|
Records |
Links |
|
Author |
Fernando Vilariño; Gerard Lacey; Jiang Zhou; Hugh Mulcahy; Stephen Patchett |
|
|
Title |
Automatic Labeling of Colonoscopy Video for Cancer Detection |
Type |
Conference Article |
|
Year |
2007 |
Publication |
In Proc. berian Conference, IbPRIA |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
290-297 |
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV;SIAI |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2431 |
|
Permanent link to this record |
|
|
|
|
Author |
Fernando Vilariño; Gerard Lacey |
|
|
Title |
QUALITY ASSESSMENT IN COLONOSCOPY New challenges through computer vision-based systems |
Type |
Conference Article |
|
Year |
2009 |
Publication |
in Proc. 3rd International Conference on Biomedical Electronics and Devices |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV;SIAI |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2430 |
|
Permanent link to this record |
|
|
|
|
Author |
Stefan Ameling; Stephan Wirth; Dietrich Paulus; Gerard Lacey; Fernando Vilariño |
|
|
Title |
Texture-based Polyp Detection in Colonoscopy |
Type |
Conference Article |
|
Year |
2009 |
Publication |
Proc. BILDVERARBEITUNG FÜR DIE MEDIZIN |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV;SIAI |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2428 |
|
Permanent link to this record |
|
|
|
|
Author |
Mirko Arnold; Anarta Ghosh; Glen Doherty; Hugh Mulcahy; Stephen Patchett; Gerard Lacey |
|
|
Title |
Towards Automatic Direct Observation of Procedure and Skill (DOPS) in Colonoscopy |
Type |
Conference Article |
|
Year |
2013 |
Publication |
Proceedings of the International Conference on Computer Vision Theory and Applications |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
48-53 |
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
VISIGRAPP |
|
|
Notes |
MV |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2427 |
|
Permanent link to this record |
|
|
|
|
Author |
Mirko Arnold; Stephan Ameling; Anarta Ghosh; Gerard Lacey |
|
|
Title |
Quality Improvement of Endoscopy Videos |
Type |
Conference Article |
|
Year |
2011 |
Publication |
Proceedings of the 8th IASTED International Conference on Biomedical Engineering |
Abbreviated Journal |
|
|
|
Volume |
723 |
Issue |
|
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2426 |
|
Permanent link to this record |
|
|
|
|
Author |
Mirko Arnold; Anarta Ghosh; Gerard Lacey; Stephen Patchett; Hugh Mulcahy |
|
|
Title |
Indistinct frame detection in colonoscopy videos |
Type |
Conference Article |
|
Year |
2009 |
Publication |
Machine Vision and Image Processing Conference |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
47-52 |
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2424 |
|
Permanent link to this record |
|
|
|
|
Author |
Mirko Arnold; Anarta Ghosh; Stephen Ameling; G Lacey |
|
|
Title |
Automatic segmentation and inpainting of specular highlights for endoscopic imaging |
Type |
Journal Article |
|
Year |
2010 |
Publication |
EURASIP Journal on Image and Video Processing |
Abbreviated Journal |
EURASIP JIVP |
|
|
Volume |
2010 |
Issue |
9 |
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2423 |
|
Permanent link to this record |
|
|
|
|
Author |
Rozenn Dhayot; Fernando Vilariño; Gerard Lacey |
|
|
Title |
Improving the Quality of Color Colonoscopy Videos |
Type |
Journal Article |
|
Year |
2008 |
Publication |
EURASIP Journal on Image and Video Processing |
Abbreviated Journal |
EURASIP JIVP |
|
|
Volume |
139429 |
Issue |
1 |
Pages |
1-9 |
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV;SIAI |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2422 |
|
Permanent link to this record |
|
|
|
|
Author |
Fernando Vilariño; Stephan Ameling; Gerard Lacey; Stephen Patchett; Hugh Mulcahy |
|
|
Title |
Eye Tracking Search Patterns in Expert and Trainee Colonoscopists: A Novel Method of Assessing Endoscopic Competency? |
Type |
Journal Article |
|
Year |
2009 |
Publication |
Gastrointestinal Endoscopy |
Abbreviated Journal |
GI |
|
|
Volume |
69 |
Issue |
5 |
Pages |
370 |
|
|
Keywords |
|
|
|
Abstract |
|
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV;SIAI |
Approved |
no |
|
|
Call Number |
fernando @ fernando @ |
Serial |
2420 |
|
Permanent link to this record |
|
|
|
|
Author |
Carles Sanchez; Jorge Bernal; Debora Gil; F. Javier Sanchez |
|
|
Title |
On-line lumen centre detection in gastrointestinal and respiratory endoscopy |
Type |
Conference Article |
|
Year |
2013 |
Publication |
Second International Workshop Clinical Image-Based Procedures |
Abbreviated Journal |
|
|
|
Volume |
8361 |
Issue |
|
Pages |
31-38 |
|
|
Keywords |
Lumen centre detection; Bronchoscopy; Colonoscopy |
|
|
Abstract |
We present in this paper a novel lumen centre detection for gastrointestinal and respiratory endoscopic images. The proposed method is based on the appearance and geometry of the lumen, which we defined as the darkest image region which centre is a hub of image gradients. Experimental results validated on the first public annotated gastro-respiratory database prove the reliability of the method for a wide range of images (with precision over 95 %). |
|
|
Address |
Nagoya; Japan; September 2013 |
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
Springer International Publishing |
Place of Publication |
|
Editor |
Erdt, Marius and Linguraru, Marius George and Oyarzun Laura, Cristina and Shekhar, Raj and Wesarg, Stefan and González Ballester, Miguel Angel and Drechsler, Klaus |
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
978-3-319-05665-4 |
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
CLIP |
|
|
Notes |
MV; IAM; 600.047; 600.044; 600.060 |
Approved |
no |
|
|
Call Number |
Admin @ si @ SBG2013 |
Serial |
2302 |
|
Permanent link to this record |
|
|
|
|
Author |
Jorge Bernal; F. Javier Sanchez; Fernando Vilariño |
|
|
Title |
Impact of Image Preprocessing Methods on Polyp Localization in Colonoscopy Frames |
Type |
Conference Article |
|
Year |
2013 |
Publication |
35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
7350 - 7354 |
|
|
Keywords |
|
|
|
Abstract |
In this paper we present our image preprocessing methods as a key part of our automatic polyp localization scheme. These methods are used to assess the impact of different endoluminal scene elements when characterizing polyps. More precisely we tackle the influence of specular highlights, blood vessels and black mask surrounding the scene. Experimental results prove that the appropriate handling of these elements leads to a great improvement in polyp localization results. |
|
|
Address |
Osaka; Japan; July 2013 |
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
1557-170X |
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
EMBC |
|
|
Notes |
MV; 600.047; 600.060;SIAI |
Approved |
no |
|
|
Call Number |
Admin @ si @ BSV2013 |
Serial |
2286 |
|
Permanent link to this record |
|
|
|
|
Author |
Jorge Bernal |
|
|
Title |
Polyp Localization and Segmentation in Colonoscopy Images by Means of a Model of Appearance for Polyps |
Type |
Book Whole |
|
Year |
2012 |
Publication |
PhD Thesis, Universitat Autonoma de Barcelona-CVC |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
|
|
|
Keywords |
|
|
|
Abstract |
Colorectal cancer is the fourth most common cause of cancer death worldwide and its survival rate depends on the stage in which it is detected on hence the necessity for an early colon screening. There are several screening techniques but colonoscopy is still nowadays the gold standard, although it has some drawbacks such as the miss rate. Our contribution, in the field of intelligent systems for colonoscopy, aims at providing a polyp localization and a polyp segmentation system based on a model of appearance for polyps. To develop both methods we define a model of appearance for polyps, which describes a polyp as enclosed by intensity valleys. The novelty of our contribution resides on the fact that we include in our model aspects of the image formation and we also consider the presence of other elements from the endoluminal scene such as specular highlights and blood vessels, which have an impact on the performance of our methods. In order to develop our polyp localization method we accumulate valley information in order to generate energy maps, which are also used to guide the polyp segmentation. Our methods achieve promising results in polyp localization and segmentation. As we want to explore the usability of our methods we present a comparative analysis between physicians fixations obtained via an eye tracking device and our polyp localization method. The results show that our method is indistinguishable to novice physicians although it is far from expert physicians. |
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
Ph.D. thesis |
|
|
Publisher |
Ediciones Graficas Rey |
Place of Publication |
|
Editor |
F. Javier Sanchez;Fernando Vilariño |
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MV |
Approved |
no |
|
|
Call Number |
Admin @ si @ Ber2012 |
Serial |
2211 |
|
Permanent link to this record |
|
|
|
|
Author |
Joan M. Nuñez; Jorge Bernal; F. Javier Sanchez; Fernando Vilariño |
|
|
Title |
Blood Vessel Characterization in Colonoscopy Images to Improve Polyp Localization |
Type |
Conference Article |
|
Year |
2013 |
Publication |
Proceedings of the International Conference on Computer Vision Theory and Applications |
Abbreviated Journal |
|
|
|
Volume |
1 |
Issue |
|
Pages |
162-171 |
|
|
Keywords |
Colonoscopy; Blood vessel; Linear features; Valley detection |
|
|
Abstract |
This paper presents an approach to mitigate the contribution of blood vessels to the energy image used at different tasks of automatic colonoscopy image analysis. This goal is achieved by introducing a characterization of endoluminal scene objects which allows us to differentiate between the trace of 2-dimensional visual objects,such as vessels, and shades from 3-dimensional visual objects, such as folds. The proposed characterization is based on the influence that the object shape has in the resulting visual feature, and it leads to the development of a blood vessel attenuation algorithm. A database consisting of manually labelled masks was built in order to test the performance of our method, which shows an encouraging success in blood vessel mitigation while keeping other structures intact. Moreover, by extending our method to the only available polyp localization
algorithm tested on a public database, blood vessel mitigation proved to have a positive influence on the overall performance. |
|
|
Address |
Barcelona; February 2013 |
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
SciTePress |
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
VISIGRAPP |
|
|
Notes |
MV; 600.054; 600.057;SIAI |
Approved |
no |
|
|
Call Number |
IAM @ iam @ NBS2013 |
Serial |
2198 |
|
Permanent link to this record |
|
|
|
|
Author |
Joan M. Nuñez; Debora Gil; Fernando Vilariño |
|
|
Title |
Finger joint characterization from X-ray images for rheymatoid arthritis assessment |
Type |
Conference Article |
|
Year |
2013 |
Publication |
6th International Conference on Biomedical Electronics and Devices |
Abbreviated Journal |
|
|
|
Volume |
|
Issue |
|
Pages |
288-292 |
|
|
Keywords |
Rheumatoid Arthritis; X-Ray; Hand Joint; Sclerosis; Sharp Van der Heijde |
|
|
Abstract |
In this study we propose amodular systemfor automatic rheumatoid arthritis assessment which provides a joint space width measure. A hand joint model is proposed based on the accurate analysis of a X-ray finger joint image sample set. This model shows that the sclerosis and the lower bone are the main necessary features in order to perform a proper finger joint characterization. We propose sclerosis and lower bone detection methods as well as the experimental setup necessary for its performance assessment. Our characterization is used to propose and compute a joint space width score which is shown to be related to the different degrees of arthritis. This assertion is verified by comparing our proposed score with Sharp Van der Heijde score, confirming that the lower our score is the more advanced is the patient affection. |
|
|
Address |
Barcelona; February 2013 |
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
SciTePress |
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
|
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
BIODEVICES |
|
|
Notes |
IAM;MV; 600.057; 600.054;SIAI |
Approved |
no |
|
|
Call Number |
IAM @ iam @ NGV2013 |
Serial |
2196 |
|
Permanent link to this record |
|
|
|
|
Author |
Santiago Segui; Michal Drozdzal; Fernando Vilariño; Carolina Malagelada; Fernando Azpiroz; Petia Radeva; Jordi Vitria |
|
|
Title |
Categorization and Segmentation of Intestinal Content Frames for Wireless Capsule Endoscopy |
Type |
Journal Article |
|
Year |
2012 |
Publication |
IEEE Transactions on Information Technology in Biomedicine |
Abbreviated Journal |
TITB |
|
|
Volume |
16 |
Issue |
6 |
Pages |
1341-1352 |
|
|
Keywords |
|
|
|
Abstract |
Wireless capsule endoscopy (WCE) is a device that allows the direct visualization of gastrointestinal tract with minimal discomfort for the patient, but at the price of a large amount of time for screening. In order to reduce this time, several works have proposed to automatically remove all the frames showing intestinal content. These methods label frames as {intestinal content – clear} without discriminating between types of content (with different physiological meaning) or the portion of image covered. In addition, since the presence of intestinal content has been identified as an indicator of intestinal motility, its accurate quantification can show a potential clinical relevance. In this paper, we present a method for the robust detection and segmentation of intestinal content in WCE images, together with its further discrimination between turbid liquid and bubbles. Our proposal is based on a twofold system. First, frames presenting intestinal content are detected by a support vector machine classifier using color and textural information. Second, intestinal content frames are segmented into {turbid, bubbles, and clear} regions. We show a detailed validation using a large dataset. Our system outperforms previous methods and, for the first time, discriminates between turbid from bubbles media. |
|
|
Address |
|
|
|
Corporate Author |
|
Thesis |
|
|
|
Publisher |
|
Place of Publication |
|
Editor |
|
|
|
Language |
|
Summary Language |
|
Original Title |
|
|
|
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
|
Series Volume |
|
Series Issue |
|
Edition |
|
|
|
ISSN |
1089-7771 |
ISBN |
|
Medium |
|
|
|
Area |
800 |
Expedition |
|
Conference |
|
|
|
Notes |
MILAB; MV; OR;SIAI |
Approved |
no |
|
|
Call Number |
Admin @ si @ SDV2012 |
Serial |
2124 |
|
Permanent link to this record |