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Mariella Dimiccoli, Benoît Girard, Alain Berthoz, & Daniel Bennequin. (2013). Striola Magica: a functional explanation of otolith organs. JCN - Journal of Computational Neuroscience, 35(2), 125–154.
Abstract: Otolith end organs of vertebrates sense linear accelerations of the head and gravitation. The hair cells on their epithelia are responsible for transduction. In mammals, the striola, parallel to the line where hair cells reverse their polarization, is a narrow region centered on a curve with curvature and torsion. It has been shown that the striolar region is functionally different from the rest, being involved in a phasic vestibular pathway. We propose a mathematical and computational model that explains the necessity of this amazing geometry for the striola to be able to carry out its function. Our hypothesis, related to the biophysics of the hair cells and to the physiology of their afferent neurons, is that striolar afferents collect information from several type I hair cells to detect the jerk in a large domain of acceleration directions. This predicts a mean number of two calyces for afferent neurons, as measured in rodents. The domain of acceleration directions sensed by our striolar model is compatible with the experimental results obtained on monkeys considering all afferents. Therefore, the main result of our study is that phasic and tonic vestibular afferents cover the same geometrical fields, but at different dynamical and frequency domains.
Keywords: Otolith organs ;Striola; Vestibular pathway
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Anjan Dutta, & Hichem Sahbi. (2018). Stochastic Graphlet Embedding. TNNLS - IEEE Transactions on Neural Networks and Learning Systems, , 1–14.
Abstract: Graph-based methods are known to be successful in many machine learning and pattern classification tasks. These methods consider semi-structured data as graphs where nodes correspond to primitives (parts, interest points, segments,
etc.) and edges characterize the relationships between these primitives. However, these non-vectorial graph data cannot be straightforwardly plugged into off-the-shelf machine learning algorithms without a preliminary step of – explicit/implicit –graph vectorization and embedding. This embedding process
should be resilient to intra-class graph variations while being highly discriminant. In this paper, we propose a novel high-order stochastic graphlet embedding (SGE) that maps graphs into vector spaces. Our main contribution includes a new stochastic search procedure that efficiently parses a given graph and extracts/samples unlimitedly high-order graphlets. We consider
these graphlets, with increasing orders, to model local primitives as well as their increasingly complex interactions. In order to build our graph representation, we measure the distribution of these graphlets into a given graph, using particular hash functions that efficiently assign sampled graphlets into isomorphic sets with a very low probability of collision. When
combined with maximum margin classifiers, these graphlet-based representations have positive impact on the performance of pattern comparison and recognition as corroborated through extensive experiments using standard benchmark databases.
Keywords: Stochastic graphlets; Graph embedding; Graph classification; Graph hashing; Betweenness centrality
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Debora Gil, Aura Hernandez-Sabate, Oriol Rodriguez, J. Mauri, & Petia Radeva. (2006). Statistical Strategy for Anisotropic Adventitia Modelling in IVUS. IEEE Transactions on Medical Imaging, 25(6), 768–778.
Abstract: Vessel plaque assessment by analysis of intravascular ultrasound sequences is a useful tool for cardiac disease diagnosis and intervention. Manual detection of luminal (inner) and mediaadventitia (external) vessel borders is the main activity of physicians in the process of lumen narrowing (plaque) quantification. Difficult definition of vessel border descriptors, as well as, shades, artifacts, and blurred signal response due to ultrasound physical properties trouble automated adventitia segmentation. In order to efficiently approach such a complex problem, we propose blending advanced anisotropic filtering operators and statistical classification techniques into a vessel border modelling strategy. Our systematic statistical analysis shows that the reported adventitia detection achieves an accuracy in the range of interobserver variability regardless of plaque nature, vessel geometry, and incomplete vessel borders. Index Terms–-Anisotropic processing, intravascular ultrasound (IVUS), vessel border segmentation, vessel structure classification.
Keywords: Corners; T-junctions; Wavelets
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Lluis Pere de las Heras, Ahmed Sheraz, Marcus Liwicki, Ernest Valveny, & Gemma Sanchez. (2014). Statistical Segmentation and Structural Recognition for Floor Plan Interpretation. IJDAR - International Journal on Document Analysis and Recognition, 17(3), 221–237.
Abstract: A generic method for floor plan analysis and interpretation is presented in this article. The method, which is mainly inspired by the way engineers draw and interpret floor plans, applies two recognition steps in a bottom-up manner. First, basic building blocks, i.e., walls, doors, and windows are detected using a statistical patch-based segmentation approach. Second, a graph is generated, and structural pattern recognition techniques are applied to further locate the main entities, i.e., rooms of the building. The proposed approach is able to analyze any type of floor plan regardless of the notation used. We have evaluated our method on different publicly available datasets of real architectural floor plans with different notations. The overall detection and recognition accuracy is about 95 %, which is significantly better than any other state-of-the-art method. Our approach is generic enough such that it could be easily adopted to the recognition and interpretation of any other printed machine-generated structured documents.
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Thomas B. Moeslund, Sergio Escalera, Gholamreza Anbarjafari, Kamal Nasrollahi, & Jun Wan. (2020). Statistical Machine Learning for Human Behaviour Analysis. ENTROPY - Entropy, 25(5), 530.
Keywords: action recognition; emotion recognition; privacy-aware
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Frederic Sampedro, Anna Domenech, & Sergio Escalera. (2014). Static and dynamic computational cancer spread quantification in whole body FDG-PET/CT scans. JMIHI - Journal of Medical Imaging and Health Informatics, 4(6), 825–831.
Abstract: In this work we address the computational cancer spread quantification scenario in whole body FDG-PET/CT scans. At the static level, this setting can be modeled as a clustering problem on the set of 3D connected components of the whole body PET tumoral segmentation mask carried out by nuclear medicine physicians. At the dynamic level, and ad-hoc algorithm is proposed in order to quantify the cancer spread time evolution which, when combined with other existing indicators, gives rise to the metabolic tumor volume-aggressiveness-spread time evolution chart, a novel tool that we claim that would prove useful in nuclear medicine and oncological clinical or research scenarios. Good performance results of the proposed methodologies both at the clinical and technological level are shown using a dataset of 48 segmented whole body FDG-PET/CT scans.
Keywords: CANCER SPREAD; COMPUTER AIDED DIAGNOSIS; MEDICAL IMAGING; TUMOR QUANTIFICATION
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Simone Balocco, Carlo Gatta, Francesco Ciompi, A. Wahle, Petia Radeva, S. Carlier, et al. (2014). Standardized evaluation methodology and reference database for evaluating IVUS image segmentation. CMIG - Computerized Medical Imaging and Graphics, 38(2), 70–90.
Abstract: This paper describes an evaluation framework that allows a standardized and quantitative comparison of IVUS lumen and media segmentation algorithms. This framework has been introduced at the MICCAI 2011 Computing and Visualization for (Intra)Vascular Imaging (CVII) workshop, comparing the results of eight teams that participated.
We describe the available data-base comprising of multi-center, multi-vendor and multi-frequency IVUS datasets, their acquisition, the creation of the reference standard and the evaluation measures. The approaches address segmentation of the lumen, the media, or both borders; semi- or fully-automatic operation; and 2-D vs. 3-D methodology. Three performance measures for quantitative analysis have
been proposed. The results of the evaluation indicate that segmentation of the vessel lumen and media is possible with an accuracy that is comparable to manual annotation when semi-automatic methods are used, as well as encouraging results can be obtained also in case of fully-automatic segmentation. The analysis performed in this paper also highlights the challenges in IVUS segmentation that remains to be
solved.
Keywords: IVUS (intravascular ultrasound); Evaluation framework; Algorithm comparison; Image segmentation
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Carlo Gatta, & Francesco Ciompi. (2014). Stacked Sequential Scale-Space Taylor Context. TPAMI - IEEE Transactions on Pattern Analysis and Machine Intelligence, 36(8), 1694–1700.
Abstract: We analyze sequential image labeling methods that sample the posterior label field in order to gather contextual information. We propose an effective method that extracts local Taylor coefficients from the posterior at different scales. Results show that our proposal outperforms state-of-the-art methods on MSRC-21, CAMVID, eTRIMS8 and KAIST2 data sets.
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Javier Marin, & Sergio Escalera. (2021). SSSGAN: Satellite Style and Structure Generative Adversarial Networks. Remote Sensing, 13(19), 3984.
Abstract: This work presents Satellite Style and Structure Generative Adversarial Network (SSGAN), a generative model of high resolution satellite imagery to support image segmentation. Based on spatially adaptive denormalization modules (SPADE) that modulate the activations with respect to segmentation map structure, in addition to global descriptor vectors that capture the semantic information in a vector with respect to Open Street Maps (OSM) classes, this model is able to produce
consistent aerial imagery. By decoupling the generation of aerial images into a structure map and a carefully defined style vector, we were able to improve the realism and geodiversity of the synthesis with respect to the state-of-the-art baseline. Therefore, the proposed model allows us to control the generation not only with respect to the desired structure, but also with respect to a geographic area.
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Angel Morera, Angel Sanchez, A. Belen Moreno, Angel Sappa, & Jose F. Velez. (2020). SSD vs. YOLO for Detection of Outdoor Urban Advertising Panels under Multiple Variabilities. SENS - Sensors, 20(16), 4587.
Abstract: This work compares Single Shot MultiBox Detector (SSD) and You Only Look Once (YOLO) deep neural networks for the outdoor advertisement panel detection problem by handling multiple and combined variabilities in the scenes. Publicity panel detection in images offers important advantages both in the real world as well as in the virtual one. For example, applications like Google Street View can be used for Internet publicity and when detecting these ads panels in images, it could be possible to replace the publicity appearing inside the panels by another from a funding company. In our experiments, both SSD and YOLO detectors have produced acceptable results under variable sizes of panels, illumination conditions, viewing perspectives, partial occlusion of panels, complex background and multiple panels in scenes. Due to the difficulty of finding annotated images for the considered problem, we created our own dataset for conducting the experiments. The major strength of the SSD model was the almost elimination of False Positive (FP) cases, situation that is preferable when the publicity contained inside the panel is analyzed after detecting them. On the other side, YOLO produced better panel localization results detecting a higher number of True Positive (TP) panels with a higher accuracy. Finally, a comparison of the two analyzed object detection models with different types of semantic segmentation networks and using the same evaluation metrics is also included.
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Armin Mehri, Parichehr Behjati, Dario Carpio, & Angel Sappa. (2023). SRFormer: Efficient Yet Powerful Transformer Network for Single Image Super Resolution. ACCESS - IEEE Access, 11.
Abstract: Recent breakthroughs in single image super resolution have investigated the potential of deep Convolutional Neural Networks (CNNs) to improve performance. However, CNNs based models suffer from their limited fields and their inability to adapt to the input content. Recently, Transformer based models were presented, which demonstrated major performance gains in Natural Language Processing and Vision tasks while mitigating the drawbacks of CNNs. Nevertheless, Transformer computational complexity can increase quadratically for high-resolution images, and the fact that it ignores the original structures of the image by converting them to the 1D structure can make it problematic to capture the local context information and adapt it for real-time applications. In this paper, we present, SRFormer, an efficient yet powerful Transformer-based architecture, by making several key designs in the building of Transformer blocks and Transformer layers that allow us to consider the original structure of the image (i.e., 2D structure) while capturing both local and global dependencies without raising computational demands or memory consumption. We also present a Gated Multi-Layer Perceptron (MLP) Feature Fusion module to aggregate the features of different stages of Transformer blocks by focusing on inter-spatial relationships while adding minor computational costs to the network. We have conducted extensive experiments on several super-resolution benchmark datasets to evaluate our approach. SRFormer demonstrates superior performance compared to state-of-the-art methods from both Transformer and Convolutional networks, with an improvement margin of 0.1∼0.53dB . Furthermore, while SRFormer has almost the same model size, it outperforms SwinIR by 0.47% and inference time by half the time of SwinIR. The code will be available on GitHub.
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Simone Balocco, Carlo Gatta, Oriol Pujol, J. Mauri, & Petia Radeva. (2010). SRBF: Speckle Reducing Bilateral Filtering. UMB - Ultrasound in Medicine and Biology, 36(8), 1353–1363.
Abstract: Speckle noise negatively affects medical ultrasound image shape interpretation and boundary detection. Speckle removal filters are widely used to selectively remove speckle noise without destroying important image features to enhance object boundaries. In this article, a fully automatic bilateral filter tailored to ultrasound images is proposed. The edge preservation property is obtained by embedding noise statistics in the filter framework. Consequently, the filter is able to tackle the multiplicative behavior modulating the smoothing strength with respect to local statistics. The in silico experiments clearly showed that the speckle reducing bilateral filter (SRBF) has superior performances to most of the state of the art filtering methods. The filter is tested on 50 in vivo US images and its influence on a segmentation task is quantified. The results using SRBF filtered data sets show a superior performance to using oriented anisotropic diffusion filtered images. This improvement is due to the adaptive support of SRBF and the embedded noise statistics, yielding a more homogeneous smoothing. SRBF results in a fully automatic, fast and flexible algorithm potentially suitable in wide ranges of speckle noise sizes, for different medical applications (IVUS, B-mode, 3-D matrix array US).
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Mariella Dimiccoli, Marc Bolaños, Estefania Talavera, Maedeh Aghaei, Stavri G. Nikolov, & Petia Radeva. (2017). SR-Clustering: Semantic Regularized Clustering for Egocentric Photo Streams Segmentation. CVIU - Computer Vision and Image Understanding, 155, 55–69.
Abstract: While wearable cameras are becoming increasingly popular, locating relevant information in large unstructured collections of egocentric images is still a tedious and time consuming processes. This paper addresses the problem of organizing egocentric photo streams acquired by a wearable camera into semantically meaningful segments. First, contextual and semantic information is extracted for each image by employing a Convolutional Neural Networks approach. Later, by integrating language processing, a vocabulary of concepts is defined in a semantic space. Finally, by exploiting the temporal coherence in photo streams, images which share contextual and semantic attributes are grouped together. The resulting temporal segmentation is particularly suited for further analysis, ranging from activity and event recognition to semantic indexing and summarization. Experiments over egocentric sets of nearly 17,000 images, show that the proposed approach outperforms state-of-the-art methods.
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Oscar Lopes, Miguel Reyes, Sergio Escalera, & Jordi Gonzalez. (2014). Spherical Blurred Shape Model for 3-D Object and Pose Recognition: Quantitative Analysis and HCI Applications in Smart Environments. TSMCB - IEEE Transactions on Systems, Man and Cybernetics (Part B), 44(12), 2379–2390.
Abstract: The use of depth maps is of increasing interest after the advent of cheap multisensor devices based on structured light, such as Kinect. In this context, there is a strong need of powerful 3-D shape descriptors able to generate rich object representations. Although several 3-D descriptors have been already proposed in the literature, the research of discriminative and computationally efficient descriptors is still an open issue. In this paper, we propose a novel point cloud descriptor called spherical blurred shape model (SBSM) that successfully encodes the structure density and local variabilities of an object based on shape voxel distances and a neighborhood propagation strategy. The proposed SBSM is proven to be rotation and scale invariant, robust to noise and occlusions, highly discriminative for multiple categories of complex objects like the human hand, and computationally efficient since the SBSM complexity is linear to the number of object voxels. Experimental evaluation in public depth multiclass object data, 3-D facial expressions data, and a novel hand poses data sets show significant performance improvements in relation to state-of-the-art approaches. Moreover, the effectiveness of the proposal is also proved for object spotting in 3-D scenes and for real-time automatic hand pose recognition in human computer interaction scenarios.
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Naveen Onkarappa, & Angel Sappa. (2014). Speed and Texture: An Empirical Study on Optical-Flow Accuracy in ADAS Scenarios. TITS - IEEE Transactions on Intelligent Transportation Systems, 15(1), 136–147.
Abstract: IF: 3.064
Increasing mobility in everyday life has led to the concern for the safety of automotives and human life. Computer vision has become a valuable tool for developing driver assistance applications that target such a concern. Many such vision-based assisting systems rely on motion estimation, where optical flow has shown its potential. A variational formulation of optical flow that achieves a dense flow field involves a data term and regularization terms. Depending on the image sequence, the regularization has to appropriately be weighted for better accuracy of the flow field. Because a vehicle can be driven in different kinds of environments, roads, and speeds, optical-flow estimation has to be accurately computed in all such scenarios. In this paper, we first present the polar representation of optical flow, which is quite suitable for driving scenarios due to the possibility that it offers to independently update regularization factors in different directional components. Then, we study the influence of vehicle speed and scene texture on optical-flow accuracy. Furthermore, we analyze the relationships of these specific characteristics on a driving scenario (vehicle speed and road texture) with the regularization weights in optical flow for better accuracy. As required by the work in this paper, we have generated several synthetic sequences along with ground-truth flow fields.
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