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Author |
Pau Cano; Debora Gil; Eva Musulen |
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Title |
Towards automatic detection of helicobacter pylori in histological samples of gastric tissue |
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Conference Article |
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2023 |
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IEEE International Symposium on Biomedical Imaging |
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Cartagena de Indias; Colombia; April 2023 |
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Admin @ si @ CGM2023 |
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3953 |
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Author |
Guillermo Torres; Debora Gil; Antonio Rosell; Sonia Baeza; Carles Sanchez |
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A radiomic biopsy for virtual histology of pulmonary nodules |
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Conference Article |
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2023 |
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IEEE International Symposium on Biomedical Imaging |
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Cartagena de Indias; Colombia; April 2023 |
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Admin @ si @ TGR2023b |
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3954 |
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Author |
Jose Elias Yauri |
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Title |
Deep Learning Based Data Fusion Approaches for the Assessment of Cognitive States on EEG Signals |
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Book Whole |
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2023 |
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PhD Thesis, Universitat Autonoma de Barcelona-CVC |
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For millennia, the study of the couple brain-mind has fascinated the humanity in order to understand the complex nature of cognitive states. A cognitive state is the state of the mind at a specific time and involves cognition activities to acquire and process information for making a decision, solving a problem, or achieving a goal.
While normal cognitive states assist in the successful accomplishment of tasks; on the contrary, abnormal states of the mind can lead to task failures due to a reduced cognition capability. In this thesis, we focus on the assessment of cognitive states by means of the analysis of ElectroEncephaloGrams (EEG) signals using deep learning methods. EEG records the electrical activity of the brain using a set of electrodes placed on the scalp that output a set of spatiotemporal signals that are expected to be correlated to a specific mental process.
From the point of view of artificial intelligence, any method for the assessment of cognitive states using EEG signals as input should face several challenges. On the one hand, one should determine which is the most suitable approach for the optimal combination of the multiple signals recorded by EEG electrodes. On the other hand, one should have a protocol for the collection of good quality unambiguous annotated data, and an experimental design for the assessment of the generalization and transfer of models. In order to tackle them, first, we propose several convolutional neural architectures to perform data fusion of the signals recorded by EEG electrodes, at raw signal and feature levels. Four channel fusion methods, easy to incorporate into any neural network architecture, are proposed and assessed. Second, we present a method to create an unambiguous dataset for the prediction of cognitive mental workload using serious games and an Airbus-320 flight simulator. Third, we present a validation protocol that takes into account the levels of generalization of models based on the source and amount of test data.
Finally, the approaches for the assessment of cognitive states are applied to two use cases of high social impact: the assessment of mental workload for personalized support systems in the cockpit and the detection of epileptic seizures. The results obtained from the first use case show the feasibility of task transfer of models trained to detect workload in serious games to real flight scenarios. The results from the second use case show the generalization capability of our EEG channel fusion methods at k-fold cross-validation, patient-specific, and population levels. |
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Ph.D. thesis |
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IMPRIMA |
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Aura Hernandez;Debora Gil |
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Admin @ si @ Yau2023 |
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3962 |
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Author |
Swathikiran Sudhakaran; Sergio Escalera; Oswald Lanz |
![download PDF file pdf](img/file_PDF.gif)
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Title |
Gate-Shift-Fuse for Video Action Recognition |
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Journal Article |
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Year |
2023 |
Publication |
IEEE Transactions on Pattern Analysis and Machine Intelligence |
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TPAMI |
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45 |
Issue |
9 |
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10913-10928 |
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Action Recognition; Video Classification; Spatial Gating; Channel Fusion |
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Convolutional Neural Networks are the de facto models for image recognition. However 3D CNNs, the straight forward extension of 2D CNNs for video recognition, have not achieved the same success on standard action recognition benchmarks. One of the main reasons for this reduced performance of 3D CNNs is the increased computational complexity requiring large scale annotated datasets to train them in scale. 3D kernel factorization approaches have been proposed to reduce the complexity of 3D CNNs. Existing kernel factorization approaches follow hand-designed and hard-wired techniques. In this paper we propose Gate-Shift-Fuse (GSF), a novel spatio-temporal feature extraction module which controls interactions in spatio-temporal decomposition and learns to adaptively route features through time and combine them in a data dependent manner. GSF leverages grouped spatial gating to decompose input tensor and channel weighting to fuse the decomposed tensors. GSF can be inserted into existing 2D CNNs to convert them into an efficient and high performing spatio-temporal feature extractor, with negligible parameter and compute overhead. We perform an extensive analysis of GSF using two popular 2D CNN families and achieve state-of-the-art or competitive performance on five standard action recognition benchmarks. |
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1 Sept. 2023 |
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HUPBA; no menciona |
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no |
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Admin @ si @ SEL2023 |
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3814 |
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Author |
Javier Selva; Anders S. Johansen; Sergio Escalera; Kamal Nasrollahi; Thomas B. Moeslund; Albert Clapes |
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Title |
Video transformers: A survey |
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Journal Article |
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Year |
2023 |
Publication |
IEEE Transactions on Pattern Analysis and Machine Intelligence |
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TPAMI |
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45 |
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11 |
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12922-12943 |
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Artificial Intelligence; Computer Vision; Self-Attention; Transformers; Video Representations |
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Transformer models have shown great success handling long-range interactions, making them a promising tool for modeling video. However, they lack inductive biases and scale quadratically with input length. These limitations are further exacerbated when dealing with the high dimensionality introduced by the temporal dimension. While there are surveys analyzing the advances of Transformers for vision, none focus on an in-depth analysis of video-specific designs. In this survey, we analyze the main contributions and trends of works leveraging Transformers to model video. Specifically, we delve into how videos are handled at the input level first. Then, we study the architectural changes made to deal with video more efficiently, reduce redundancy, re-introduce useful inductive biases, and capture long-term temporal dynamics. In addition, we provide an overview of different training regimes and explore effective self-supervised learning strategies for video. Finally, we conduct a performance comparison on the most common benchmark for Video Transformers (i.e., action classification), finding them to outperform 3D ConvNets even with less computational complexity. |
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1 Nov. 2023 |
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HUPBA; no menciona |
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no |
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Admin @ si @ SJE2023 |
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3823 |
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Author |
German Barquero; Sergio Escalera; Cristina Palmero |
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Title |
BeLFusion: Latent Diffusion for Behavior-Driven Human Motion Prediction |
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Conference Article |
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2023 |
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IEEE/CVF International Conference on Computer Vision (ICCV) Workshops |
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2317-2327 |
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Stochastic human motion prediction (HMP) has generally been tackled with generative adversarial networks and variational autoencoders. Most prior works aim at predicting highly diverse movements in terms of the skeleton joints’ dispersion. This has led to methods predicting fast and motion-divergent movements, which are often unrealistic and incoherent with past motion. Such methods also neglect contexts that need to anticipate diverse low-range behaviors, or actions, with subtle joint displacements. To address these issues, we present BeLFusion, a model that, for the first time, leverages latent diffusion models in HMP to sample from a latent space where behavior is disentangled from pose and motion. As a result, diversity is encouraged from a behavioral perspective. Thanks to our behavior
coupler’s ability to transfer sampled behavior to ongoing motion, BeLFusion’s predictions display a variety of behaviors that are significantly more realistic than the state of the art. To support it, we introduce two metrics, the Area of
the Cumulative Motion Distribution, and the Average Pairwise Distance Error, which are correlated to our definition of realism according to a qualitative study with 126 participants. Finally, we prove BeLFusion’s generalization power in a new cross-dataset scenario for stochastic HMP. |
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2-6 October 2023. Paris (France) |
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ICCV |
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HUPBA; no menciona |
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no |
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Admin @ si @ BEP2023 |
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3829 |
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Author |
Benjia Zhou; Zhigang Chen; Albert Clapes; Jun Wan; Yanyan Liang; Sergio Escalera; Zhen Lei; Du Zhang |
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Gloss-free Sign Language Translation: Improving from Visual-Language Pretraining |
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Conference Article |
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2023 |
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IEEE/CVF International Conference on Computer Vision (ICCV) Workshops |
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Sign Language Translation (SLT) is a challenging task due to its cross-domain nature, involving the translation of visual-gestural language to text. Many previous methods employ an intermediate representation, i.e., gloss sequences, to facilitate SLT, thus transforming it into a two-stage task of sign language recognition (SLR) followed by sign language translation (SLT). However, the scarcity of gloss-annotated sign language data, combined with the information bottleneck in the mid-level gloss representation, has hindered the further development of the SLT task. To address this challenge, we propose a novel Gloss-Free SLT based on Visual-Language Pretraining (GFSLT-VLP), which improves SLT by inheriting language-oriented prior knowledge from pre-trained models, without any gloss annotation assistance. Our approach involves two stages: (i) integrating Contrastive Language-Image Pre-training (CLIP) with masked self-supervised learning to create pre-tasks that bridge the semantic gap between visual and textual representations and restore masked sentences, and (ii) constructing an end-to-end architecture with an encoder-decoder-like structure that inherits the parameters of the pre-trained Visual Encoder and Text Decoder from the first stage. The seamless combination of these novel designs forms a robust sign language representation and significantly improves gloss-free sign language translation. In particular, we have achieved unprecedented improvements in terms of BLEU-4 score on the PHOENIX14T dataset (>+5) and the CSL-Daily dataset (>+3) compared to state-of-the-art gloss-free SLT methods. Furthermore, our approach also achieves competitive results on the PHOENIX14T dataset when compared with most of the gloss-based methods. |
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Vancouver; Canada; June 2023 |
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HUPBA; |
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Admin @ si @ ZCC2023 |
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3839 |
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Reuben Dorent; Aaron Kujawa; Marina Ivory; Spyridon Bakas; Nikola Rieke; Samuel Joutard; Ben Glocker; Jorge Cardoso; Marc Modat; Kayhan Batmanghelich; Arseniy Belkov; Maria Baldeon Calisto; Jae Won Choi; Benoit M. Dawant; Hexin Dong; Sergio Escalera; Yubo Fan; Lasse Hansen; Mattias P. Heinrich; Smriti Joshi; Victoriya Kashtanova; Hyeon Gyu Kim; Satoshi Kondo; Christian N. Kruse; Susana K. Lai-Yuen; Hao Li; Han Liu; Buntheng Ly; Ipek Oguz; Hyungseob Shin; Boris Shirokikh; Zixian Su; Guotai Wang; Jianghao Wu; Yanwu Xu; Kai Yao; Li Zhang; Sebastien Ourselin, |
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Title |
CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwannoma and Cochlea Segmentation |
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Journal Article |
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2023 |
Publication |
Medical Image Analysis |
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MIA |
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83 |
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102628 |
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Domain Adaptation; Segmen tation; Vestibular Schwnannoma |
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Domain Adaptation (DA) has recently raised strong interests in the medical imaging community. While a large variety of DA techniques has been proposed for image segmentation, most of these techniques have been validated either on private datasets or on small publicly available datasets. Moreover, these datasets mostly addressed single-class problems. To tackle these limitations, the Cross-Modality Domain Adaptation (crossMoDA) challenge was organised in conjunction with the 24th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2021). CrossMoDA is the first large and multi-class benchmark for unsupervised cross-modality DA. The challenge's goal is to segment two key brain structures involved in the follow-up and treatment planning of vestibular schwannoma (VS): the VS and the cochleas. Currently, the diagnosis and surveillance in patients with VS are performed using contrast-enhanced T1 (ceT1) MRI. However, there is growing interest in using non-contrast sequences such as high-resolution T2 (hrT2) MRI. Therefore, we created an unsupervised cross-modality segmentation benchmark. The training set provides annotated ceT1 (N=105) and unpaired non-annotated hrT2 (N=105). The aim was to automatically perform unilateral VS and bilateral cochlea segmentation on hrT2 as provided in the testing set (N=137). A total of 16 teams submitted their algorithm for the evaluation phase. The level of performance reached by the top-performing teams is strikingly high (best median Dice – VS:88.4%; Cochleas:85.7%) and close to full supervision (median Dice – VS:92.5%; Cochleas:87.7%). All top-performing methods made use of an image-to-image translation approach to transform the source-domain images into pseudo-target-domain images. A segmentation network was then trained using these generated images and the manual annotations provided for the source image. |
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HUPBA |
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Admin @ si @ DKI2023 |
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3706 |
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Author |
David Pujol Perich; Albert Clapes; Sergio Escalera |
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Title |
SADA: Semantic adversarial unsupervised domain adaptation for Temporal Action Localization |
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Miscellaneous |
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2023 |
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Arxiv |
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Temporal Action Localization (TAL) is a complex task that poses relevant challenges, particularly when attempting to generalize on new -- unseen -- domains in real-world applications. These scenarios, despite realistic, are often neglected in the literature, exposing these solutions to important performance degradation. In this work, we tackle this issue by introducing, for the first time, an approach for Unsupervised Domain Adaptation (UDA) in sparse TAL, which we refer to as Semantic Adversarial unsupervised Domain Adaptation (SADA). Our contributions are threefold: (1) we pioneer the development of a domain adaptation model that operates on realistic sparse action detection benchmarks; (2) we tackle the limitations of global-distribution alignment techniques by introducing a novel adversarial loss that is sensitive to local class distributions, ensuring finer-grained adaptation; and (3) we present a novel set of benchmarks based on EpicKitchens100 and CharadesEgo, that evaluate multiple domain shifts in a comprehensive manner. Our experiments indicate that SADA improves the adaptation across domains when compared to fully supervised state-of-the-art and alternative UDA methods, attaining a performance boost of up to 6.14% mAP. |
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HUPBA |
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Admin @ si @ PCE2023 |
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4014 |
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Lei Li; Fuping Wu; Sihan Wang; Xinzhe Luo; Carlos Martin-Isla; Shuwei Zhai; Jianpeng Zhang; Yanfei Liu; Zhen Zhang; Markus J. Ankenbrand; Haochuan Jiang; Xiaoran Zhang; Linhong Wang; Tewodros Weldebirhan Arega; Elif Altunok; Zhou Zhao; Feiyan Li; Jun Ma; Xiaoping Yang; Elodie Puybareau; Ilkay Oksuz; Stephanie Bricq; Weisheng Li;Kumaradevan Punithakumar; Sotirios A. Tsaftaris; Laura M. Schreiber; Mingjing Yang; Guocai Liu; Yong Xia; Guotai Wang; Sergio Escalera; Xiahai Zhuag |
![goto web page url](img/www.gif)
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Title |
MyoPS: A benchmark of myocardial pathology segmentation combining three-sequence cardiac magnetic resonance images |
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Journal Article |
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2023 |
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Medical Image Analysis |
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MIA |
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87 |
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102808 |
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Assessment of myocardial viability is essential in diagnosis and treatment management of patients suffering from myocardial infarction, and classification of pathology on the myocardium is the key to this assessment. This work defines a new task of medical image analysis, i.e., to perform myocardial pathology segmentation (MyoPS) combining three-sequence cardiac magnetic resonance (CMR) images, which was first proposed in the MyoPS challenge, in conjunction with MICCAI 2020. Note that MyoPS refers to both myocardial pathology segmentation and the challenge in this paper. The challenge provided 45 paired and pre-aligned CMR images, allowing algorithms to combine the complementary information from the three CMR sequences for pathology segmentation. In this article, we provide details of the challenge, survey the works from fifteen participants and interpret their methods according to five aspects, i.e., preprocessing, data augmentation, learning strategy, model architecture and post-processing. In addition, we analyze the results with respect to different factors, in order to examine the key obstacles and explore the potential of solutions, as well as to provide a benchmark for future research. The average Dice scores of submitted algorithms were and for myocardial scars and edema, respectively. We conclude that while promising results have been reported, the research is still in the early stage, and more in-depth exploration is needed before a successful application to the clinics. MyoPS data and evaluation tool continue to be publicly available upon registration via its homepage (www.sdspeople.fudan.edu.cn/zhuangxiahai/0/myops20/). |
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Admin @ si @ LWW2023a |
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3878 |
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Razieh Rastgoo; Kourosh Kiani; Sergio Escalera |
![goto web page url](img/www.gif)
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ZS-GR: zero-shot gesture recognition from RGB-D videos |
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2023 |
Publication |
Multimedia Tools and Applications |
Abbreviated Journal |
MTAP |
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82 |
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43781-43796 |
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Gesture Recognition (GR) is a challenging research area in computer vision. To tackle the annotation bottleneck in GR, we formulate the problem of Zero-Shot Gesture Recognition (ZS-GR) and propose a two-stream model from two input modalities: RGB and Depth videos. To benefit from the vision Transformer capabilities, we use two vision Transformer models, for human detection and visual features representation. We configure a transformer encoder-decoder architecture, as a fast and accurate human detection model, to overcome the challenges of the current human detection models. Considering the human keypoints, the detected human body is segmented into nine parts. A spatio-temporal representation from human body is obtained using a vision Transformer and a LSTM network. A semantic space maps the visual features to the lingual embedding of the class labels via a Bidirectional Encoder Representations from Transformers (BERT) model. We evaluated the proposed model on five datasets, Montalbano II, MSR Daily Activity 3D, CAD-60, NTU-60, and isoGD obtaining state-of-the-art results compared to state-of-the-art ZS-GR models as well as the Zero-Shot Action Recognition (ZS-AR). |
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Admin @ si @ RKE2023a |
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3879 |
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Carlos Martin-Isla; Victor M Campello; Cristian Izquierdo; Kaisar Kushibar; Carla Sendra Balcells; Polyxeni Gkontra; Alireza Sojoudi; Mitchell J Fulton; Tewodros Weldebirhan Arega; Kumaradevan Punithakumar; Lei Li; Xiaowu Sun; Yasmina Al Khalil; Di Liu; Sana Jabbar; Sandro Queiros; Francesco Galati; Moona Mazher; Zheyao Gao; Marcel Beetz; Lennart Tautz; Christoforos Galazis; Marta Varela; Markus Hullebrand; Vicente Grau; Xiahai Zhuang; Domenec Puig; Maria A Zuluaga; Hassan Mohy Ud Din; Dimitris Metaxas; Marcel Breeuwer; Rob J van der Geest; Michelle Noga; Stephanie Bricq; Mark E Rentschler; Andrea Guala; Steffen E Petersen; Sergio Escalera; Jose F Rodriguez Palomares; Karim Lekadir |
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Title |
Deep Learning Segmentation of the Right Ventricle in Cardiac MRI: The M&ms Challenge |
Type |
Journal Article |
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Year |
2023 |
Publication |
IEEE Journal of Biomedical and Health Informatics |
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JBHI |
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27 |
Issue |
7 |
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3302-3313 |
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In recent years, several deep learning models have been proposed to accurately quantify and diagnose cardiac pathologies. These automated tools heavily rely on the accurate segmentation of cardiac structures in MRI images. However, segmentation of the right ventricle is challenging due to its highly complex shape and ill-defined borders. Hence, there is a need for new methods to handle such structure's geometrical and textural complexities, notably in the presence of pathologies such as Dilated Right Ventricle, Tricuspid Regurgitation, Arrhythmogenesis, Tetralogy of Fallot, and Inter-atrial Communication. The last MICCAI challenge on right ventricle segmentation was held in 2012 and included only 48 cases from a single clinical center. As part of the 12th Workshop on Statistical Atlases and Computational Models of the Heart (STACOM 2021), the M&Ms-2 challenge was organized to promote the interest of the research community around right ventricle segmentation in multi-disease, multi-view, and multi-center cardiac MRI. Three hundred sixty CMR cases, including short-axis and long-axis 4-chamber views, were collected from three Spanish hospitals using nine different scanners from three different vendors, and included a diverse set of right and left ventricle pathologies. The solutions provided by the participants show that nnU-Net achieved the best results overall. However, multi-view approaches were able to capture additional information, highlighting the need to integrate multiple cardiac diseases, views, scanners, and acquisition protocols to produce reliable automatic cardiac segmentation algorithms. |
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no |
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Admin @ si @ MCI2023 |
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3880 |
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Razieh Rastgoo; Kourosh Kiani; Sergio Escalera |
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A deep co-attentive hand-based video question answering framework using multi-view skeleton |
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Journal Article |
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2023 |
Publication |
Multimedia Tools and Applications |
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MTAP |
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82 |
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1401–1429 |
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In this paper, we present a novel hand –based Video Question Answering framework, entitled Multi-View Video Question Answering (MV-VQA), employing the Single Shot Detector (SSD), Convolutional Neural Network (CNN), Long Short-Term Memory (LSTM), Bidirectional Encoder Representations from Transformers (BERT), and Co-Attention mechanism with RGB videos as the inputs. Our model includes three main blocks: vision, language, and attention. In the vision block, we employ a novel representation to obtain some efficient multiview features from the hand object using the combination of five 3DCNNs and one LSTM network. To obtain the question embedding, we use the BERT model in language block. Finally, we employ a co-attention mechanism on vision and language features to recognize the final answer. For the first time, we propose such a hand-based Video-QA framework including the multi-view hand skeleton features combined with the question embedding and co-attention mechanism. Our framework is capable of processing the arbitrary numbers of questions in the dataset annotations. There are different application domains for this framework. Here, as an application domain, we applied our framework to dynamic hand gesture recognition for the first time. Since the main object in dynamic hand gesture recognition is the human hand, we performed a step-by-step analysis of the hand detection and multi-view hand skeleton impact on the model performance. Evaluation results on five datasets, including two datasets in VideoQA, two datasets in dynamic hand gesture, and one dataset in hand action recognition show that MV-VQA outperforms state-of-the-art alternatives. |
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no |
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Admin @ si @ RKE2023b |
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3881 |
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Mickael Cormier; Andreas Specker; Julio C. S. Jacques; Lucas Florin; Jurgen Metzler; Thomas B. Moeslund; Kamal Nasrollahi; Sergio Escalera; Jurgen Beyerer |
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UPAR Challenge: Pedestrian Attribute Recognition and Attribute-based Person Retrieval – Dataset, Design, and Results |
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Conference Article |
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2023 |
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2023 IEEE/CVF Winter Conference on Applications of Computer Vision Workshops |
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166-175 |
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In civilian video security monitoring, retrieving and tracking a person of interest often rely on witness testimony and their appearance description. Deployed systems rely on a large amount of annotated training data and are expected to show consistent performance in diverse areas and gen-eralize well between diverse settings w.r.t. different view-points, illumination, resolution, occlusions, and poses for indoor and outdoor scenes. However, for such generalization, the system would require a large amount of various an-notated data for training and evaluation. The WACV 2023 Pedestrian Attribute Recognition and Attributed-based Per-son Retrieval Challenge (UPAR-Challenge) aimed to spot-light the problem of domain gaps in a real-world surveil-lance context and highlight the challenges and limitations of existing methods. The UPAR dataset, composed of 40 important binary attributes over 12 attribute categories across four datasets, was extended with data captured from a low-flying UAV from the P-DESTRE dataset. To this aim, 0.6M additional annotations were manually labeled and vali-dated. Each track evaluated the robustness of the competing methods to domain shifts by training on limited data from a specific domain and evaluating using data from unseen do-mains. The challenge attracted 41 registered participants, but only one team managed to outperform the baseline on one track, emphasizing the task's difficulty. This work de-scribes the challenge design, the adopted dataset, obtained results, as well as future directions on the topic. |
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Waikoloa; Hawai; USA; January 2023 |
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WACVW |
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Admin @ si @ CSJ2023 |
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3902 |
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Hao Fang; Ajian Liu; Jun Wan; Sergio Escalera; Hugo Jair Escalante; Zhen Lei |
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Title |
Surveillance Face Presentation Attack Detection Challenge |
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Conference Article |
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2023 |
Publication |
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops |
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6360-6370 |
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Face Anti-spoofing (FAS) is essential to secure face recognition systems from various physical attacks. However, most of the studies lacked consideration of long-distance scenarios. Specifically, compared with FAS in traditional scenes such as phone unlocking, face payment, and self-service security inspection, FAS in long-distance such as station squares, parks, and self-service supermarkets are equally important, but it has not been sufficiently explored yet. In order to fill this gap in the FAS community, we collect a large-scale Surveillance High-Fidelity Mask (SuHiFiMask). SuHiFiMask contains 10,195 videos from 101 subjects of different age groups, which are collected by 7 mainstream surveillance cameras. Based on this dataset and protocol-3 for evaluating the robustness of the algorithm under quality changes, we organized a face presentation attack detection challenge in surveillance scenarios. It attracted 180 teams for the development phase with a total of 37 teams qualifying for the final round. The organization team re-verified and re-ran the submitted code and used the results as the final ranking. In this paper, we present an overview of the challenge, including an introduction to the dataset used, the definition of the protocol, the evaluation metrics, and the announcement of the competition results. Finally, we present the top-ranked algorithms and the research ideas provided by the competition for attack detection in long-range surveillance scenarios. |
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Vancouver; Canada; June 2023 |
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CVPRW |
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HuPBA |
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no |
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Admin @ si @ FLW2023 |
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3917 |
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