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Iban Berganzo-Besga, Hector A. Orengo, Felipe Lumbreras, Paloma Aliende, & Monica N. Ramsey. (2022). Automated detection and classification of multi-cell Phytoliths using Deep Learning-Based Algorithms. JArchSci - Journal of Archaeological Science, 148, 105654.
Abstract: This paper presents an algorithm for automated detection and classification of multi-cell phytoliths, one of the major components of many archaeological and paleoenvironmental deposits. This identification, based on phytolith wave pattern, is made using a pretrained VGG19 deep learning model. This approach has been tested in three key phytolith genera for the study of agricultural origins in Near East archaeology: Avena, Hordeum and Triticum. Also, this classification has been validated at species-level using Triticum boeoticum and dicoccoides images. Due to the diversity of microscopes, cameras and chemical treatments that can influence images of phytolith slides, three types of data augmentation techniques have been implemented: rotation of the images at 45-degree angles, random colour and brightness jittering, and random blur/sharpen. The implemented workflow has resulted in an overall accuracy of 93.68% for phytolith genera, improving previous attempts. The algorithm has also demonstrated its potential to automatize the classification of phytoliths species with an overall accuracy of 100%. The open code and platforms employed to develop the algorithm assure the method's accessibility, reproducibility and reusability.
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Sonia Baeza, Debora Gil, I.Garcia Olive, M.Salcedo, J.Deportos, Carles Sanchez, et al. (2022). A novel intelligent radiomic analysis of perfusion SPECT/CT images to optimize pulmonary embolism diagnosis in COVID-19 patients. EJNMMI-PHYS - EJNMMI Physics, 9(1, Article 84), 1–17.
Abstract: Background: COVID-19 infection, especially in cases with pneumonia, is associated with a high rate of pulmonary embolism (PE). In patients with contraindications for CT pulmonary angiography (CTPA) or non-diagnostic CTPA, perfusion single-photon emission computed tomography/computed tomography (Q-SPECT/CT) is a diagnostic alternative. The goal of this study is to develop a radiomic diagnostic system to detect PE based only on the analysis of Q-SPECT/CT scans.
Methods: This radiomic diagnostic system is based on a local analysis of Q-SPECT/CT volumes that includes both CT and Q-SPECT values for each volume point. We present a combined approach that uses radiomic features extracted from each scan as input into a fully connected classifcation neural network that optimizes a weighted crossentropy loss trained to discriminate between three diferent types of image patterns (pixel sample level): healthy lungs (control group), PE and pneumonia. Four types of models using diferent confguration of parameters were tested.
Results: The proposed radiomic diagnostic system was trained on 20 patients (4,927 sets of samples of three types of image patterns) and validated in a group of 39 patients (4,410 sets of samples of three types of image patterns). In the training group, COVID-19 infection corresponded to 45% of the cases and 51.28% in the test group. In the test group, the best model for determining diferent types of image patterns with PE presented a sensitivity, specifcity, positive predictive value and negative predictive value of 75.1%, 98.2%, 88.9% and 95.4%, respectively. The best model for detecting
pneumonia presented a sensitivity, specifcity, positive predictive value and negative predictive value of 94.1%, 93.6%, 85.2% and 97.6%, respectively. The area under the curve (AUC) was 0.92 for PE and 0.91 for pneumonia. When the results obtained at the pixel sample level are aggregated into regions of interest, the sensitivity of the PE increases to 85%, and all metrics improve for pneumonia.
Conclusion: This radiomic diagnostic system was able to identify the diferent lung imaging patterns and is a frst step toward a comprehensive intelligent radiomic system to optimize the diagnosis of PE by Q-SPECT/CT.
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David Castells, Vinh Ngo, Juan Borrego-Carazo, Marc Codina, Carles Sanchez, Debora Gil, et al. (2022). A Survey of FPGA-Based Vision Systems for Autonomous Cars. ACESS - IEEE Access, 10, 132525–132563.
Abstract: On the road to making self-driving cars a reality, academic and industrial researchers are working hard to continue to increase safety while meeting technical and regulatory constraints Understanding the surrounding environment is a fundamental task in self-driving cars. It requires combining complex computer vision algorithms. Although state-of-the-art algorithms achieve good accuracy, their implementations often require powerful computing platforms with high power consumption. In some cases, the processing speed does not meet real-time constraints. FPGA platforms are often used to implement a category of latency-critical algorithms that demand maximum performance and energy efficiency. Since self-driving car computer vision functions fall into this category, one could expect to see a wide adoption of FPGAs in autonomous cars. In this paper, we survey the computer vision FPGA-based works from the literature targeting automotive applications over the last decade. Based on the survey, we identify the strengths and weaknesses of FPGAs in this domain and future research opportunities and challenges.
Keywords: Autonomous automobile; Computer vision; field programmable gate arrays; reconfigurable architectures
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Saad Minhas, Zeba Khanam, Shoaib Ehsan, Klaus McDonald Maier, & Aura Hernandez-Sabate. (2022). Weather Classification by Utilizing Synthetic Data. SENS - Sensors, 22(9), 3193.
Abstract: Weather prediction from real-world images can be termed a complex task when targeting classification using neural networks. Moreover, the number of images throughout the available datasets can contain a huge amount of variance when comparing locations with the weather those images are representing. In this article, the capabilities of a custom built driver simulator are explored specifically to simulate a wide range of weather conditions. Moreover, the performance of a new synthetic dataset generated by the above simulator is also assessed. The results indicate that the use of synthetic datasets in conjunction with real-world datasets can increase the training efficiency of the CNNs by as much as 74%. The article paves a way forward to tackle the persistent problem of bias in vision-based datasets.
Keywords: Weather classification; synthetic data; dataset; autonomous car; computer vision; advanced driver assistance systems; deep learning; intelligent transportation systems
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Eduardo Aguilar, Bhalaji Nagarajan, Beatriz Remeseiro, & Petia Radeva. (2022). Bayesian deep learning for semantic segmentation of food images. CEE - Computers and Electrical Engineering, 103, 108380.
Abstract: Deep learning has provided promising results in various applications; however, algorithms tend to be overconfident in their predictions, even though they may be entirely wrong. Particularly for critical applications, the model should provide answers only when it is very sure of them. This article presents a Bayesian version of two different state-of-the-art semantic segmentation methods to perform multi-class segmentation of foods and estimate the uncertainty about the given predictions. The proposed methods were evaluated on three public pixel-annotated food datasets. As a result, we can conclude that Bayesian methods improve the performance achieved by the baseline architectures and, in addition, provide information to improve decision-making. Furthermore, based on the extracted uncertainty map, we proposed three measures to rank the images according to the degree of noisy annotations they contained. Note that the top 135 images ranked by one of these measures include more than half of the worst-labeled food images.
Keywords: Deep learning; Uncertainty quantification; Bayesian inference; Image segmentation; Food analysis
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Zhen Xu, Sergio Escalera, Adrien Pavao, Magali Richard, Wei-Wei Tu, Quanming Yao, et al. (2022). Codabench: Flexible, easy-to-use, and reproducible meta-benchmark platform. PATTERNS - Patterns, 3(7), 100543.
Abstract: Obtaining a standardized benchmark of computational methods is a major issue in data-science communities. Dedicated frameworks enabling fair benchmarking in a unified environment are yet to be developed. Here, we introduce Codabench, a meta-benchmark platform that is open sourced and community driven for benchmarking algorithms or software agents versus datasets or tasks. A public instance of Codabench is open to everyone free of charge and allows benchmark organizers to fairly compare submissions under the same setting (software, hardware, data, algorithms), with custom protocols and data formats. Codabench has unique features facilitating easy organization of flexible and reproducible benchmarks, such as the possibility of reusing templates of benchmarks and supplying compute resources on demand. Codabench has been used internally and externally on various applications, receiving more than 130 users and 2,500 submissions. As illustrative use cases, we introduce four diverse benchmarks covering graph machine learning, cancer heterogeneity, clinical diagnosis, and reinforcement learning.
Keywords: Machine learning; data science; benchmark platform; reproducibility; competitions
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Ajian Liu, Chenxu Zhao, Zitong Yu, Jun Wan, Anyang Su, Xing Liu, et al. (2022). Contrastive Context-Aware Learning for 3D High-Fidelity Mask Face Presentation Attack Detection. TIForensicSEC - IEEE Transactions on Information Forensics and Security, 17, 2497–2507.
Abstract: Face presentation attack detection (PAD) is essential to secure face recognition systems primarily from high-fidelity mask attacks. Most existing 3D mask PAD benchmarks suffer from several drawbacks: 1) a limited number of mask identities, types of sensors, and a total number of videos; 2) low-fidelity quality of facial masks. Basic deep models and remote photoplethysmography (rPPG) methods achieved acceptable performance on these benchmarks but still far from the needs of practical scenarios. To bridge the gap to real-world applications, we introduce a large-scale Hi gh- Fi delity Mask dataset, namely HiFiMask . Specifically, a total amount of 54,600 videos are recorded from 75 subjects with 225 realistic masks by 7 new kinds of sensors. Along with the dataset, we propose a novel C ontrastive C ontext-aware L earning (CCL) framework. CCL is a new training methodology for supervised PAD tasks, which is able to learn by leveraging rich contexts accurately (e.g., subjects, mask material and lighting) among pairs of live faces and high-fidelity mask attacks. Extensive experimental evaluations on HiFiMask and three additional 3D mask datasets demonstrate the effectiveness of our method. The codes and dataset will be released soon.
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Hugo Bertiche, Meysam Madadi, & Sergio Escalera. (2022). Neural Cloth Simulation. ACMTGraph - ACM Transactions on Graphics, 41(6), 1–14.
Abstract: We present a general framework for the garment animation problem through unsupervised deep learning inspired in physically based simulation. Existing trends in the literature already explore this possibility. Nonetheless, these approaches do not handle cloth dynamics. Here, we propose the first methodology able to learn realistic cloth dynamics unsupervisedly, and henceforth, a general formulation for neural cloth simulation. The key to achieve this is to adapt an existing optimization scheme for motion from simulation based methodologies to deep learning. Then, analyzing the nature of the problem, we devise an architecture able to automatically disentangle static and dynamic cloth subspaces by design. We will show how this improves model performance. Additionally, this opens the possibility of a novel motion augmentation technique that greatly improves generalization. Finally, we show it also allows to control the level of motion in the predictions. This is a useful, never seen before, tool for artists. We provide of detailed analysis of the problem to establish the bases of neural cloth simulation and guide future research into the specifics of this domain.
ACM Transactions on GraphicsVolume 41Issue 6December 2022 Article No.: 220pp 1–
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Joakim Bruslund Haurum, Meysam Madadi, Sergio Escalera, & Thomas B. Moeslund. (2022). Multi-scale hybrid vision transformer and Sinkhorn tokenizer for sewer defect classification. AC - Automation in Construction, 144, 104614.
Abstract: A crucial part of image classification consists of capturing non-local spatial semantics of image content. This paper describes the multi-scale hybrid vision transformer (MSHViT), an extension of the classical convolutional neural network (CNN) backbone, for multi-label sewer defect classification. To better model spatial semantics in the images, features are aggregated at different scales non-locally through the use of a lightweight vision transformer, and a smaller set of tokens was produced through a novel Sinkhorn clustering-based tokenizer using distinct cluster centers. The proposed MSHViT and Sinkhorn tokenizer were evaluated on the Sewer-ML multi-label sewer defect classification dataset, showing consistent performance improvements of up to 2.53 percentage points.
Keywords: Sewer Defect Classification; Vision Transformers; Sinkhorn-Knopp; Convolutional Neural Networks; Closed-Circuit Television; Sewer Inspection
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Juan Borrego-Carazo, Carles Sanchez, David Castells, Jordi Carrabina, & Debora Gil. (2022). A benchmark for the evaluation of computational methods for bronchoscopic navigation. IJCARS - International Journal of Computer Assisted Radiology and Surgery, 17(1).
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Antoni Rosell, Sonia Baeza, S. Garcia-Reina, JL. Mate, Ignasi Guasch, I. Nogueira, et al. (2022). EP01.05-001 Radiomics to Increase the Effectiveness of Lung Cancer Screening Programs. Radiolung Preliminary Results. JTO - Journal of Thoracic Oncology, 17(9), S182.
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Antoni Rosell, Sonia Baeza, S. Garcia-Reina, JL. Mate, Ignasi Guasch, I. Nogueira, et al. (2022). Radiomics to increase the effectiveness of lung cancer screening programs. Radiolung preliminary results. ERJ - European Respiratory Journal, 60(66).
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Razieh Rastgoo, Kourosh Kiani, & Sergio Escalera. (2022). Real-time Isolated Hand Sign Language RecognitioN Using Deep Networks and SVD. Journal of Ambient Intelligence and Humanized Computing, 591–611.
Abstract: One of the challenges in computer vision models, especially sign language, is real-time recognition. In this work, we present a simple yet low-complex and efficient model, comprising single shot detector, 2D convolutional neural network, singular value decomposition (SVD), and long short term memory, to real-time isolated hand sign language recognition (IHSLR) from RGB video. We employ the SVD method as an efficient, compact, and discriminative feature extractor from the estimated 3D hand keypoints coordinators. Despite the previous works that employ the estimated 3D hand keypoints coordinates as raw features, we propose a novel and revolutionary way to apply the SVD to the estimated 3D hand keypoints coordinates to get more discriminative features. SVD method is also applied to the geometric relations between the consecutive segments of each finger in each hand and also the angles between these sections. We perform a detailed analysis of recognition time and accuracy. One of our contributions is that this is the first time that the SVD method is applied to the hand pose parameters. Results on four datasets, RKS-PERSIANSIGN (99.5±0.04), First-Person (91±0.06), ASVID (93±0.05), and isoGD (86.1±0.04), confirm the efficiency of our method in both accuracy (mean+std) and time recognition. Furthermore, our model outperforms or gets competitive results with the state-of-the-art alternatives in IHSLR and hand action recognition.
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Joana Maria Pujadas-Mora, Alicia Fornes, Oriol Ramos Terrades, Josep Llados, Jialuo Chen, Miquel Valls-Figols, et al. (2022). The Barcelona Historical Marriage Database and the Baix Llobregat Demographic Database. From Algorithms for Handwriting Recognition to Individual-Level Demographic and Socioeconomic Data. HLCS - Historical Life Course Studies, 99–132.
Abstract: The Barcelona Historical Marriage Database (BHMD) gathers records of the more than 600,000 marriages celebrated in the Diocese of Barcelona and their taxation registered in Barcelona Cathedral's so-called Marriage Licenses Books for the long period 1451–1905 and the BALL Demographic Database brings together the individual information recorded in the population registers, censuses and fiscal censuses of the main municipalities of the county of Baix Llobregat (Barcelona). In this ongoing collection 263,786 individual observations have been assembled, dating from the period between 1828 and 1965 by December 2020. The two databases started as part of different interdisciplinary research projects at the crossroads of Historical Demography and Computer Vision. Their construction uses artificial intelligence and computer vision methods as Handwriting Recognition to reduce the time of execution. However, its current state still requires some human intervention which explains the implemented crowdsourcing and game sourcing experiences. Moreover, knowledge graph techniques have allowed the application of advanced record linkage to link the same individuals and families across time and space. Moreover, we will discuss the main research lines using both databases developed so far in historical demography.
Keywords: Individual demographic databases; Computer vision, Record linkage; Social mobility; Inequality; Migration; Word spotting; Handwriting recognition; Local censuses; Marriage Licences
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Giacomo Magnifico, Beata Megyesi, Mohamed Ali Souibgui, Jialuo Chen, & Alicia Fornes. (2022). Lost in Transcription of Graphic Signs in Ciphers. In International Conference on Historical Cryptology (HistoCrypt 2022) (pp. 153–158).
Abstract: Hand-written Text Recognition techniques with the aim to automatically identify and transcribe hand-written text have been applied to historical sources including ciphers. In this paper, we compare the performance of two machine learning architectures, an unsupervised method based on clustering and a deep learning method with few-shot learning. Both models are tested on seen and unseen data from historical ciphers with different symbol sets consisting of various types of graphic signs. We compare the models and highlight their differences in performance, with their advantages and shortcomings.
Keywords: transcription of ciphers; hand-written text recognition of symbols; graphic signs
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