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Adriana Romero. (2015). Assisting the training of deep neural networks with applications to computer vision (Carlo Gatta, & Petia Radeva, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Deep learning has recently been enjoying an increasing popularity due to its success in solving challenging tasks. In particular, deep learning has proven to be effective in a large variety of computer vision tasks, such as image classification, object recognition and image parsing. Contrary to previous research, which required engineered feature representations, designed by experts, in order to succeed, deep learning attempts to learn representation hierarchies automatically from data. More recently, the trend has been to go deeper with representation hierarchies.
Learning (very) deep representation hierarchies is a challenging task, which
involves the optimization of highly non-convex functions. Therefore, the search
for algorithms to ease the learning of (very) deep representation hierarchies from data is extensive and ongoing.
In this thesis, we tackle the challenging problem of easing the learning of (very) deep representation hierarchies. We present a hyper-parameter free, off-the-shelf, simple and fast unsupervised algorithm to discover hidden structure from the input data by enforcing a very strong form of sparsity. We study the applicability and potential of the algorithm to learn representations of varying depth in a handful of applications and domains, highlighting the ability of the algorithm to provide discriminative feature representations that are able to achieve top performance.
Yet, while emphasizing the great value of unsupervised learning methods when
labeled data is scarce, the recent industrial success of deep learning has revolved around supervised learning. Supervised learning is currently the focus of many recent research advances, which have shown to excel at many computer vision tasks. Top performing systems often involve very large and deep models, which are not well suited for applications with time or memory limitations. More in line with the current trends, we engage in making top performing models more efficient, by designing very deep and thin models. Since training such very deep models still appears to be a challenging task, we introduce a novel algorithm that guides the training of very thin and deep models by hinting their intermediate representations.
Very deep and thin models trained by the proposed algorithm end up extracting feature representations that are comparable or even better performing
than the ones extracted by large state-of-the-art models, while compellingly
reducing the time and memory consumption of the model.
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Julie Digne, Mariella Dimiccoli, Neus Sabater, & Philippe Salembier. (2015). Neighborhood Filters and the Recovery of 3D Information. In Handbook of Mathematical Methods in Imaging (pp. 1645–1673). Springer New York.
Abstract: Following their success in image processing (see Chapter Local Smoothing Neighborhood Filters), neighborhood filters have been extended to 3D surface processing. This adaptation is not straightforward. It has led to several variants for surfaces depending on whether the surface is defined as a mesh, or as a raw data point set. The image gray level in the bilateral similarity measure is replaced by a geometric information such as the normal or the curvature. The first section of this chapter reviews the variants of 3D mesh bilateral filters and compares them to the simplest possible isotropic filter, the mean curvature motion.In a second part, this chapter reviews applications of the bilateral filter to a data composed of a sparse depth map (or of depth cues) and of the image on which they have been computed. Such sparse depth cues can be obtained by stereovision or by psychophysical techniques. The underlying assumption to these applications is that pixels with similar intensity around a region are likely to have similar depths. Therefore, when diffusing depth information with a bilateral filter based on locality and color similarity, the discontinuities in depth are assured to be consistent with the color discontinuities, which is generally a desirable property. In the reviewed applications, this ends up with the reconstruction of a dense perceptual depth map from the joint data of an image and of depth cues.
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Jean-Pascal Jacob, Mariella Dimiccoli, & Lionel Moisan. (2016). Active skeleton for bacteria modeling. CMBBE - Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization, 5(4), 274–286.
Abstract: The investigation of spatio-temporal dynamics of bacterial cells and their molecular components requires automated image analysis tools to track cell shape properties and molecular component locations inside the cells. In the study of bacteria aging, the molecular components of interest are protein aggregates accumulated near bacteria boundaries. This particular location makes very ambiguous the correspondence between aggregates and cells, since computing accurately bacteria boundaries in phase-contrast time-lapse imaging is a challenging task. This paper proposes an active skeleton formulation for bacteria modeling which provides several advantages: an easy computation of shape properties (perimeter, length, thickness, orientation), an improved boundary accuracy in noisy images, and a natural bacteria-centered coordinate system that permits the intrinsic location of molecular components inside the cell. Starting from an initial skeleton estimate, the medial axis of the bacterium is obtained by minimizing an energy function which incorporates bacteria shape constraints. Experimental results on biological images and comparative evaluation of the performances validate the proposed approach for modeling cigar-shaped bacteria like Escherichia coli. The Image-J plugin of the proposed method can be found online at this http URL
Keywords: Bacteria modelling; medial axis; active contours; active skeleton; shape contraints
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Maedeh Aghaei, Mariella Dimiccoli, & Petia Radeva. (2015). Multi-Face Tracking by Extended Bag-of-Tracklets in Egocentric Videos.
Abstract: Egocentric images offer a hands-free way to record daily experiences and special events, where social interactions are of special interest. A natural question that arises is how to extract and track the appearance of multiple persons in a social event captured by a wearable camera. In this paper, we propose a novel method to find correspondences of multiple-faces in low temporal resolution egocentric sequences acquired through a wearable camera. This kind of sequences imposes additional challenges to the multitracking problem with respect to conventional videos. Due to the free motion of the camera and to its low temporal resolution (2 fpm), abrupt changes in the field of view, in illumination conditions and in the target location are very frequent. To overcome such a difficulty, we propose to generate, for each detected face, a set of correspondences along the whole sequence that we call tracklet and to take advantage of their redundancy to deal with both false positive face detections and unreliable tracklets. Similar tracklets are grouped into the so called extended bag-of-tracklets (eBoT), which are aimed to correspond to specific persons. Finally, a prototype tracklet is extracted for each eBoT. We validated our method over a dataset of 18.000 images from 38 egocentric sequences with 52 trackable persons and compared to the state-of-the-art methods, demonstrating its effectiveness and robustness.
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Jordina Torrents-Barrena, Aida Valls, Petia Radeva, Meritxell Arenas, & Domenec Puig. (2015). Automatic Recognition of Molecular Subtypes of Breast Cancer in X-Ray images using Segmentation-based Fractal Texture Analysis. In Artificial Intelligence Research and Development (Vol. 277, pp. 247–256). Frontiers in Artificial Intelligence and Applications. IOS Press.
Abstract: Breast cancer disease has recently been classified into four subtypes regarding the molecular properties of the affected tumor region. For each patient, an accurate diagnosis of the specific type is vital to decide the most appropriate therapy in order to enhance life prospects. Nowadays, advanced therapeutic diagnosis research is focused on gene selection methods, which are not robust enough. Hence, we hypothesize that computer vision algorithms can offer benefits to address the problem of discriminating among them through X-Ray images. In this paper, we propose a novel approach driven by texture feature descriptors and machine learning techniques. First, we segment the tumour part through an active contour technique and then, we perform a complete fractal analysis to collect qualitative information of the region of interest in the feature extraction stage. Finally, several supervised and unsupervised classifiers are used to perform multiclass classification of the aforementioned data. The experimental results presented in this paper support that it is possible to establish a relation between each tumor subtype and the extracted features of the patterns revealed on mammograms.
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E. Tavalera, Mariella Dimiccoli, Marc Bolaños, Maedeh Aghaei, & Petia Radeva. (2015). Regularized Clustering for Egocentric Video Segmentation. In Pattern Recognition and Image Analysis (pp. 327–336). LNCS. Springer International Publishing.
Abstract: In this paper, we present a new method for egocentric video temporal segmentation based on integrating a statistical mean change detector and agglomerative clustering(AC) within an energyminimization framework. Given the tendency of most AC methods to oversegment video sequences when clustering their frames, we combine the clustering with a concept drift detection technique (ADWIN) that has rigorous guarantee of performances. ADWIN serves as a statistical upper bound for the clustering-based video segmentation. We integrate techniques in an energy-minimization framework that serves disambiguate the decision of both techniques and to complete the segmentation taking into account the temporal continuity of video frames We present experiments over egocentric sets of more than 13.000 images acquired with different wearable cameras, showing that our method outperforms state-of-the-art clustering methods.
Keywords: Temporal video segmentation ; Egocentric videos ; Clustering
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Francesco Ciompi, Simone Balocco, Juan Rigla, Xavier Carrillo, Josefina Mauri, & Petia Radeva. (2016). Computer-Aided Detection of Intra-Coronary Stent in Intravascular Ultrasound Sequences. MP - Medical Physics, 43(10).
Abstract: Purpose: An intraluminal coronary stent is a metal mesh tube deployed in a stenotic artery during Percutaneous Coronary Intervention (PCI), in order to prevent acute vessel occlusion. The identi cation of struts location and the de nition of the stent shape are relevant for PCI planning 15 and for patient follow-up. We present a fully-automatic framework for Computer-Aided Detection
(CAD) of intra-coronary stents in Intravascular Ultrasound (IVUS) image sequences. The CAD system is able to detect stent struts and estimate the stent shape.
Methods: The proposed CAD uses machine learning to provide a comprehensive interpretation of the local structure of the vessel by means of semantic classi cation. The output of the classi cation 20 stage is then used to detect struts and to estimate the stent shape. The proposed approach is validated using a multi-centric data-set of 1,015 images from 107 IVUS sequences containing both metallic and bio-absorbable stents.
Results: The method was able to detect structs in both metallic stents with an overall F-measure of 77.7% and a mean distance of 0.15 mm from manually annotated struts, and in bio-absorbable 25 stents with an overall F-measure of 77.4% and a mean distance of 0.09 mm from manually annotated struts.
Conclusions: The results are close to the inter-observer variability and suggest that the system has the potential of being used as method for aiding percutaneous interventions.
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Mariella Dimiccoli, Benoît Girard, Alain Berthoz, & Daniel Bennequin. (2013). Striola Magica: a functional explanation of otolith organs. JCN - Journal of Computational Neuroscience, 35(2), 125–154.
Abstract: Otolith end organs of vertebrates sense linear accelerations of the head and gravitation. The hair cells on their epithelia are responsible for transduction. In mammals, the striola, parallel to the line where hair cells reverse their polarization, is a narrow region centered on a curve with curvature and torsion. It has been shown that the striolar region is functionally different from the rest, being involved in a phasic vestibular pathway. We propose a mathematical and computational model that explains the necessity of this amazing geometry for the striola to be able to carry out its function. Our hypothesis, related to the biophysics of the hair cells and to the physiology of their afferent neurons, is that striolar afferents collect information from several type I hair cells to detect the jerk in a large domain of acceleration directions. This predicts a mean number of two calyces for afferent neurons, as measured in rodents. The domain of acceleration directions sensed by our striolar model is compatible with the experimental results obtained on monkeys considering all afferents. Therefore, the main result of our study is that phasic and tonic vestibular afferents cover the same geometrical fields, but at different dynamical and frequency domains.
Keywords: Otolith organs ;Striola; Vestibular pathway
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G. de Oliveira, Mariella Dimiccoli, & Petia Radeva. (2016). Egocentric Image Retrieval With Deep Convolutional Neural Networks. In 19th International Conference of the Catalan Association for Artificial Intelligence (pp. 71–76).
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Maedeh Aghaei, Mariella Dimiccoli, & Petia Radeva. (2016). With whom do I interact with? Social interaction detection in egocentric photo-streams. In 23rd International Conference on Pattern Recognition.
Abstract: Given a user wearing a low frame rate wearable camera during a day, this work aims to automatically detect the moments when the user gets engaged into a social interaction solely by reviewing the automatically captured photos by the worn camera. The proposed method, inspired by the sociological concept of F-formation, exploits distance and orientation of the appearing individuals -with respect to the user- in the scene from a bird-view perspective. As a result, the interaction pattern over the sequence can be understood as a two-dimensional time series that corresponds to the temporal evolution of the distance and orientation features over time. A Long-Short Term Memory-based Recurrent Neural Network is then trained to classify each time series. Experimental evaluation over a dataset of 30.000 images has shown promising results on the proposed method for social interaction detection in egocentric photo-streams.
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Mariella Dimiccoli, & Petia Radeva. (2015). Lifelogging in the era of outstanding digitization. In International Conference on Digital Presentation and Preservation of Cultural and Scientific Heritage.
Abstract: In this paper, we give an overview on the emerging trend of the digitized self, focusing on visual lifelogging through wearable cameras. This is about continuously recording our life from a first-person view by wearing a camera that passively captures images. On one hand, visual lifelogging has opened the door to a large number of applications, including health. On the other, it has also boosted new challenges in the field of data analysis as well as new ethical concerns. While currently increasing efforts are being devoted to exploit lifelogging data for the improvement of personal well-being, we believe there are still many interesting applications to explore, ranging from tourism to the digitization of human behavior.
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Aniol Lidon, Xavier Giro, Marc Bolaños, Petia Radeva, Markus Seidl, & Matthias Zeppelzauer. (2015). UPC-UB-STP @ MediaEval 2015 diversity task: iterative reranking of relevant images. In 2015 MediaEval Retrieving Diverse Images Task.
Abstract: This paper presents the results of the UPC-UB-STP team in the 2015 MediaEval Retrieving Diverse Images Task. The goal of the challenge is to provide a ranked list of Flickr photos for a predefined set of queries. Our approach firstly generates a ranking of images based on a query-independent estimation of its relevance. Only top results are kept and iteratively re-ranked based on their intra-similarity to introduce diversity.
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Simone Balocco, Maria Zuluaga, Guillaume Zahnd, Su-Lin Lee, & Stefanie Demirci. (2016). Computing and Visualization for Intravascular Imaging and Computer Assisted Stenting. Elsevier.
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Petia Radeva. (2016). Can Deep Learning and Egocentric Vision for Visual Lifelogging Help Us Eat Better? In 19th International Conference of the Catalan Association for Artificial Intelligence (Vol. 4).
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Maedeh Aghaei, Mariella Dimiccoli, & Petia Radeva. (2016). With Whom Do I Interact? Detecting Social Interactions in Egocentric Photo-streams. In 23rd International Conference on Pattern Recognition.
Abstract: Given a user wearing a low frame rate wearable camera during a day, this work aims to automatically detect the moments when the user gets engaged into a social interaction solely by reviewing the automatically captured photos by the worn camera. The proposed method, inspired by the sociological concept of F-formation, exploits distance and orientation of the appearing individuals -with respect to the user- in the scene from a bird-view perspective. As a result, the interaction pattern over the sequence can be understood as a two-dimensional time series that corresponds to the temporal evolution of the distance and orientation features over time. A Long-Short Term Memory-based Recurrent Neural Network is then trained to classify each time series. Experimental evaluation over a dataset of 30.000 images has shown promising results on the proposed method for social interaction detection in egocentric photo-streams.
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