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Miguel Angel Bautista, Oriol Pujol, Xavier Baro, & Sergio Escalera. (2011). Introducing the Separability Matrix for Error Correcting Output Codes Coding. In Carlo Sansone, Josef Kittler, & Fabio Roli (Eds.), 10th International Conference on Multiple Classifier Systems (Vol. 6713, pp. 227–236). LNCS. Springer-Verlag Berlin, Heidelberg.
Abstract: Error Correcting Output Codes (ECOC) have demonstrate to be a powerful tool for treating multi-class problems. Nevertheless, predefined ECOC designs may not benefit from Error-correcting principles for particular multi-class data. In this paper, we introduce the Separability matrix as a tool to study and enhance designs for ECOC coding. In addition, a novel problem-dependent coding design based on the Separability matrix is tested over a wide set of challenging multi-class problems, obtaining very satisfactory results.
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David Guillamet, Jordi Vitria, & B. Shiele. (2003). Introducing a weighted non-negative matrix factorization for image classification. PRL - Pattern Recognition Letters, 24(14), 2447–2454.
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Jordi Vitria. (1996). Introduccio a la Morfologia Matematica.
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Shida Beigpour, Marc Serra, Joost Van de Weijer, Robert Benavente, Maria Vanrell, Olivier Penacchio, et al. (2013). Intrinsic Image Evaluation On Synthetic Complex Scenes. In 20th IEEE International Conference on Image Processing (pp. 285–289).
Abstract: Scene decomposition into its illuminant, shading, and reflectance intrinsic images is an essential step for scene understanding. Collecting intrinsic image groundtruth data is a laborious task. The assumptions on which the ground-truth
procedures are based limit their application to simple scenes with a single object taken in the absence of indirect lighting and interreflections. We investigate synthetic data for intrinsic image research since the extraction of ground truth is straightforward, and it allows for scenes in more realistic situations (e.g, multiple illuminants and interreflections). With this dataset we aim to motivate researchers to further explore intrinsic image decomposition in complex scenes.
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Sagnik Das, Hassan Ahmed Sial, Ke Ma, Ramon Baldrich, Maria Vanrell, & Dimitris Samaras. (2020). Intrinsic Decomposition of Document Images In-the-Wild. In 31st British Machine Vision Conference.
Abstract: Automatic document content processing is affected by artifacts caused by the shape
of the paper, non-uniform and diverse color of lighting conditions. Fully-supervised
methods on real data are impossible due to the large amount of data needed. Hence, the
current state of the art deep learning models are trained on fully or partially synthetic images. However, document shadow or shading removal results still suffer because: (a) prior methods rely on uniformity of local color statistics, which limit their application on real-scenarios with complex document shapes and textures and; (b) synthetic or hybrid datasets with non-realistic, simulated lighting conditions are used to train the models. In this paper we tackle these problems with our two main contributions. First, a physically constrained learning-based method that directly estimates document reflectance based on intrinsic image formation which generalizes to challenging illumination conditions. Second, a new dataset that clearly improves previous synthetic ones, by adding a large range of realistic shading and diverse multi-illuminant conditions, uniquely customized to deal with documents in-the-wild. The proposed architecture works in two steps. First, a white balancing module neutralizes the color of the illumination on the input image. Based on the proposed multi-illuminant dataset we achieve a good white-balancing in really difficult conditions. Second, the shading separation module accurately disentangles the shading and paper material in a self-supervised manner where only the synthetic texture is used as a weak training signal (obviating the need for very costly ground truth with disentangled versions of shading and reflectance). The proposed approach leads to significant generalization of document reflectance estimation in real scenes with challenging illumination. We extensively evaluate on the real benchmark datasets available for intrinsic image decomposition and document shadow removal tasks. Our reflectance estimation scheme, when used as a pre-processing step of an OCR pipeline, shows a 21% improvement of character error rate (CER), thus, proving the practical applicability. The data and code will be available at: https://github.com/cvlab-stonybrook/DocIIW.
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O. Rodriguez-Leor, E Fernandez-Nofrerias, J. Mauri, C. Garcia, R. Villuendas, V. Valle, et al. (2003). Intravascular ultrasound segmentation using local binary patterns. European Heart Journal (IF: 5.997), ESC Congress 2003.
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Oriol Pujol, Misael Rosales, Petia Radeva, & E Fernandez-Nofrerias. (2003). Intravascular Ultrasound Images Vessel Characterization using AdaBoost.
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Sergio Escalera, Oriol Pujol, J. Mauri, & Petia Radeva. (2009). Intravascular Ultrasound Tissue Characterization with Sub-class Error-Correcting Output Codes. Journal of Signal Processing Systems, 55(1-3), 35–47.
Abstract: Intravascular ultrasound (IVUS) represents a powerful imaging technique to explore coronary vessels and to study their morphology and histologic properties. In this paper, we characterize different tissues based on radial frequency, texture-based, and combined features. To deal with the classification of multiple tissues, we require the use of robust multi-class learning techniques. In this sense, error-correcting output codes (ECOC) show to robustly combine binary classifiers to solve multi-class problems. In this context, we propose a strategy to model multi-class classification tasks using sub-classes information in the ECOC framework. The new strategy splits the classes into different sub-sets according to the applied base classifier. Complex IVUS data sets containing overlapping data are learnt by splitting the original set of classes into sub-classes, and embedding the binary problems in a problem-dependent ECOC design. The method automatically characterizes different tissues, showing performance improvements over the state-of-the-art ECOC techniques for different base classifiers. Furthermore, the combination of RF and texture-based features also shows improvements over the state-of-the-art approaches.
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Debora Gil, Antonio Esteban Lansaque, Agnes Borras, Esmitt Ramirez, & Carles Sanchez. (2020). Intraoperative Extraction of Airways Anatomy in VideoBronchoscopy. ACCESS - IEEE Access, 8, 159696–159704.
Abstract: A main bottleneck in bronchoscopic biopsy sampling is to efficiently reach the lesion navigating across bronchial levels. Any guidance system should be able to localize the scope position during the intervention with minimal costs and alteration of clinical protocols. With the final goal of an affordable image-based guidance, this work presents a novel strategy to extract and codify the anatomical structure of bronchi, as well as, the scope navigation path from videobronchoscopy. Experiments using interventional data show that our method accurately identifies the bronchial structure. Meanwhile, experiments using simulated data verify that the extracted navigation path matches the 3D route.
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Simone Balocco, Francesco Ciompi, Juan Rigla, Xavier Carrillo, Josefina Mauri, & Petia Radeva. (2017). Intra-Coronary Stent localization In Intravascular Ultrasound Sequences, A Preliminary Study. In International workshop on Computing and Visualization for Intravascular Imaging and Computer Assisted Stenting (CVII-STENT). LNCS.
Abstract: An intraluminal coronary stent is a metal scaold deployed in a stenotic artery during Percutaneous Coronary Intervention (PCI).
Intravascular Ultrasound (IVUS) is a catheter-based imaging technique generally used for assessing the correct placement of the stent. All the approaches proposed so far for the stent analysis only focused on the struts detection, while this paper proposes a novel approach to detect the boundaries and the position of the stent along the pullback.
The pipeline of the method requires the identi cation of the stable frames
of the sequence and the reliable detection of stent struts. Using this data,
a measure of likelihood for a frame to contain a stent is computed. Then,
a robust binary representation of the presence of the stent in the pullback
is obtained applying an iterative and multi-scale approximation of the signal to symbols using the SAX algorithm. Results obtained comparing the automatic results versus the manual annotation of two observers on 80 IVUS in-vivo sequences shows that the method approaches the inter-observer variability scores.
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Fosca De Iorio, C. Malagelada, Fernando Azpiroz, M. Maluenda, C. Violanti, Laura Igual, et al. (2009). Intestinal motor activity, endoluminal motion and transit. NEUMOT - Neurogastroenterology & Motility, 21(12), 1264–e119.
Abstract: A programme for evaluation of intestinal motility has been recently developed based on endoluminal image analysis using computer vision methodology and machine learning techniques. Our aim was to determine the effect of intestinal muscle inhibition on wall motion, dynamics of luminal content and transit in the small bowel. Fourteen healthy subjects ingested the endoscopic capsule (Pillcam, Given Imaging) in fasting conditions. Seven of them received glucagon (4.8 microg kg(-1) bolus followed by a 9.6 microg kg(-1) h(-1) infusion during 1 h) and in the other seven, fasting activity was recorded, as controls. This dose of glucagon has previously shown to inhibit both tonic and phasic intestinal motor activity. Endoluminal image and displacement was analyzed by means of a computer vision programme specifically developed for the evaluation of muscular activity (contractile and non-contractile patterns), intestinal contents, endoluminal motion and transit. Thirty-minute periods before, during and after glucagon infusion were analyzed and compared with equivalent periods in controls. No differences were found in the parameters measured during the baseline (pretest) periods when comparing glucagon and control experiments. During glucagon infusion, there was a significant reduction in contractile activity (0.2 +/- 0.1 vs 4.2 +/- 0.9 luminal closures per min, P < 0.05; 0.4 +/- 0.1 vs 3.4 +/- 1.2% of images with radial wrinkles, P < 0.05) and a significant reduction of endoluminal motion (82 +/- 9 vs 21 +/- 10% of static images, P < 0.05). Endoluminal image analysis, by means of computer vision and machine learning techniques, can reliably detect reduced intestinal muscle activity and motion.
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Fernando Vilariño, Panagiota Spyridonos, Fosca De Iorio, Jordi Vitria, Fernando Azpiroz, & Petia Radeva. (2010). Intestinal Motility Assessment With Video Capsule Endoscopy: Automatic Annotation of Phasic Intestinal Contractions. TMI - IEEE Transactions on Medical Imaging, 29(2), 246–259.
Abstract: Intestinal motility assessment with video capsule endoscopy arises as a novel and challenging clinical fieldwork. This technique is based on the analysis of the patterns of intestinal contractions shown in a video provided by an ingestible capsule with a wireless micro-camera. The manual labeling of all the motility events requires large amount of time for offline screening in search of findings with low prevalence, which turns this procedure currently unpractical. In this paper, we propose a machine learning system to automatically detect the phasic intestinal contractions in video capsule endoscopy, driving a useful but not feasible clinical routine into a feasible clinical procedure. Our proposal is based on a sequential design which involves the analysis of textural, color, and blob features together with SVM classifiers. Our approach tackles the reduction of the imbalance rate of data and allows the inclusion of domain knowledge as new stages in the cascade. We present a detailed analysis, both in a quantitative and a qualitative way, by providing several measures of performance and the assessment study of interobserver variability. Our system performs at 70% of sensitivity for individual detection, whilst obtaining equivalent patterns to those of the experts for density of contractions.
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R.A.Bendezu, E.Barba, E.Burri, D.Cisternas, Carolina Malagelada, Santiago Segui, et al. (2015). Intestinal gas content and distribution in health and in patients with functional gut symptoms. NEUMOT - Neurogastroenterology & Motility, 27(9), 1249–1257.
Abstract: BACKGROUND:
The precise relation of intestinal gas to symptoms, particularly abdominal bloating and distension remains incompletely elucidated. Our aim was to define the normal values of intestinal gas volume and distribution and to identify abnormalities in relation to functional-type symptoms.
METHODS:
Abdominal computed tomography scans were evaluated in healthy subjects (n = 37) and in patients in three conditions: basal (when they were feeling well; n = 88), during an episode of abdominal distension (n = 82) and after a challenge diet (n = 24). Intestinal gas content and distribution were measured by an original analysis program. Identification of patients outside the normal range was performed by machine learning techniques (one-class classifier). Results are expressed as median (IQR) or mean ± SE, as appropriate.
KEY RESULTS:
In healthy subjects the gut contained 95 (71, 141) mL gas distributed along the entire lumen. No differences were detected between patients studied under asymptomatic basal conditions and healthy subjects. However, either during a spontaneous bloating episode or once challenged with a flatulogenic diet, luminal gas was found to be increased and/or abnormally distributed in about one-fourth of the patients. These patients detected outside the normal range by the classifier exhibited a significantly greater number of abnormal features than those within the normal range (3.7 ± 0.4 vs 0.4 ± 0.1; p < 0.001).
CONCLUSIONS & INFERENCES:
The analysis of a large cohort of subjects using original techniques provides unique and heretofore unavailable information on the volume and distribution of intestinal gas in normal conditions and in relation to functional gastrointestinal symptoms.
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Michal Drozdzal, Jordi Vitria, Santiago Segui, Carolina Malagelada, Fernando Azpiroz, & Petia Radeva. (2014). Intestinal event segmentation for endoluminal video analysis. In 21st IEEE International Conference on Image Processing (pp. 3592–3596).
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Carolina Malagelada, F.De Lorio, Fernando Azpiroz, Santiago Segui, Petia Radeva, Anna Accarino, et al. (2010). Intestinal Dysmotility in Patients with Functional Intestinal Disorders Demonstrated by Computer Vision Analysis of Capsule Endoscopy Images. In 18th United European Gastroenterology Week (Vol. 56, pp. A19–20).
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