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Francesco Ciompi; Oriol Pujol; Carlo Gatta; Oriol Rodriguez-Leor; J. Mauri; Petia Radeva |
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Title |
Fusing in-vitro and in-vivo intravascular ultrasound data for plaque characterization |
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Journal Article |
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Year |
2010 |
Publication |
International Journal of Cardiovascular Imaging |
Abbreviated Journal |
IJCI |
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Volume |
26 |
Issue |
7 |
Pages |
763–779 |
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Accurate detection of in-vivo vulnerable plaque in coronary arteries is still an open problem. Recent studies show that it is highly related to tissue structure and composition. Intravascular Ultrasound (IVUS) is a powerful imaging technique that gives a detailed cross-sectional image of the vessel, allowing to explore arteries morphology. IVUS data validation is usually performed by comparing post-mortem (in-vitro) IVUS data and corresponding histological analysis of the tissue. The main drawback of this method is the few number of available case studies and validated data due to the complex procedure of histological analysis of the tissue. On the other hand, IVUS data from in-vivo cases is easy to obtain but it can not be histologically validated. In this work, we propose to enhance the in-vitro training data set by selectively including examples from in-vivo plaques. For this purpose, a Sequential Floating Forward Selection method is reformulated in the context of plaque characterization. The enhanced classifier performance is validated on in-vitro data set, yielding an overall accuracy of 91.59% in discriminating among fibrotic, lipidic and calcified plaques, while reducing the gap between in-vivo and in-vitro data analysis. Experimental results suggest that the obtained classifier could be properly applied on in-vivo plaque characterization and also demonstrate that the common hypothesis of assuming the difference between in-vivo and in-vitro as negligible is incorrect. |
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1569-5794 |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ CPG2010 |
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1305 |
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Author |
Simone Balocco; O. Basset; G. Courbebaisse; E. Boni; Alejandro F. Frangi; P. Tortoli; C. Cachard |
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Title |
Estimation Of Viscoelastic Properties Of Vessel Walls Using a Computational Model and Doppler Ultrasound |
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2010 |
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Physics in Medicine and Biology |
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PMB |
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55 |
Issue |
12 |
Pages |
3557–3575 |
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Human arteries affected by atherosclerosis are characterized by altered wall viscoelastic properties. The possibility of noninvasively assessing arterial viscoelasticity in vivo would significantly contribute to the early diagnosis and prevention of this disease. This paper presents a noniterative technique to estimate the viscoelastic parameters of a vascular wall Zener model. The approach requires the simultaneous measurement of flow variations and wall displacements, which can be provided by suitable ultrasound Doppler instruments. Viscoelastic parameters are estimated by fitting the theoretical constitutive equations to the experimental measurements using an ARMA parameter approach. The accuracy and sensitivity of the proposed method are tested using reference data generated by numerical simulations of arterial pulsation in which the physiological conditions and the viscoelastic parameters of the model can be suitably varied. The estimated values quantitatively agree with the reference values, showing that the only parameter affected by changing the physiological conditions is viscosity, whose relative error was about 27% even when a poor signal-to-noise ratio is simulated. Finally, the feasibility of the method is illustrated through three measurements made at different flow regimes on a cylindrical vessel phantom, yielding a parameter mean estimation error of 25%. |
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BCNPCL @ bcnpcl @ BBC2010 |
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1312 |
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Simone Balocco; O. Camara; E. Vivas; T. Sola; L. Guimaraens; H. A. van Andel; C. B. Majoie; J. M. Pozo; B. H. Bijnens; Alejandro F. Frangi |
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Title |
Feasibility of Estimating Regional Mechanical Properties of Cerebral Aneurysms In Vivo |
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Journal Article |
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Year |
2010 |
Publication |
Medical Physics |
Abbreviated Journal |
MEDPHYS |
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Volume |
37 |
Issue |
4 |
Pages |
1689–1706 |
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PURPOSE:
In this article, the authors studied the feasibility of estimating regional mechanical properties in cerebral aneurysms, integrating information extracted from imaging and physiological data with generic computational models of the arterial wall behavior.
METHODS:
A data assimilation framework was developed to incorporate patient-specific geometries into a given biomechanical model, whereas wall motion estimates were obtained from applying registration techniques to a pair of simulated MR images and guided the mechanical parameter estimation. A simple incompressible linear and isotropic Hookean model coupled with computational fluid-dynamics was employed as a first approximation for computational purposes. Additionally, an automatic clustering technique was developed to reduce the number of parameters to assimilate at the optimization stage and it considerably accelerated the convergence of the simulations. Several in silico experiments were designed to assess the influence of aneurysm geometrical characteristics and the accuracy of wall motion estimates on the mechanical property estimates. Hence, the proposed methodology was applied to six real cerebral aneurysms and tested against a varying number of regions with different elasticity, different mesh discretization, imaging resolution, and registration configurations.
RESULTS:
Several in silico experiments were conducted to investigate the feasibility of the proposed workflow, results found suggesting that the estimation of the mechanical properties was mainly influenced by the image spatial resolution and the chosen registration configuration. According to the in silico experiments, the minimal spatial resolution needed to extract wall pulsation measurements with enough accuracy to guide the proposed data assimilation framework was of 0.1 mm.
CONCLUSIONS:
Current routine imaging modalities do not have such a high spatial resolution and therefore the proposed data assimilation framework cannot currently be used on in vivo data to reliably estimate regional properties in cerebral aneurysms. Besides, it was observed that the incorporation of fluid-structure interaction in a biomechanical model with linear and isotropic material properties did not have a substantial influence in the final results. |
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BCNPCL @ bcnpcl @ BCV2010 |
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1313 |
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Author |
Simone Balocco; Carlo Gatta; Oriol Pujol; J. Mauri; Petia Radeva |
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Title |
SRBF: Speckle Reducing Bilateral Filtering |
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2010 |
Publication |
Ultrasound in Medicine and Biology |
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UMB |
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36 |
Issue |
8 |
Pages |
1353-1363 |
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Speckle noise negatively affects medical ultrasound image shape interpretation and boundary detection. Speckle removal filters are widely used to selectively remove speckle noise without destroying important image features to enhance object boundaries. In this article, a fully automatic bilateral filter tailored to ultrasound images is proposed. The edge preservation property is obtained by embedding noise statistics in the filter framework. Consequently, the filter is able to tackle the multiplicative behavior modulating the smoothing strength with respect to local statistics. The in silico experiments clearly showed that the speckle reducing bilateral filter (SRBF) has superior performances to most of the state of the art filtering methods. The filter is tested on 50 in vivo US images and its influence on a segmentation task is quantified. The results using SRBF filtered data sets show a superior performance to using oriented anisotropic diffusion filtered images. This improvement is due to the adaptive support of SRBF and the embedded noise statistics, yielding a more homogeneous smoothing. SRBF results in a fully automatic, fast and flexible algorithm potentially suitable in wide ranges of speckle noise sizes, for different medical applications (IVUS, B-mode, 3-D matrix array US). |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ BGP2010 |
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1314 |
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Author |
Alicia Fornes; Josep Llados; Gemma Sanchez; Xavier Otazu; Horst Bunke |
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Title |
A Combination of Features for Symbol-Independent Writer Identification in Old Music Scores |
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Journal Article |
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Year |
2010 |
Publication |
International Journal on Document Analysis and Recognition |
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IJDAR |
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Volume |
13 |
Issue |
4 |
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243-259 |
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Abstract |
The aim of writer identification is determining the writer of a piece of handwriting from a set of writers. In this paper, we present an architecture for writer identification in old handwritten music scores. Even though an important amount of music compositions contain handwritten text, the aim of our work is to use only music notation to determine the author. The main contribution is therefore the use of features extracted from graphical alphabets. Our proposal consists in combining the identification results of two different approaches, based on line and textural features. The steps of the ensemble architecture are the following. First of all, the music sheet is preprocessed for removing the staff lines. Then, music lines and texture images are generated for computing line features and textural features. Finally, the classification results are combined for identifying the writer. The proposed method has been tested on a database of old music scores from the seventeenth to nineteenth centuries, achieving a recognition rate of about 92% with 20 writers. |
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Springer-Verlag |
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1433-2833 |
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DAG; CAT;CIC |
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Call Number |
FLS2010b |
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1319 |
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Author |
C. Alejandro Parraga; Robert Benavente; Maria Vanrell |
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Title |
Towards a general model of colour categorization which considers context |
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Journal Article |
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Year |
2010 |
Publication |
Perception. ECVP Abstract Supplement |
Abbreviated Journal |
PER |
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Volume |
39 |
Issue |
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Pages |
86 |
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In two previous experiments [Parraga et al, 2009 J. of Im. Sci. and Tech 53(3) 031106; Benavente et al,2009 Perception 38 ECVP Supplement, 36] the boundaries of basic colour categories were measured.
In the first experiment, samples were presented in isolation (ie on a dark background) and boundaries were measured using a yes/no paradigm. In the second, subjects adjusted the chromaticity of a sample presented on a random Mondrian background to find the boundary between pairs of adjacent colours.
Results from these experiments showed significant di erences but it was not possible to conclude whether this discrepancy was due to the absence/presence of a colourful background or to the di erences in the paradigms used. In this work, we settle this question by repeating the first experiment (ie samples presented on a dark background) using the second paradigm. A comparison of results shows that
although boundary locations are very similar, boundaries measured in context are significantly di erent(more di use) than those measured in isolation (confirmed by a Student’s t-test analysis on the subject’s answers statistical distributions). In addition, we completed the mapping of colour name space by measuring the boundaries between chromatic colours and the achromatic centre. With these results we
completed our parametric fuzzy-sets model of colour naming space. |
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CIC |
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CAT @ cat @ PBV2010b |
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1326 |
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Author |
Umapada Pal; Partha Pratim Roy; N. Tripathya; Josep Llados |
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Title |
Multi-oriented Bangla and Devnagari text recognition |
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Journal Article |
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Year |
2010 |
Publication |
Pattern Recognition |
Abbreviated Journal |
PR |
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43 |
Issue |
12 |
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4124–4136 |
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There are printed complex documents where text lines of a single page may have different orientations or the text lines may be curved in shape. As a result, it is difficult to detect the skew of such documents and hence character segmentation and recognition of such documents are a complex task. In this paper, using background and foreground information we propose a novel scheme towards the recognition of Indian complex documents of Bangla and Devnagari script. In Bangla and Devnagari documents usually characters in a word touch and they form cavity regions. To take care of these cavity regions, background information of such documents is used. Convex hull and water reservoir principle have been applied for this purpose. Here, at first, the characters are segmented from the documents using the background information of the text. Next, individual characters are recognized using rotation invariant features obtained from the foreground part of the characters.
For character segmentation, at first, writing mode of a touching component (word) is detected using water reservoir principle based features. Next, depending on writing mode and the reservoir base-region of the touching component, a set of candidate envelope points is then selected from the contour points of the component. Based on these candidate points, the touching component is finally segmented into individual characters. For recognition of multi-sized/multi-oriented characters the features are computed from different angular information obtained from the external and internal contour pixels of the characters. These angular information are computed in such a way that they do not depend on the size and rotation of the characters. Circular and convex hull rings have been used to divide a character into smaller zones to get zone-wise features for higher recognition results. We combine circular and convex hull features to improve the results and these features are fed to support vector machines (SVM) for recognition. From our experiment we obtained recognition results of 99.18% (98.86%) accuracy when tested on 7515 (7874) Devnagari (Bangla) characters. |
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Elsevier |
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DAG @ dag @ PRT2010 |
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1337 |
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Author |
Sergio Escalera; Oriol Pujol; Petia Radeva |
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Title |
Re-coding ECOCs without retraining |
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Journal Article |
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2010 |
Publication |
Pattern Recognition Letters |
Abbreviated Journal |
PRL |
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31 |
Issue |
7 |
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555–562 |
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A standard way to deal with multi-class categorization problems is by the combination of binary classifiers in a pairwise voting procedure. Recently, this classical approach has been formalized in the Error-Correcting Output Codes (ECOC) framework. In the ECOC framework, the one-versus-one coding demonstrates to achieve higher performance than the rest of coding designs. The binary problems that we train in the one-versus-one strategy are significantly smaller than in the rest of designs, and usually easier to be learnt, taking into account the smaller overlapping between classes. However, a high percentage of the positions coded by zero of the coding matrix, which implies a high sparseness degree, does not codify meta-class membership information. In this paper, we show that using the training data we can redefine without re-training, in a problem-dependent way, the one-versus-one coding matrix so that the new coded information helps the system to increase its generalization capability. Moreover, the new re-coding strategy is generalized to be applied over any binary code. The results over several UCI Machine Learning repository data sets and two real multi-class problems show that performance improvements can be obtained re-coding the classical one-versus-one and Sparse random designs compared to different state-of-the-art ECOC configurations. |
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Elsevier |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ EPR2010e |
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1338 |
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Author |
Olivier Penacchio; C. Alejandro Parraga; Maria Vanrell |
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Title |
Natural Scene Statistics account for Human Cones Ratios |
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2010 |
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Perception. ECVP Abstract Supplement |
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PER |
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39 |
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101 |
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Abstract |
In two previous experiments [Parraga et al, 2009 J. of Im. Sci. and Tech 53(3) 031106; Benavente et al,2009 Perception 38 ECVP Supplement, 36] the boundaries of basic colour categories were measured.
In the first experiment, samples were presented in isolation (ie on a dark background) and boundaries were measured using a yes/no paradigm. In the second, subjects adjusted the chromaticity of a sample presented on a random Mondrian background to find the boundary between pairs of adjacent colours.
Results from these experiments showed significant di erences but it was not possible to conclude whether this discrepancy was due to the absence/presence of a colourful background or to the di erences in the paradigms used. In this work, we settle this question by repeating the first experiment (ie samples presented on a dark background) using the second paradigm. A comparison of results shows that
although boundary locations are very similar, boundaries measured in context are significantly di erent(more di use) than those measured in isolation (confirmed by a Student’s t-test analysis on the subject’s answers statistical distributions). In addition, we completed the mapping of colour name space by measuring the boundaries between chromatic colours and the achromatic centre. With these results we completed our parametric fuzzy-sets model of colour naming space. |
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CIC |
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CAT @ cat @ PPV2010 |
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1357 |
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Bogdan Raducanu; D. Gatica-Perez |
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Inferring competitive role patterns in reality TV show through nonverbal analysis |
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2012 |
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Multimedia Tools and Applications |
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MTAP |
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56 |
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1 |
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207-226 |
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This paper introduces a new facet of social media, namely that depicting social interaction. More concretely, we address this problem from the perspective of nonverbal behavior-based analysis of competitive meetings. For our study, we made use of “The Apprentice” reality TV show, which features a competition for a real, highly paid corporate job. Our analysis is centered around two tasks regarding a person's role in a meeting: predicting the person with the highest status, and predicting the fired candidates. We address this problem by adopting both supervised and unsupervised strategies. The current study was carried out using nonverbal audio cues. Our approach is based only on the nonverbal interaction dynamics during the meeting without relying on the spoken words. The analysis is based on two types of data: individual and relational measures. Results obtained from the analysis of a full season of the show are promising (up to 85.7% of accuracy in the first case and up to 92.8% in the second case). Our approach has been conveniently compared with the Influence Model, demonstrating its superiority. |
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1380-7501 |
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OR;MV |
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BCNPCL @ bcnpcl @ RaG2012 |
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1360 |
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Neus Salvatella; E Fernandez-Nofrerias; Francesco Ciompi; Oriol Rodriguez-Leor; H. Tizon; Xavier Carrillo; J. Mauri; Petia Radeva |
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Title |
Radial Artery Volume Changes After Administration Of Two Different Intra-arterial Drug Regimens. Assessment by Intravascular Ultrasound |
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Journal Article |
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2010 |
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Journal of the American College of Cardiology |
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JACC |
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56 |
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13s1 |
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B119 |
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BCNPCL @ bcnpcl @ SFC2010b |
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1364 |
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Ariel Amato; Mikhail Mozerov; Xavier Roca; Jordi Gonzalez |
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Title |
Robust Real-Time Background Subtraction Based on Local Neighborhood Patterns |
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Journal Article |
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2010 |
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EURASIP Journal on Advances in Signal Processing |
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EURASIPJ |
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7 |
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Article ID 901205
This paper describes an efficient background subtraction technique for detecting moving objects. The proposed approach is able to overcome difficulties like illumination changes and moving shadows. Our method introduces two discriminative features based on angular and modular patterns, which are formed by similarity measurement between two sets of RGB color vectors: one belonging to the background image and the other to the current image. We show how these patterns are used to improve foreground detection in the presence of moving shadows and in the case when there are strong similarities in color between background and foreground pixels. Experimental results over a collection of public and own datasets of real image sequences demonstrate that the proposed technique achieves a superior performance compared with state-of-the-art methods. Furthermore, both the low computational and space complexities make the presented algorithm feasible for real-time applications. |
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1110-8657 |
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ISE |
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ISE @ ise @ AMR2010 |
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1463 |
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Author |
Jaume Garcia; Debora Gil; Luis Badiella; Aura Hernandez-Sabate; Francesc Carreras; Sandra Pujades; Enric Marti |
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Title |
A Normalized Framework for the Design of Feature Spaces Assessing the Left Ventricular Function |
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Journal Article |
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2010 |
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IEEE Transactions on Medical Imaging |
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TMI |
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29 |
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3 |
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733-745 |
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A through description of the left ventricle functionality requires combining complementary regional scores. A main limitation is the lack of multiparametric normality models oriented to the assessment of regional wall motion abnormalities (RWMA). This paper covers two main topics involved in RWMA assessment. We propose a general framework allowing the fusion and comparison across subjects of different regional scores. Our framework is used to explore which combination of regional scores (including 2-D motion and strains) is better suited for RWMA detection. Our statistical analysis indicates that for a proper (within interobserver variability) identification of RWMA, models should consider motion and extreme strains. |
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0278-0062 |
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IAM @ iam @ GGH2010b |
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1507 |
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Author |
Debora Gil; Petia Radeva |
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Title |
Inhibition of false landmarks |
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Journal Article |
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2006 |
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Pattern Recognition Letters |
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PRL |
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27 |
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9 |
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1022-1030 |
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Corners and junctions are landmarks characterized by the lack of differentiability in the unit tangent to the image level curve. Detectors based on differential operators are not, by their own definition, the best posed as they require a higher degree of differentiability to yield a reliable response. We argue that a corner detector should be based on the degree of continuity of the tangent vector to the image level sets, work on the image domain and need no assumptions on neither the image local structure nor the particular geometry of the corner/junction. An operator measuring the degree of differentiability of the projection matrix on the image gradient fulfills the above requirements. Because using smoothing kernels leads to corner misplacement, we suggest an alternative fake response remover based on the receptive field inhibition of spurious details. The combination of both orientation discontinuity detection and noise inhibition produce our inhibition orientation energy (IOE) landmark locator. |
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Elsevier Science Inc. |
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New York, NY, USA |
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0167-8655 |
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IAM;MILAB |
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IAM @ iam @ GiR2006 |
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1529 |
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Author |
Debora Gil; Petia Radeva |
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Title |
Shape Restoration via a Regularized Curvature Flow |
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2004 |
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Journal of Mathematical Imaging and Vision |
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21 |
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3 |
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205-223 |
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Any image filtering operator designed for automatic shape restoration should satisfy robustness (whatever the nature and degree of noise is) as well as non-trivial smooth asymptotic behavior. Moreover, a stopping criterion should be determined by characteristics of the evolved image rather than dependent on the number of iterations. Among the several PDE based techniques, curvature flows appear to be highly reliable for strongly noisy images compared to image diffusion processes.
In the present paper, we introduce a regularized curvature flow (RCF) that admits non-trivial steady states. It is based on a measure of the local curve smoothness that takes into account regularity of the curve curvature and serves as stopping term in the mean curvature flow. We prove that this measure decreases over the orbits of RCF, which endows the method with a natural stop criterion in terms of the magnitude of this measure. Further, in its discrete version it produces steady states consisting of piece-wise regular curves. Numerical experiments made on synthetic shapes corrupted with different kinds of noise show the abilities and limitations of each of the current geometric flows and the benefits of RCF. Finally, we present results on real images that illustrate the usefulness of the present approach in practical applications. |
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IAM;MILAB |
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IAM @ iam @ GiR2004c |
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1532 |
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