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Panagiota Spyridonos, Fernando Vilariño, Jordi Vitria, Fernando Azpiroz, & Petia Radeva. (2006). Anisotropic Feature Extraction from Endoluminal Images for Detection of Intestinal Contractions. In and J. Sporring M. N. R. Larsen (Ed.), 9th International Conference on Medical Image Computing and Computer–Assisted Intervention (Vol. 4191, 161–168). LNCS. Berlin Heidelberg: Springer Verlag.
Abstract: Wireless endoscopy is a very recent and at the same time unique technique allowing to visualize and study the occurrence of con- tractions and to analyze the intestine motility. Feature extraction is es- sential for getting efficient patterns to detect contractions in wireless video endoscopy of small intestine. We propose a novel method based on anisotropic image filtering and efficient statistical classification of con- traction features. In particular, we apply the image gradient tensor for mining informative skeletons from the original image and a sequence of descriptors for capturing the characteristic pattern of contractions. Fea- tures extracted from the endoluminal images were evaluated in terms of their discriminatory ability in correct classifying images as either belong- ing to contractions or not. Classification was performed by means of a support vector machine classifier with a radial basis function kernel. Our classification rates gave sensitivity of the order of 90.84% and specificity of the order of 94.43% respectively. These preliminary results highlight the high efficiency of the selected descriptors and support the feasibility of the proposed method in assisting the automatic detection and analysis of contractions.
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Fernando Vilariño, Panagiota Spyridonos, Jordi Vitria, Carolina Malagelada, & Petia Radeva. (2006). Linear Radial Patterns Characterization for Automatic Detection of Tonic Intestinal Contractions. In .F. Mart ́ınez-Trinidad et al (Ed.), 11th Iberoamerican Congress on Pattern Recognition (Vol. 4225, 178–187). LNCS. Berlin Heidelberg: Springer Verlag.
Abstract: This work tackles the categorization of general linear radial patterns by means of the valleys and ridges detection and the use of descriptors of directional information, which are provided by steerable filters in different regions of the image. We successfully apply our proposal in the specific case of automatic detection of tonic contractions in video capsule endoscopy, which represent a paradigmatic example of linear radial patterns.
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Santiago Segui, Laura Igual, Fernando Vilariño, Petia Radeva, Carolina Malagelada, Fernando Azpiroz, et al. (2008). Diagnostic System for Intestinal Motility Disfunctions Using Video Capsule Endoscopy. In and J.K. Tsotsos M. V. A. Gasteratos (Ed.), Computer Vision Systems. 6th International (Vol. 5008, 251–260). LNCS. Berlin Heidelberg: Springer-Verlag.
Abstract: Wireless Video Capsule Endoscopy is a clinical technique consisting of the analysis of images from the intestine which are pro- vided by an ingestible device with a camera attached to it. In this paper we propose an automatic system to diagnose severe intestinal motility disfunctions using the video endoscopy data. The system is based on the application of computer vision techniques within a machine learn- ing framework in order to obtain the characterization of diverse motil- ity events from video sequences. We present experimental results that demonstrate the effectiveness of the proposed system and compare them with the ground-truth provided by the gastroenterologists.
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Muhammad Anwer Rao, David Vazquez, & Antonio Lopez. (2011). Color Contribution to Part-Based Person Detection in Different Types of Scenarios. In W. Kropatsch A. Berciano H. Molina D. D. P. Real (Ed.), 14th International Conference on Computer Analysis of Images and Patterns (Vol. 6855, pp. 463–470). Berlin Heidelberg: Springer.
Abstract: Camera-based person detection is of paramount interest due to its potential applications. The task is diffcult because the great variety of backgrounds (scenarios, illumination) in which persons are present, as well as their intra-class variability (pose, clothe, occlusion). In fact, the class person is one of the included in the popular PASCAL visual object classes (VOC) challenge. A breakthrough for this challenge, regarding person detection, is due to Felzenszwalb et al. These authors proposed a part-based detector that relies on histograms of oriented gradients (HOG) and latent support vector machines (LatSVM) to learn a model of the whole human body and its constitutive parts, as well as their relative position. Since the approach of Felzenszwalb et al. appeared new variants have been proposed, usually giving rise to more complex models. In this paper, we focus on an issue that has not attracted suficient interest up to now. In particular, we refer to the fact that HOG is usually computed from RGB color space, but other possibilities exist and deserve the corresponding investigation. In this paper we challenge RGB space with the opponent color space (OPP), which is inspired in the human vision system.We will compute the HOG on top of OPP, then we train and test the part-based human classifer by Felzenszwalb et al. using PASCAL VOC challenge protocols and person database. Our experiments demonstrate that OPP outperforms RGB. We also investigate possible differences among types of scenarios: indoor, urban and countryside. Interestingly, our experiments suggest that the beneficts of OPP with respect to RGB mainly come for indoor and countryside scenarios, those in which the human visual system was designed by evolution.
Keywords: Pedestrian Detection; Color
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Aura Hernandez-Sabate, Debora Gil, David Roche, Monica M. S. Matsumoto, & Sergio S. Furuie. (2011). Inferring the Performance of Medical Imaging Algorithms. In Pedro Real, Daniel Diaz-Pernil, Helena Molina-Abril, Ainhoa Berciano, & Walter Kropatsch (Eds.), 14th International Conference on Computer Analysis of Images and Patterns (Vol. 6854, pp. 520–528). LNCS. Berlin: Springer-Verlag Berlin Heidelberg.
Abstract: Evaluation of the performance and limitations of medical imaging algorithms is essential to estimate their impact in social, economic or clinical aspects. However, validation of medical imaging techniques is a challenging task due to the variety of imaging and clinical problems involved, as well as, the difficulties for systematically extracting a reliable solely ground truth. Although specific validation protocols are reported in any medical imaging paper, there are still two major concerns: definition of standardized methodologies transversal to all problems and generalization of conclusions to the whole clinical data set.
We claim that both issues would be fully solved if we had a statistical model relating ground truth and the output of computational imaging techniques. Such a statistical model could conclude to what extent the algorithm behaves like the ground truth from the analysis of a sampling of the validation data set. We present a statistical inference framework reporting the agreement and describing the relationship of two quantities. We show its transversality by applying it to validation of two different tasks: contour segmentation and landmark correspondence.
Keywords: Validation, Statistical Inference, Medical Imaging Algorithms.
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Farhan Riaz, Fernando Vilariño, Mario Dinis-Ribeiro, & Miguel Coimbraln. (2011). Identifying Potentially Cancerous Tissues in Chromoendoscopy Images. In and M. Hernandez J. M. S. J. Vitria (Ed.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 709–716). LNCS. Berlin: Springer.
Abstract: The dynamics of image acquisition conditions for gastroenterology imaging scenarios pose novel challenges for automatic computer assisted decision systems. Such systems should have the ability to mimic the tissue characterization of the physicians. In this paper, our objective is to compare some feature extraction methods to classify a Chromoendoscopy image into two different classes: Normal and Potentially cancerous. Results show that LoG filters generally give best classification accuracy among the other feature extraction methods considered.
Keywords: Endoscopy, Computer Assisted Diagnosis, Gradient.
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Jordi Vitria, Joao Sanchez, Miguel Raposo, & Mario Hernandez. (2011). Pattern Recognition and Image Analysis (J. Vitrià, J. Sanchez, M. Raposo, & M. Hernandez, Eds.) (Vol. 6669). Berlin: Springer-Verlag.
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Jon Almazan, Ernest Valveny, & Alicia Fornes. (2011). Deforming the Blurred Shape Model for Shape Description and Recognition. In Jordi Vitria, Joao Miguel Raposo, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 1–8). LNCS. Berlin: Springer-Verlag.
Abstract: This paper presents a new model for the description and recognition of distorted shapes, where the image is represented by a pixel density distribution based on the Blurred Shape Model combined with a non-linear image deformation model. This leads to an adaptive structure able to capture elastic deformations in shapes. This method has been evaluated using thee different datasets where deformations are present, showing the robustness and good performance of the new model. Moreover, we show that incorporating deformation and flexibility, the new model outperforms the BSM approach when classifying shapes with high variability of appearance.
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Marçal Rusiñol, David Aldavert, Dimosthenis Karatzas, Ricardo Toledo, & Josep Llados. (2011). Interactive Trademark Image Retrieval by Fusing Semantic and Visual Content. Advances in Information Retrieval. In P. Clough, C. Foley, C. Gurrin, G.J.F. Jones, W. Kraaij, H. Lee, et al. (Eds.), 33rd European Conference on Information Retrieval (Vol. 6611, pp. 314–325). LNCS. Berlin: Springer.
Abstract: In this paper we propose an efficient queried-by-example retrieval system which is able to retrieve trademark images by similarity from patent and trademark offices' digital libraries. Logo images are described by both their semantic content, by means of the Vienna codes, and their visual contents, by using shape and color as visual cues. The trademark descriptors are then indexed by a locality-sensitive hashing data structure aiming to perform approximate k-NN search in high dimensional spaces in sub-linear time. The resulting ranked lists are combined by using the Condorcet method and a relevance feedback step helps to iteratively revise the query and refine the obtained results. The experiments demonstrate the effectiveness and efficiency of this system on a realistic and large dataset.
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Anjan Dutta, Josep Llados, & Umapada Pal. (2011). A Bag-of-Paths Based Serialized Subgraph Matching for Symbol Spotting in Line Drawings. In Jordi Vitria, Joao Miguel Raposo, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 620–627). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: In this paper we propose an error tolerant subgraph matching algorithm based on bag-of-paths for solving the problem of symbol spotting in line drawings. Bag-of-paths is a factorized representation of graphs where the factorization is done by considering all the acyclic paths between each pair of connected nodes. Similar paths within the whole collection of documents are clustered and organized in a lookup table for efficient indexing. The lookup table contains the index key of each cluster and the corresponding list of locations as a single entry. The mean path of each of the clusters serves as the index key for each table entry. The spotting method is then formulated by a spatial voting scheme to the list of locations of the paths that are decided in terms of search of similar paths that compose the query symbol. Efficient indexing of common substructures helps to reduce the computational burden of usual graph based methods. The proposed method can also be seen as a way to serialize graphs which allows to reduce the complexity of the subgraph isomorphism. We have encoded the paths in terms of both attributed strings and turning functions, and presented a comparative results between them within the symbol spotting framework. Experimentations for matching different shape silhouettes are also reported and the method has been proved to work in noisy environment also.
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Marina Alberti, Carlo Gatta, Simone Balocco, Francesco Ciompi, Oriol Pujol, Joana Silva, et al. (2011). Automatic Branching Detection in IVUS Sequences. In Jordi Vitria, Joao Miguel Raposo, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 126–133). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: Atherosclerosis is a vascular pathology affecting the arterial walls, generally located in specific vessel sites, such as bifurcations. In this paper, for the first time, a fully automatic approach for the detection of bifurcations in IVUS pullback sequences is presented. The method identifies the frames and the angular sectors in which a bifurcation is visible. This goal is achieved by applying a classifier to a set of textural features extracted from each image of an IVUS pullback. A comparison between two state-of-the-art classifiers is performed, AdaBoost and Random Forest. A cross-validation scheme is applied in order to evaluate the performances of the approaches. The obtained results are encouraging, showing a sensitivity of 75% and an accuracy of 94% by using the AdaBoost algorithm.
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Simone Balocco, Carlo Gatta, Francesco Ciompi, Oriol Pujol, Xavier Carrillo, Josepa Mauri, et al. (2011). Combining Growcut and Temporal Correlation for IVUS Lumen Segmentation. In Jordi Vitria, Joao Miguel Raposo, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 556–563). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: The assessment of arterial luminal area, performed by IVUS analysis, is a clinical index used to evaluate the degree of coronary artery disease. In this paper we propose a novel approach to automatically segment the vessel lumen, which combines model-based temporal information extracted from successive frames of the sequence, with spatial classification using the Growcut algorithm. The performance of the method is evaluated by an in vivo experiment on 300 IVUS frames. The automatic and manual segmentation performances in general vessel and stent frames are comparable. The average segmentation error in vessel, stent and bifurcation frames are 0.17±0.08 mm, 0.18±0.07 mm and 0.31±0.12 mm respectively.
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Jaume Gibert, Ernest Valveny, & Horst Bunke. (2011). Vocabulary Selection for Graph of Words Embedding. In J. Vitria, J. M. R. Sanches, & M. Hernández (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 216–223). LNCS. Berlin: Springer.
Abstract: The Graph of Words Embedding consists in mapping every graph in a given dataset to a feature vector by counting unary and binary relations between node attributes of the graph. It has been shown to perform well for graphs with discrete label alphabets. In this paper we extend the methodology to graphs with n-dimensional continuous attributes by selecting node representatives. We propose three different discretization procedures for the attribute space and experimentally evaluate the dependence on both the selector and the number of node representatives. In the context of graph classification, the experimental results reveal that on two out of three public databases the proposed extension achieves superior performance over a standard reference system.
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Sergio Escalera, David M.J. Tax, Oriol Pujol, Petia Radeva, & Robert P.W. Duin. (2011). Multi-Class Classification in Image Analysis Via Error-Correcting Output Codes. In H. Kawasnicka, & L.Jain (Eds.), Innovations in Intelligent Image Analysis (Vol. 339, pp. 7–29). Berlin: Springer Berlin Heidelberg.
Abstract: A common way to model multi-class classification problems is by means of Error-Correcting Output Codes (ECOC). Given a multi-class problem, the ECOC technique designs a codeword for each class, where each position of the code identifies the membership of the class for a given binary problem.A classification decision is obtained by assigning the label of the class with the closest code. In this paper, we overview the state-of-the-art on ECOC designs and test them in real applications. Results on different multi-class data sets show the benefits of using the ensemble of classifiers when categorizing objects in images.
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Carlo Gatta, Simone Balocco, Victoria Martin Yuste, Ruben Leta, & Petia Radeva. (2011). Non-rigid Multi-modal Registration of Coronary Arteries Using SIFTflow. In Jordi Vitria, Joao Miguel Sanches, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 159–166). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: The fusion of clinically relevant information coming from different image modalities is an important topic in medical imaging. In particular, different cardiac imaging modalities provides complementary information for the physician: Computer Tomography Angiography (CTA) provides reliable pre-operative information on arteries geometry, even in the presence of chronic total occlusions, while X-Ray Angiography (XRA) allows intra-operative high resolution projections of a specific artery. The non-rigid registration of arteries between these two modalities is a difficult task. In this paper we propose the use of SIFTflow, in registering CTA and XRA images. At the best of our knowledge, this paper proposed SIFTflow as a XRay-CTA registration method for the first time in the literature. To highlight the arteries, so to guide the registration process, the well known Vesselness method has been employed. Results confirm that, to the aim of registration, the arteries must be highlighted and background objects removed as much as possible. Moreover, the comparison with the well known Free Form Deformation technique, suggests that SIFTflow has a great potential in the registration of multi-modal medical images.
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