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	Author	Carles Sanchez; Jorge Bernal; Debora Gil; F. Javier Sanchez
	Title	On-line lumen centre detection in gastrointestinal and respiratory endoscopy			Type	Conference Article
	Year	2013	Publication	Second International Workshop Clinical Image-Based Procedures	Abbreviated Journal
	Volume	8361	Issue		Pages	31-38
	Keywords	Lumen centre detection; Bronchoscopy; Colonoscopy
	Abstract	We present in this paper a novel lumen centre detection for gastrointestinal and respiratory endoscopic images. The proposed method is based on the appearance and geometry of the lumen, which we defined as the darkest image region which centre is a hub of image gradients. Experimental results validated on the first public annotated gastro-respiratory database prove the reliability of the method for a wide range of images (with precision over 95 %).
	Address	Nagoya; Japan; September 2013
	Corporate Author				Thesis
	Publisher	Springer International Publishing	Place of Publication		Editor	Erdt, Marius and Linguraru, Marius George and Oyarzun Laura, Cristina and Shekhar, Raj and Wesarg, Stefan and González Ballester, Miguel Angel and Drechsler, Klaus
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-319-05665-4	Medium
	Area	800	Expedition		Conference	CLIP
	Notes	MV; IAM; 600.047; 600.044; 600.060			Approved	no
	Call Number	Admin @ si @ SBG2013			Serial	2302
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	Author	Antonio Esteban Lansaque; Carles Sanchez; Agnes Borras; Marta Diez-Ferrer; Antoni Rosell; Debora Gil
	Title	Stable Anatomical Structure Tracking for video-bronchoscopy Navigation			Type	Conference Article
	Year	2016	Publication	19th International Conference on Medical Image Computing and Computer Assisted Intervention Workshops	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Lung cancer diagnosis; video-bronchoscopy; airway lumen detection; region tracking
	Abstract	Bronchoscopy allows to examine the patient airways for detection of lesions and sampling of tissues without surgery. A main drawback in lung cancer diagnosis is the diculty to check whether the exploration is following the correct path to the nodule that has to be biopsied. The most extended guidance uses uoroscopy which implies repeated radiation of clinical sta and patients. Alternatives such as virtual bronchoscopy or electromagnetic navigation are very expensive and not completely robust to blood, mocus or deformations as to be extensively used. We propose a method that extracts and tracks stable lumen regions at dierent levels of the bronchial tree. The tracked regions are stored in a tree that encodes the anatomical structure of the scene which can be useful to retrieve the path to the lesion that the clinician should follow to do the biopsy. We present a multi-expert validation of our anatomical landmark extraction in 3 intra-operative ultrathin explorations.
	Address	Athens; Greece; October 2016
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MICCAIW
	Notes	IAM; 600.075			Approved	no
	Call Number	Admin @ si @ LSB2016b			Serial	2857
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	Author	Guillermo Torres; Sonia Baeza; Carles Sanchez; Ignasi Guasch; Antoni Rosell; Debora Gil
	Title	An Intelligent Radiomic Approach for Lung Cancer Screening			Type	Journal Article
	Year	2022	Publication	Applied Sciences	Abbreviated Journal	APPLSCI
	Volume	12	Issue	3	Pages	1568
	Keywords	Lung cancer; Early diagnosis; Screening; Neural networks; Image embedding; Architecture optimization
	Abstract	The efficiency of lung cancer screening for reducing mortality is hindered by the high rate of false positives. Artificial intelligence applied to radiomics could help to early discard benign cases from the analysis of CT scans. The available amount of data and the fact that benign cases are a minority, constitutes a main challenge for the successful use of state of the art methods (like deep learning), which can be biased, over-fitted and lack of clinical reproducibility. We present an hybrid approach combining the potential of radiomic features to characterize nodules in CT scans and the generalization of the feed forward networks. In order to obtain maximal reproducibility with minimal training data, we propose an embedding of nodules based on the statistical significance of radiomic features for malignancy detection. This representation space of lesions is the input to a feed forward network, which architecture and hyperparameters are optimized using own-defined metrics of the diagnostic power of the whole system. Results of the best model on an independent set of patients achieve 100% of sensitivity and 83% of specificity (AUC = 0.94) for malignancy detection.
	Address	Jan 2022
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.139; 600.145			Approved	no
	Call Number	Admin @ si @ TBS2022			Serial	3699
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	Author	Marta Diez-Ferrer; Arturo Morales; Rosa Lopez Lisbona; Noelia Cubero; Cristian Tebe; Susana Padrones; Samantha Aso; Jordi Dorca; Debora Gil; Antoni Rosell
	Title	Ultrathin Bronchoscopy with and without Virtual Bronchoscopic Navigation: Influence of Segmentation on Diagnostic Yield			Type	Journal Article
	Year	2019	Publication	Respiration	Abbreviated Journal	RES
	Volume	97	Issue	3	Pages	252-258
	Keywords	Lung cancer; Peripheral lung lesion; Diagnosis; Bronchoscopy; Ultrathin bronchoscopy; Virtual bronchoscopic navigation
	Abstract	Background: Bronchoscopy is a safe technique for diagnosing peripheral pulmonary lesions (PPLs), and virtual bronchoscopic navigation (VBN) helps guide the bronchoscope to PPLs. Objectives: We aimed to compare the diagnostic yield of VBN-guided and unguided ultrathin bronchoscopy (UTB) and explore clinical and technical factors associated with better results. We developed a diagnostic algorithm for deciding whether to use VBN to reach PPLs or choose an alternative diagnostic approach. Methods: We compared diagnostic yield between VBN-UTB (prospective cases) and unguided UTB (historical controls) and analyzed the VBN-UTB subgroup to identify clinical and technical variables that could predict the success of VBN-UTB. Results: Fifty-five cases and 110 controls were included. The overall diagnostic yield did not differ between the VBN-guided and unguided arms (47 and 40%, respectively; p = 0.354). Although the yield was slightly higher for PPLs ≤20 mm in the VBN-UTB arm, the difference was not significant (p = 0.069). No other clinical characteristics were associated with a higher yield in a subgroup analysis, but an 85% diagnostic yield was observed when segmentation was optimal and the PPL was endobronchial (vs. 30% when segmentation was suboptimal and 20% when segmentation was optimal but the PPL was extrabronchial). Conclusions: VBN-guided UTB is not superior to unguided UTB. A greater impact of VBN-guided over unguided UTB is highly dependent on both segmentation quality and an endobronchial location of the PPL. Segmentation quality should be considered before starting a procedure, when an alternative technique that may improve yield can be chosen, saving time and resources.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.145; 600.139			Approved	no
	Call Number	Admin @ si @ DML2019			Serial	3134
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	Author	Mingyi Yang; Fei Yang; Luka Murn; Marc Gorriz Blanch; Juil Sock; Shuai Wan; Fuzheng Yang; Luis Herranz
	Title	Task-Switchable Pre-Processor for Image Compression for Multiple Machine Vision Tasks			Type	Journal Article
	Year	2024	Publication	IEEE Transactions on Circuits and Systems for Video Technology	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	M Yang, F Yang, L Murn, MG Blanch, J Sock, S Wan, F Yang, L Herranz
	Abstract	Visual content is increasingly being processed by machines for various automated content analysis tasks instead of being consumed by humans. Despite the existence of several compression methods tailored for machine tasks, few consider real-world scenarios with multiple tasks. In this paper, we aim to address this gap by proposing a task-switchable pre-processor that optimizes input images specifically for machine consumption prior to encoding by an off-the-shelf codec designed for human consumption. The proposed task-switchable pre-processor adeptly maintains relevant semantic information based on the specific characteristics of different downstream tasks, while effectively suppressing irrelevant information to reduce bitrate. To enhance the processing of semantic information for diverse tasks, we leverage pre-extracted semantic features to modulate the pixel-to-pixel mapping within the pre-processor. By switching between different modulations, multiple tasks can be seamlessly incorporated into the system. Extensive experiments demonstrate the practicality and simplicity of our approach. It significantly reduces the number of parameters required for handling multiple tasks while still delivering impressive performance. Our method showcases the potential to achieve efficient and effective compression for machine vision tasks, supporting the evolving demands of real-world applications.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	xxx			Approved	no
	Call Number	Admin @ si @ YYM2024			Serial	4007
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	Author	Zhen Xu; Sergio Escalera; Adrien Pavao; Magali Richard; Wei-Wei Tu; Quanming Yao; Huan Zhao; Isabelle Guyon
	Title	Codabench: Flexible, easy-to-use, and reproducible meta-benchmark platform			Type	Journal Article
	Year	2022	Publication	Patterns	Abbreviated Journal	PATTERNS
	Volume	3	Issue	7	Pages	100543
	Keywords	Machine learning; data science; benchmark platform; reproducibility; competitions
	Abstract	Obtaining a standardized benchmark of computational methods is a major issue in data-science communities. Dedicated frameworks enabling fair benchmarking in a unified environment are yet to be developed. Here, we introduce Codabench, a meta-benchmark platform that is open sourced and community driven for benchmarking algorithms or software agents versus datasets or tasks. A public instance of Codabench is open to everyone free of charge and allows benchmark organizers to fairly compare submissions under the same setting (software, hardware, data, algorithms), with custom protocols and data formats. Codabench has unique features facilitating easy organization of flexible and reproducible benchmarks, such as the possibility of reusing templates of benchmarks and supplying compute resources on demand. Codabench has been used internally and externally on various applications, receiving more than 130 users and 2,500 submissions. As illustrative use cases, we introduce four diverse benchmarks covering graph machine learning, cancer heterogeneity, clinical diagnosis, and reinforcement learning.
	Address	June 24, 2022
	Corporate Author				Thesis
	Publisher	Science Direct	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HuPBA			Approved	no
	Call Number	Admin @ si @ XEP2022			Serial	3764
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	Author	Frederic Sampedro; Sergio Escalera; Anna Puig
	Title	Iterative Multiclass Multiscale Stacked Sequential Learning: definition and application to medical volume segmentation			Type	Journal Article
	Year	2014	Publication	Pattern Recognition Letters	Abbreviated Journal	PRL
	Volume	46	Issue		Pages	1-10
	Keywords	Machine learning; Sequential learning; Multi-class problems; Contextual learning; Medical volume segmentation
	Abstract	In this work we present the iterative multi-class multi-scale stacked sequential learning framework (IMMSSL), a novel learning scheme that is particularly suited for medical volume segmentation applications. This model exploits the inherent voxel contextual information of the structures of interest in order to improve its segmentation performance results. Without any feature set or learning algorithm prior assumption, the proposed scheme directly seeks to learn the contextual properties of a region from the predicted classifications of previous classifiers within an iterative scheme. Performance results regarding segmentation accuracy in three two-class and multi-class medical volume datasets show a significant improvement with respect to state of the art alternatives. Due to its easiness of implementation and its independence of feature space and learning algorithm, the presented machine learning framework could be taken into consideration as a first choice in complex volume segmentation scenarios.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HuPBA;MILAB			Approved	no
	Call Number	Admin @ si @ SEP2014			Serial	2550
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	Author	Francesc Carreras; Jaume Garcia; Debora Gil; Sandra Pujadas; Chi ho Lion; R.Suarez-Arias; R.Leta; Xavier Alomar; Manuel Ballester; Guillem Pons-Llados
	Title	Left ventricular torsion and longitudinal shortening: two fundamental components of myocardial mechanics assessed by tagged cine-MRI in normal subjects			Type	Journal Article
	Year	2012	Publication	International Journal of Cardiovascular Imaging	Abbreviated Journal	IJCI
	Volume	28	Issue	2	Pages	273-284
	Keywords	Magnetic resonance imaging (MRI); Tagging MRI; Cardiac mechanics; Ventricular torsion
	Abstract	Cardiac magnetic resonance imaging (Cardiac MRI) has become a gold standard diagnostic technique for the assessment of cardiac mechanics, allowing the non-invasive calculation of left ventric- ular long axis longitudinal shortening (LVLS) and absolute myocardial torsion (AMT) between basal and apical left ventricular slices, a movement directly related to the helicoidal anatomic disposition of the myocardial fibers. The aim of this study is to determine AMT and LVLS behaviour and normal values from a group of healthy subjects. A group of 21 healthy volunteers (15 males) (age: 23–55 y.o., mean:30.7 ± 7.5) were prospectively included in an obser- vational study by Cardiac MRI. Left ventricular rotation (degrees) was calculated by custom-made software (Harmonic Phase Flow) in consecutive LV short axis planes tagged cine-MRI sequences. AMT was determined from the difference between basal and apical planes LV rotations. LVLS (%) was determined from the LV longitudinal and horizontal axis cine-MRI images. All the 21 cases studied were interpretable, although in three cases the value of the LV apical rotation could not be determined. The mean rotation of the basal and apical planes at end-systole were -3.71° ± 0.84° and 6.73° ± 1.69° (n:18) respectively, resulting in a LV mean AMT of 10.48° ± 1.63° (n:18). End-systolic mean LVLS was 19.07 ± 2.71%. Cardiac MRI allows for the calculation of AMT and LVLS, fundamental functional components of the ventricular twist mechanics conditioned, in turn, by the anatomical helical layout of the myocardial fibers. These values provide complementary information about systolic ventricular function in relation to the traditional parameters used in daily practice.
	Address
	Corporate Author				Thesis
	Publisher	Springer Netherlands	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1569-5794	ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ CGG2012			Serial	1496
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	Author	Marco Cotogni; Fei Yang; Claudio Cusano; Andrew Bagdanov; Joost Van de Weijer
	Title	Gated Class-Attention with Cascaded Feature Drift Compensation for Exemplar-free Continual Learning of Vision Transformers			Type	Miscellaneous
	Year	2022	Publication	Arxiv	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Marco Cotogni, Fei Yang, Claudio Cusano, Andrew D. Bagdanov, Joost van de Weijer
	Abstract	We propose a new method for exemplar-free class incremental training of ViTs. The main challenge of exemplar-free continual learning is maintaining plasticity of the learner without causing catastrophic forgetting of previously learned tasks. This is often achieved via exemplar replay which can help recalibrate previous task classifiers to the feature drift which occurs when learning new tasks. Exemplar replay, however, comes at the cost of retaining samples from previous tasks which for many applications may not be possible. To address the problem of continual ViT training, we first propose gated class-attention to minimize the drift in the final ViT transformer block. This mask-based gating is applied to class-attention mechanism of the last transformer block and strongly regulates the weights crucial for previous tasks. Importantly, gated class-attention does not require the task-ID during inference, which distinguishes it from other parameter isolation methods. Secondly, we propose a new method of feature drift compensation that accommodates feature drift in the backbone when learning new tasks. The combination of gated class-attention and cascaded feature drift compensation allows for plasticity towards new tasks while limiting forgetting of previous ones. Extensive experiments performed on CIFAR-100, Tiny-ImageNet and ImageNet100 demonstrate that our exemplar-free method obtains competitive results when compared to rehearsal based ViT methods.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	LAMP; no proj			Approved	no
	Call Number	Admin @ si @ CYC2022			Serial	3827
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	Author	Carlos Boned Riera; Oriol Ramos Terrades
	Title	Discriminative Neural Variational Model for Unbalanced Classification Tasks in Knowledge Graph			Type	Conference Article
	Year	2022	Publication	26th International Conference on Pattern Recognition	Abbreviated Journal
	Volume		Issue		Pages	2186-2191
	Keywords	Measurement; Couplings; Semantics; Ear; Benchmark testing; Data models; Pattern recognition
	Abstract	Nowadays the paradigm of link discovery problems has shown significant improvements on Knowledge Graphs. However, method performances are harmed by the unbalanced nature of this classification problem, since many methods are easily biased to not find proper links. In this paper we present a discriminative neural variational auto-encoder model, called DNVAE from now on, in which we have introduced latent variables to serve as embedding vectors. As a result, the learnt generative model approximate better the underlying distribution and, at the same time, it better differentiate the type of relations in the knowledge graph. We have evaluated this approach on benchmark knowledge graph and Census records. Results in this last data set are quite impressive since we reach the highest possible score in the evaluation metrics. However, further experiments are still needed to deeper evaluate the performance of the method in more challenging tasks.
	Address	Montreal; Quebec; Canada; August 2022
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICPR
	Notes	DAG; 600.121; 600.162			Approved	no
	Call Number	Admin @ si @ BoR2022			Serial	3741
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	Author	Yasuko Sugito; Javier Vazquez; Trevor Canham; Marcelo Bertalmio
	Title	Image quality evaluation in professional HDR/WCG production questions the need for HDR metrics			Type	Journal Article
	Year	2022	Publication	IEEE Transactions on Image Processing	Abbreviated Journal	TIP
	Volume	31	Issue		Pages	5163 - 5177
	Keywords	Measurement; Image color analysis; Image coding; Production; Dynamic range; Brightness; Extraterrestrial measurements
	Abstract	In the quality evaluation of high dynamic range and wide color gamut (HDR/WCG) images, a number of works have concluded that native HDR metrics, such as HDR visual difference predictor (HDR-VDP), HDR video quality metric (HDR-VQM), or convolutional neural network (CNN)-based visibility metrics for HDR content, provide the best results. These metrics consider only the luminance component, but several color difference metrics have been specifically developed for, and validated with, HDR/WCG images. In this paper, we perform subjective evaluation experiments in a professional HDR/WCG production setting, under a real use case scenario. The results are quite relevant in that they show, firstly, that the performance of HDR metrics is worse than that of a classic, simple standard dynamic range (SDR) metric applied directly to the HDR content; and secondly, that the chrominance metrics specifically developed for HDR/WCG imaging have poor correlation with observer scores and are also outperformed by an SDR metric. Based on these findings, we show how a very simple framework for creating color HDR metrics, that uses only luminance SDR metrics, transfer functions, and classic color spaces, is able to consistently outperform, by a considerable margin, state-of-the-art HDR metrics on a varied set of HDR content, for both perceptual quantization (PQ) and Hybrid Log-Gamma (HLG) encoding, luminance and chroma distortions, and on different color spaces of common use.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	600.161; 611.007			Approved	no
	Call Number	Admin @ si @ SVG2022			Serial	3683
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	Author	Ali Furkan Biten; Andres Mafla; Lluis Gomez; Dimosthenis Karatzas
	Title	Is An Image Worth Five Sentences? A New Look into Semantics for Image-Text Matching			Type	Conference Article
	Year	2022	Publication	Winter Conference on Applications of Computer Vision	Abbreviated Journal
	Volume		Issue		Pages	1391-1400
	Keywords	Measurement; Training; Integrated circuits; Annotations; Semantics; Training data; Semisupervised learning
	Abstract	The task of image-text matching aims to map representations from different modalities into a common joint visual-textual embedding. However, the most widely used datasets for this task, MSCOCO and Flickr30K, are actually image captioning datasets that offer a very limited set of relationships between images and sentences in their ground-truth annotations. This limited ground truth information forces us to use evaluation metrics based on binary relevance: given a sentence query we consider only one image as relevant. However, many other relevant images or captions may be present in the dataset. In this work, we propose two metrics that evaluate the degree of semantic relevance of retrieved items, independently of their annotated binary relevance. Additionally, we incorporate a novel strategy that uses an image captioning metric, CIDEr, to define a Semantic Adaptive Margin (SAM) to be optimized in a standard triplet loss. By incorporating our formulation to existing models, a large improvement is obtained in scenarios where available training data is limited. We also demonstrate that the performance on the annotated image-caption pairs is maintained while improving on other non-annotated relevant items when employing the full training set. The code for our new metric can be found at github. com/furkanbiten/ncsmetric and the model implementation at github. com/andrespmd/semanticadaptive_margin.
	Address	Virtual; Waikoloa; Hawai; USA; January 2022
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	WACV
	Notes	DAG; 600.155; 302.105;			Approved	no
	Call Number	Admin @ si @ BMG2022			Serial	3663
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	Author	Ali Furkan Biten; Lluis Gomez; Dimosthenis Karatzas
	Title	Let there be a clock on the beach: Reducing Object Hallucination in Image Captioning			Type	Conference Article
	Year	2022	Publication	Winter Conference on Applications of Computer Vision	Abbreviated Journal
	Volume		Issue		Pages	1381-1390
	Keywords	Measurement; Training; Visualization; Analytical models; Computer vision; Computational modeling; Training data
	Abstract	Explaining an image with missing or non-existent objects is known as object bias (hallucination) in image captioning. This behaviour is quite common in the state-of-the-art captioning models which is not desirable by humans. To decrease the object hallucination in captioning, we propose three simple yet efficient training augmentation method for sentences which requires no new training data or increase in the model size. By extensive analysis, we show that the proposed methods can significantly diminish our models’ object bias on hallucination metrics. Moreover, we experimentally demonstrate that our methods decrease the dependency on the visual features. All of our code, configuration files and model weights are available online.
	Address	Virtual; Waikoloa; Hawai; USA; January 2022
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	WACV
	Notes	DAG; 600.155; 302.105			Approved	no
	Call Number	Admin @ si @ BGK2022			Serial	3662
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	Author	Francesco Ciompi; Oriol Pujol; Carlo Gatta; Marina Alberti; Simone Balocco; Xavier Carrillo; J. Mauri; Petia Radeva
	Title	HoliMab: A Holistic Approach for Media-Adventitia Border Detection in Intravascular Ultrasound			Type	Journal Article
	Year	2012	Publication	Medical Image Analysis	Abbreviated Journal	MIA
	Volume	16	Issue	6	Pages	1085-1100
	Keywords	Media–Adventitia border detection; Intravascular ultrasound; Multi-Scale Stacked Sequential Learning; Error-correcting output codes; Holistic segmentation
	Abstract	We present a fully automatic methodology for the detection of the Media-Adventitia border (MAb) in human coronary artery in Intravascular Ultrasound (IVUS) images. A robust border detection is achieved by means of a holistic interpretation of the detection problem where the target object, i.e. the media layer, is considered as part of the whole vessel in the image and all the relationships between tissues are learnt. A fairly general framework exploiting multi-class tissue characterization as well as contextual information on the morphology and the appearance of the tissues is presented. The methodology is (i) validated through an exhaustive comparison with both Inter-observer variability on two challenging databases and (ii) compared with state-of-the-art methods for the detection of the MAb in IVUS. The obtained averaged values for the mean radial distance and the percentage of area difference are 0.211 mm and 10.1%, respectively. The applicability of the proposed methodology to clinical practice is also discussed.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB;HuPBA			Approved	no
	Call Number	Admin @ si @ CPG2012			Serial	1995
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	Author	Sergio Vera; Debora Gil; Agnes Borras; F. Javier Sanchez; Frederic Perez; Marius G. Linguraru; Miguel Angel Gonzalez Ballester
	Title	Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs			Type	Book Chapter
	Year	2012	Publication	Workshop on Computational and Clinical Applications in Abdominal Imaging	Abbreviated Journal
	Volume	7029	Issue		Pages	223–230
	Keywords	medial manifolds, abdomen.
	Abstract	Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations.
	Address	Toronto; Canada;
	Corporate Author				Thesis
	Publisher	Springer Link	Place of Publication	Berlin	Editor	H. Yoshida et al
	Language	English	Summary Language	English	Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-642-28556-1	Medium
	Area		Expedition		Conference	ABDI
	Notes	IAM;MV			Approved	no
	Call Number	IAM @ iam @ VGB2012			Serial	1834
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