).
Abstract: A method for text block detection is introduced for old handwritten documents. The proposed method takes advantage of sequential book structure, taking into account layout information from pages previously transcribed. This glance at the past is used to predict the position of text blocks in the current page with the help of conventional layout analysis methods. The method is integrated into the GIDOC prototype: a first attempt to provide integrated support for interactive-predictive page layout analysis, text line detection and handwritten text transcription. Results are given in a transcription task on a 764-page Spanish manuscript from 1891.
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Maedeh Aghaei, Mariella Dimiccoli, & Petia Radeva. (2015). Towards social interaction detection in egocentric photo-streams. In Proceedings of SPIE, 8th International Conference on Machine Vision , ICMV 2015 (Vol. 9875).
Abstract: Detecting social interaction in videos relying solely on visual cues is a valuable task that is receiving increasing attention in recent years. In this work, we address this problem in the challenging domain of egocentric photo-streams captured by a low temporal resolution wearable camera (2fpm). The major difficulties to be handled in this context are the sparsity of observations as well as unpredictability of camera motion and attention orientation due to the fact that the camera is worn as part of clothing. Our method consists of four steps: multi-faces localization and tracking, 3D localization, pose estimation and analysis of f-formations. By estimating pair-to-pair interaction probabilities over the sequence, our method states the presence or absence of interaction with the camera wearer and specifies which people are more involved in the interaction. We tested our method over a dataset of 18.000 images and we show its reliability on our considered purpose. © (2015) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.
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Sergio Vera, Debora Gil, & Miguel Angel Gonzalez Ballester. (2014). Anatomical parameterization for volumetric meshing of the liver. In SPIE – Medical Imaging (Vol. 9036).
Abstract: A coordinate system describing the interior of organs is a powerful tool for a systematic localization of injured tissue. If the same coordinate values are assigned to specific anatomical landmarks, the coordinate system allows integration of data across different medical image modalities. Harmonic mappings have been used to produce parametric coordinate systems over the surface of anatomical shapes, given their flexibility to set values
at specific locations through boundary conditions. However, most of the existing implementations in medical imaging restrict to either anatomical surfaces, or the depth coordinate with boundary conditions is given at sites
of limited geometric diversity. In this paper we present a method for anatomical volumetric parameterization that extends current harmonic parameterizations to the interior anatomy using information provided by the
volume medial surface. We have applied the methodology to define a common reference system for the liver shape and functional anatomy. This reference system sets a solid base for creating anatomical models of the patient’s liver, and allows comparing livers from several patients in a common framework of reference.
Keywords: Coordinate System; Anatomy Modeling; Parameterization
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Hongxing Gao, Marçal Rusiñol, Dimosthenis Karatzas, & Josep Llados. (2014). Fast Structural Matching for Document Image Retrieval through Spatial Databases. In Document Recognition and Retrieval XXI (Vol. 9021).
Abstract: The structure of document images plays a signi cant role in document analysis thus considerable e orts have been made towards extracting and understanding document structure, usually in the form of layout analysis approaches. In this paper, we rst employ Distance Transform based MSER (DTMSER) to eciently extract stable document structural elements in terms of a dendrogram of key-regions. Then a fast structural matching method is proposed to query the structure of document (dendrogram) based on a spatial database which facilitates the formulation of advanced spatial queries. The experiments demonstrate a signi cant improvement in a document retrieval scenario when compared to the use of typical Bag of Words (BoW) and pyramidal BoW descriptors.
Keywords: Document image retrieval; distance transform; MSER; spatial database
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Sandra Jimenez, Xavier Otazu, Valero Laparra, & Jesus Malo. (2013). Chromatic induction and contrast masking: similar models, different goals? In Human Vision and Electronic Imaging XVIII (Vol. 8651).
Abstract: Normalization of signals coming from linear sensors is an ubiquitous mechanism of neural adaptation.1 Local interaction between sensors tuned to a particular feature at certain spatial position and neighbor sensors explains a wide range of psychophysical facts including (1) masking of spatial patterns, (2) non-linearities of motion sensors, (3) adaptation of color perception, (4) brightness and chromatic induction, and (5) image quality assessment. Although the above models have formal and qualitative similarities, it does not necessarily mean that the mechanisms involved are pursuing the same statistical goal. For instance, in the case of chromatic mechanisms (disregarding spatial information), different parameters in the normalization give rise to optimal discrimination or adaptation, and different non-linearities may give rise to error minimization or component independence. In the case of spatial sensors (disregarding color information), a number of studies have pointed out the benefits of masking in statistical independence terms. However, such statistical analysis has not been performed for spatio-chromatic induction models where chromatic perception depends on spatial configuration. In this work we investigate whether successful spatio-chromatic induction models,6 increase component independence similarly as previously reported for masking models. Mutual information analysis suggests that seeking an efficient chromatic representation may explain the prevalence of induction effects in spatially simple images. © (2013) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.
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Francisco Blanco, Felipe Lumbreras, Joan Serrat, Roswitha Siener, Silvia Serranti, Giuseppe Bonifazi, et al. (2014). Taking advantage of Hyperspectral Imaging classification of urinary stones against conventional IR Spectroscopy. JBiO - Journal of Biomedical Optics, 19(12), 126004–1 - 126004–9.
Abstract: The analysis of urinary stones is mandatory for the best management of the disease after the stone passage in order to prevent further stone episodes. Thus the use of an appropriate methodology for an individualized stone analysis becomes a key factor for giving the patient the most suitable treatment. A recently developed hyperspectral imaging methodology, based on pixel-to-pixel analysis of near-infrared spectral images, is compared to the reference technique in stone analysis, infrared (IR) spectroscopy. The developed classification model yields >90% correct classification rate when compared to IR and is able to precisely locate stone components within the structure of the stone with a 15 µm resolution. Due to the little sample pretreatment, low analysis time, good performance of the model, and the automation of the measurements, they become analyst independent; this methodology can be considered to become a routine analysis for clinical laboratories.
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R.A.Bendezu, E.Barba, E.Burri, D.Cisternas, Carolina Malagelada, Santiago Segui, et al. (2015). Intestinal gas content and distribution in health and in patients with functional gut symptoms. NEUMOT - Neurogastroenterology & Motility, 27(9), 1249–1257.
Abstract: BACKGROUND:
The precise relation of intestinal gas to symptoms, particularly abdominal bloating and distension remains incompletely elucidated. Our aim was to define the normal values of intestinal gas volume and distribution and to identify abnormalities in relation to functional-type symptoms.
METHODS:
Abdominal computed tomography scans were evaluated in healthy subjects (n = 37) and in patients in three conditions: basal (when they were feeling well; n = 88), during an episode of abdominal distension (n = 82) and after a challenge diet (n = 24). Intestinal gas content and distribution were measured by an original analysis program. Identification of patients outside the normal range was performed by machine learning techniques (one-class classifier). Results are expressed as median (IQR) or mean ± SE, as appropriate.
KEY RESULTS:
In healthy subjects the gut contained 95 (71, 141) mL gas distributed along the entire lumen. No differences were detected between patients studied under asymptomatic basal conditions and healthy subjects. However, either during a spontaneous bloating episode or once challenged with a flatulogenic diet, luminal gas was found to be increased and/or abnormally distributed in about one-fourth of the patients. These patients detected outside the normal range by the classifier exhibited a significantly greater number of abnormal features than those within the normal range (3.7 ± 0.4 vs 0.4 ± 0.1; p < 0.001).
CONCLUSIONS & INFERENCES:
The analysis of a large cohort of subjects using original techniques provides unique and heretofore unavailable information on the volume and distribution of intestinal gas in normal conditions and in relation to functional gastrointestinal symptoms.
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Sophie Wuerger, Kaida Xiao, Chenyang Fu, & Dimosthenis Karatzas. (2010). Colour-opponent mechanisms are not affected by age-related chromatic sensitivity changes. OPO - Ophthalmic and Physiological Optics, 30(5), 635–659.
Abstract: The purpose of this study was to assess whether age-related chromatic sensitivity changes are associated with corresponding changes in hue perception in a large sample of colour-normal observers over a wide age range (n = 185; age range: 18-75 years). In these observers we determined both the sensitivity along the protan, deutan and tritan line; and settings for the four unique hues, from which the characteristics of the higher-order colour mechanisms can be derived. We found a significant decrease in chromatic sensitivity due to ageing, in particular along the tritan line. From the unique hue settings we derived the cone weightings associated with the colour mechanisms that are at equilibrium for the four unique hues. We found that the relative cone weightings (w(L) /w(M) and w(L) /w(S)) associated with the unique hues were independent of age. Our results are consistent with previous findings that the unique hues are rather constant with age while chromatic sensitivity declines. They also provide evidence in favour of the hypothesis that higher-order colour mechanisms are equipped with flexible cone weightings, as opposed to fixed weights. The mechanism underlying this compensation is still poorly understood.
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Bhaskar Chakraborty, Andrew Bagdanov, Jordi Gonzalez, & Xavier Roca. (2013). Human Action Recognition Using an Ensemble of Body-Part Detectors. EXSY - Expert Systems, 30(2), 101–114.
Abstract: This paper describes an approach to human action recognition based on a probabilistic optimization model of body parts using hidden Markov model (HMM). Our method is able to distinguish between similar actions by only considering the body parts having major contribution to the actions, for example, legs for walking, jogging and running; arms for boxing, waving and clapping. We apply HMMs to model the stochastic movement of the body parts for action recognition. The HMM construction uses an ensemble of body-part detectors, followed by grouping of part detections, to perform human identification. Three example-based body-part detectors are trained to detect three components of the human body: the head, legs and arms. These detectors cope with viewpoint changes and self-occlusions through the use of ten sub-classifiers that detect body parts over a specific range of viewpoints. Each sub-classifier is a support vector machine trained on features selected for the discriminative power for each particular part/viewpoint combination. Grouping of these detections is performed using a simple geometric constraint model that yields a viewpoint-invariant human detector. We test our approach on three publicly available action datasets: the KTH dataset, Weizmann dataset and HumanEva dataset. Our results illustrate that with a simple and compact representation we can achieve robust recognition of human actions comparable to the most complex, state-of-the-art methods.
Keywords: Human action recognition;body-part detection;hidden Markov model
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Sergio Escalera, Ana Puig, Oscar Amoros, & Maria Salamo. (2011). Intelligent GPGPU Classification in Volume Visualization: a framework based on Error-Correcting Output Codes. CGF - Computer Graphics Forum, 30(7), 2107–2115.
Abstract: IF JCR 1.455 2010 25/99
In volume visualization, the definition of the regions of interest is inherently an iterative trial-and-error process finding out the best parameters to classify and render the final image. Generally, the user requires a lot of expertise to analyze and edit these parameters through multi-dimensional transfer functions. In this paper, we present a framework of intelligent methods to label on-demand multiple regions of interest. These methods can be split into a two-level GPU-based labelling algorithm that computes in time of rendering a set of labelled structures using the Machine Learning Error-Correcting Output Codes (ECOC) framework. In a pre-processing step, ECOC trains a set of Adaboost binary classifiers from a reduced pre-labelled data set. Then, at the testing stage, each classifier is independently applied on the features of a set of unlabelled samples and combined to perform multi-class labelling. We also propose an alternative representation of these classifiers that allows to highly parallelize the testing stage. To exploit that parallelism we implemented the testing stage in GPU-OpenCL. The empirical results on different data sets for several volume structures shows high computational performance and classification accuracy.
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