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	Author	Mohamed Ali Souibgui; Alicia Fornes; Yousri Kessentini; Beata Megyesi
	Title	Few shots are all you need: A progressive learning approach for low resource handwritten text recognition			Type	Journal Article
	Year	2022	Publication	Pattern Recognition Letters	Abbreviated Journal	PRL
	Volume	160	Issue		Pages	43-49
	Keywords
	Abstract	Handwritten text recognition in low resource scenarios, such as manuscripts with rare alphabets, is a challenging problem. In this paper, we propose a few-shot learning-based handwriting recognition approach that significantly reduces the human annotation process, by requiring only a few images of each alphabet symbols. The method consists of detecting all the symbols of a given alphabet in a textline image and decoding the obtained similarity scores to the final sequence of transcribed symbols. Our model is first pretrained on synthetic line images generated from an alphabet, which could differ from the alphabet of the target domain. A second training step is then applied to reduce the gap between the source and the target data. Since this retraining would require annotation of thousands of handwritten symbols together with their bounding boxes, we propose to avoid such human effort through an unsupervised progressive learning approach that automatically assigns pseudo-labels to the unlabeled data. The evaluation on different datasets shows that our model can lead to competitive results with a significant reduction in human effort. The code will be publicly available in the following repository: https://github.com/dali92002/HTRbyMatching
	Address
	Corporate Author				Thesis
	Publisher	Elsevier	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.121; 600.162; 602.230			Approved	no
	Call Number	Admin @ si @ SFK2022			Serial	3736
Permanent link to this record



	Author	Joana Maria Pujadas-Mora; Alicia Fornes; Oriol Ramos Terrades; Josep Llados; Jialuo Chen; Miquel Valls-Figols; Anna Cabre
	Title	The Barcelona Historical Marriage Database and the Baix Llobregat Demographic Database. From Algorithms for Handwriting Recognition to Individual-Level Demographic and Socioeconomic Data			Type	Journal
	Year	2022	Publication	Historical Life Course Studies	Abbreviated Journal	HLCS
	Volume	12	Issue		Pages	99-132
	Keywords	Individual demographic databases; Computer vision, Record linkage; Social mobility; Inequality; Migration; Word spotting; Handwriting recognition; Local censuses; Marriage Licences
	Abstract	The Barcelona Historical Marriage Database (BHMD) gathers records of the more than 600,000 marriages celebrated in the Diocese of Barcelona and their taxation registered in Barcelona Cathedral's so-called Marriage Licenses Books for the long period 1451–1905 and the BALL Demographic Database brings together the individual information recorded in the population registers, censuses and fiscal censuses of the main municipalities of the county of Baix Llobregat (Barcelona). In this ongoing collection 263,786 individual observations have been assembled, dating from the period between 1828 and 1965 by December 2020. The two databases started as part of different interdisciplinary research projects at the crossroads of Historical Demography and Computer Vision. Their construction uses artificial intelligence and computer vision methods as Handwriting Recognition to reduce the time of execution. However, its current state still requires some human intervention which explains the implemented crowdsourcing and game sourcing experiences. Moreover, knowledge graph techniques have allowed the application of advanced record linkage to link the same individuals and families across time and space. Moreover, we will discuss the main research lines using both databases developed so far in historical demography.
	Address	June 23, 2022
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.121; 600.162; 602.230; 600.140			Approved	no
	Call Number	Admin @ si @ PFR2022			Serial	3737
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	Author	Asma Bensalah; Alicia Fornes; Cristina Carmona_Duarte; Josep Llados
	Title	Easing Automatic Neurorehabilitation via Classification and Smoothness Analysis			Type	Conference Article
	Year	2022	Publication	Intertwining Graphonomics with Human Movements. 20th International Conference of the International Graphonomics Society, IGS 2022	Abbreviated Journal
	Volume	13424	Issue		Pages	336-348
	Keywords	Neurorehabilitation; Upper-lim; Movement classification; Movement smoothness; Deep learning; Jerk
	Abstract	Assessing the quality of movements for post-stroke patients during the rehabilitation phase is vital given that there is no standard stroke rehabilitation plan for all the patients. In fact, it depends basically on the patient’s functional independence and its progress along the rehabilitation sessions. To tackle this challenge and make neurorehabilitation more agile, we propose an automatic assessment pipeline that starts by recognising patients’ movements by means of a shallow deep learning architecture, then measuring the movement quality using jerk measure and related measures. A particularity of this work is that the dataset used is clinically relevant, since it represents movements inspired from Fugl-Meyer a well common upper-limb clinical stroke assessment scale for stroke patients. We show that it is possible to detect the contrast between healthy and patients movements in terms of smoothness, besides achieving conclusions about the patients’ progress during the rehabilitation sessions that correspond to the clinicians’ findings about each case.
	Address	June 7-9, 2022, Las Palmas de Gran Canaria, Spain
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IGS
	Notes	DAG; 600.121; 600.162; 602.230; 600.140			Approved	no
	Call Number	Admin @ si @ BFC2022			Serial	3738
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	Author	Alicia Fornes; Asma Bensalah; Cristina Carmona_Duarte; Jialuo Chen; Miguel A. Ferrer; Andreas Fischer; Josep Llados; Cristina Martin; Eloy Opisso; Rejean Plamondon; Anna Scius-Bertrand; Josep Maria Tormos
	Title	The RPM3D Project: 3D Kinematics for Remote Patient Monitoring			Type	Conference Article
	Year	2022	Publication	Intertwining Graphonomics with Human Movements. 20th International Conference of the International Graphonomics Society, IGS 2022	Abbreviated Journal
	Volume	13424	Issue		Pages	217-226
	Keywords	Healthcare applications; Kinematic; Theory of Rapid Human Movements; Human activity recognition; Stroke rehabilitation; 3D kinematics
	Abstract	This project explores the feasibility of remote patient monitoring based on the analysis of 3D movements captured with smartwatches. We base our analysis on the Kinematic Theory of Rapid Human Movement. We have validated our research in a real case scenario for stroke rehabilitation at the Guttmann Institute (https://www.guttmann.com/en/) (neurorehabilitation hospital), showing promising results. Our work could have a great impact in remote healthcare applications, improving the medical efficiency and reducing the healthcare costs. Future steps include more clinical validation, developing multi-modal analysis architectures (analysing data from sensors, images, audio, etc.), and exploring the application of our technology to monitor other neurodegenerative diseases.
	Address	June 7-9, 2022, Las Palmas de Gran Canaria, Spain
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	IGS
	Notes	DAG; 600.121; 600.162; 602.230; 600.140			Approved	no
	Call Number	Admin @ si @ FBC2022			Serial	3739
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	Author	Arnau Baro; Pau Riba; Alicia Fornes
	Title	Musigraph: Optical Music Recognition Through Object Detection and Graph Neural Network			Type	Conference Article
	Year	2022	Publication	Frontiers in Handwriting Recognition. International Conference on Frontiers in Handwriting Recognition (ICFHR2022)	Abbreviated Journal
	Volume	13639	Issue		Pages	171-184
	Keywords	Object detection; Optical music recognition; Graph neural network
	Abstract	During the last decades, the performance of optical music recognition has been increasingly improving. However, and despite the 2-dimensional nature of music notation (e.g. notes have rhythm and pitch), most works treat musical scores as a sequence of symbols in one dimension, which make their recognition still a challenge. Thus, in this work we explore the use of graph neural networks for musical score recognition. First, because graphs are suited for n-dimensional representations, and second, because the combination of graphs with deep learning has shown a great performance in similar applications. Our methodology consists of: First, we will detect each isolated/atomic symbols (those that can not be decomposed in more graphical primitives) and the primitives that form a musical symbol. Then, we will build the graph taking as root node the notehead and as leaves those primitives or symbols that modify the note’s rhythm (stem, beam, flag) or pitch (flat, sharp, natural). Finally, the graph is translated into a human-readable character sequence for a final transcription and evaluation. Our method has been tested on more than five thousand measures, showing promising results.
	Address	December 04 – 07, 2022; Hyderabad, India
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICFHR
	Notes	DAG; 600.162; 600.140; 602.230			Approved	no
	Call Number	Admin @ si @ BRF2022b			Serial	3740
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	Author	Carlos Boned Riera; Oriol Ramos Terrades
	Title	Discriminative Neural Variational Model for Unbalanced Classification Tasks in Knowledge Graph			Type	Conference Article
	Year	2022	Publication	26th International Conference on Pattern Recognition	Abbreviated Journal
	Volume		Issue		Pages	2186-2191
	Keywords	Measurement; Couplings; Semantics; Ear; Benchmark testing; Data models; Pattern recognition
	Abstract	Nowadays the paradigm of link discovery problems has shown significant improvements on Knowledge Graphs. However, method performances are harmed by the unbalanced nature of this classification problem, since many methods are easily biased to not find proper links. In this paper we present a discriminative neural variational auto-encoder model, called DNVAE from now on, in which we have introduced latent variables to serve as embedding vectors. As a result, the learnt generative model approximate better the underlying distribution and, at the same time, it better differentiate the type of relations in the knowledge graph. We have evaluated this approach on benchmark knowledge graph and Census records. Results in this last data set are quite impressive since we reach the highest possible score in the evaluation metrics. However, further experiments are still needed to deeper evaluate the performance of the method in more challenging tasks.
	Address	Montreal; Quebec; Canada; August 2022
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICPR
	Notes	DAG; 600.121; 600.162			Approved	no
	Call Number	Admin @ si @ BoR2022			Serial	3741
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	Author	Patricia Suarez; Angel Sappa
	Title	A Generative Model for Guided Thermal Image Super-Resolution			Type	Conference Article
	Year	2024	Publication	19th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	This paper presents a novel approach for thermal super-resolution based on a fusion prior, low-resolution thermal image and H brightness channel of the corresponding visible spectrum image. The method combines bicubic interpolation of the ×8 scale target image with the brightness component. To enhance the guidance process, the original RGB image is converted to HSV, and the brightness channel is extracted. Bicubic interpolation is then applied to the low-resolution thermal image, resulting in a Bicubic-Brightness channel blend. This luminance-bicubic fusion is used as an input image to help the training process. With this fused image, the cyclic adversarial generative network obtains high-resolution thermal image results. Experimental evaluations show that the proposed approach significantly improves spatial resolution and pixel intensity levels compared to other state-of-the-art techniques, making it a promising method to obtain high-resolution thermal.
	Address	Roma; Italia; February 2024
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	VISAPP
	Notes	MSIAU			Approved	no
	Call Number	Admin @ si @ SuS2024			Serial	4002
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	Author	Hector Laria Mantecon; Kai Wang; Joost Van de Weijer; Bogdan Raducanu; Kai Wang
	Title	NeRF-Diffusion for 3D-Consistent Face Generation and Editing			Type	Conference Article
	Year	2024	Publication	19th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	Generating high-fidelity 3D-aware images without 3D supervision is a valuable capability in various applications. Current methods based on NeRF features, SDF information, or triplane features have limited variation after training. To address this, we propose a novel approach that combines pretrained models for shape and content generation. Our method leverages a pretrained Neural Radiance Field as a shape prior and a diffusion model for content generation. By conditioning the diffusion model with 3D features, we enhance its ability to generate novel views with 3D awareness. We introduce a consistency token shared between the NeRF module and the diffusion model to maintain 3D consistency during sampling. Moreover, our framework allows for text editing of 3D-aware image generation, enabling users to modify the style over 3D views while preserving semantic content. Our contributions include incorporating 3D awareness into a text-to-image model, addressing identity consistency in 3D view synthesis, and enabling text editing of 3D-aware image generation. We provide detailed explanations, including the shape prior based on the NeRF model and the content generation process using the diffusion model. We also discuss challenges such as shape consistency and sampling saturation. Experimental results demonstrate the effectiveness and visual quality of our approach.
	Address	Roma; Italia; February 2024
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	VISAPP
	Notes	LAMP			Approved	no
	Call Number	Admin @ si @ LWW2024			Serial	4003
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	Author	Penny Tarling; Mauricio Cantor; Albert Clapes; Sergio Escalera
	Title	Deep learning with self-supervision and uncertainty regularization to count fish in underwater images			Type	Journal Article
	Year	2022	Publication	PloS One	Abbreviated Journal	Plos
	Volume	17	Issue	5	Pages	e0267759
	Keywords
	Abstract	Effective conservation actions require effective population monitoring. However, accurately counting animals in the wild to inform conservation decision-making is difficult. Monitoring populations through image sampling has made data collection cheaper, wide-reaching and less intrusive but created a need to process and analyse this data efficiently. Counting animals from such data is challenging, particularly when densely packed in noisy images. Attempting this manually is slow and expensive, while traditional computer vision methods are limited in their generalisability. Deep learning is the state-of-the-art method for many computer vision tasks, but it has yet to be properly explored to count animals. To this end, we employ deep learning, with a density-based regression approach, to count fish in low-resolution sonar images. We introduce a large dataset of sonar videos, deployed to record wild Lebranche mullet schools (Mugil liza), with a subset of 500 labelled images. We utilise abundant unlabelled data in a self-supervised task to improve the supervised counting task. For the first time in this context, by introducing uncertainty quantification, we improve model training and provide an accompanying measure of prediction uncertainty for more informed biological decision-making. Finally, we demonstrate the generalisability of our proposed counting framework through testing it on a recent benchmark dataset of high-resolution annotated underwater images from varying habitats (DeepFish). From experiments on both contrasting datasets, we demonstrate our network outperforms the few other deep learning models implemented for solving this task. By providing an open-source framework along with training data, our study puts forth an efficient deep learning template for crowd counting aquatic animals thereby contributing effective methods to assess natural populations from the ever-increasing visual data.
	Address
	Corporate Author				Thesis
	Publisher	Public Library of Science	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HuPBA			Approved	no
	Call Number	Admin @ si @ TCC2022			Serial	3743
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	Author	Yecong Wan; Yuanshuo Cheng; Miingwen Shao; Jordi Gonzalez
	Title	Image rain removal and illumination enhancement done in one go			Type	Journal Article
	Year	2022	Publication	Knowledge-Based Systems	Abbreviated Journal	KBS
	Volume	252	Issue		Pages	109244
	Keywords
	Abstract	Rain removal plays an important role in the restoration of degraded images. Recently, CNN-based methods have achieved remarkable success. However, these approaches neglect that the appearance of real-world rain is often accompanied by low light conditions, which will further degrade the image quality, thereby hindering the restoration mission. Therefore, it is very indispensable to jointly remove the rain and enhance illumination for real-world rain image restoration. To this end, we proposed a novel spatially-adaptive network, dubbed SANet, which can remove the rain and enhance illumination in one go with the guidance of degradation mask. Meanwhile, to fully utilize negative samples, a contrastive loss is proposed to preserve more natural textures and consistent illumination. In addition, we present a new synthetic dataset, named DarkRain, to boost the development of rain image restoration algorithms in practical scenarios. DarkRain not only contains different degrees of rain, but also considers different lighting conditions, and more realistically simulates real-world rainfall scenarios. SANet is extensively evaluated on the proposed dataset and attains new state-of-the-art performance against other combining methods. Moreover, after a simple transformation, our SANet surpasses existing the state-of-the-art algorithms in both rain removal and low-light image enhancement.
	Address	Sept 2022
	Corporate Author				Thesis
	Publisher	Elsevier	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ISE; 600.157; 600.168			Approved	no
	Call Number	Admin @ si @ WCS2022			Serial	3744
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	Author	Lu Yu; Xialei Liu; Joost Van de Weijer
	Title	Self-Training for Class-Incremental Semantic Segmentation			Type	Journal Article
	Year	2022	Publication	IEEE Transactions on Neural Networks and Learning Systems	Abbreviated Journal	TNNLS
	Volume		Issue		Pages
	Keywords	Class-incremental learning; Self-training; Semantic segmentation.
	Abstract	In class-incremental semantic segmentation, we have no access to the labeled data of previous tasks. Therefore, when incrementally learning new classes, deep neural networks suffer from catastrophic forgetting of previously learned knowledge. To address this problem, we propose to apply a self-training approach that leverages unlabeled data, which is used for rehearsal of previous knowledge. Specifically, we first learn a temporary model for the current task, and then, pseudo labels for the unlabeled data are computed by fusing information from the old model of the previous task and the current temporary model. In addition, conflict reduction is proposed to resolve the conflicts of pseudo labels generated from both the old and temporary models. We show that maximizing self-entropy can further improve results by smoothing the overconfident predictions. Interestingly, in the experiments, we show that the auxiliary data can be different from the training data and that even general-purpose, but diverse auxiliary data can lead to large performance gains. The experiments demonstrate the state-of-the-art results: obtaining a relative gain of up to 114% on Pascal-VOC 2012 and 8.5% on the more challenging ADE20K compared to previous state-of-the-art methods.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	LAMP; 600.147; 611.008;			Approved	no
	Call Number	Admin @ si @ YLW2022			Serial	3745
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	Author	Aura Hernandez-Sabate; Jose Elias Yauri; Pau Folch; Daniel Alvarez; Debora Gil
	Title	EEG Dataset Collection for Mental Workload Predictions in Flight-Deck Environment			Type	Journal Article
	Year	2024	Publication	Sensors	Abbreviated Journal	SENS
	Volume	24	Issue	4	Pages	1174
	Keywords
	Abstract	High mental workload reduces human performance and the ability to correctly carry out complex tasks. In particular, aircraft pilots enduring high mental workloads are at high risk of failure, even with catastrophic outcomes. Despite progress, there is still a lack of knowledge about the interrelationship between mental workload and brain functionality, and there is still limited data on flight-deck scenarios. Although recent emerging deep-learning (DL) methods using physiological data have presented new ways to find new physiological markers to detect and assess cognitive states, they demand large amounts of properly annotated datasets to achieve good performance. We present a new dataset of electroencephalogram (EEG) recordings specifically collected for the recognition of different levels of mental workload. The data were recorded from three experiments, where participants were induced to different levels of workload through tasks of increasing cognition demand. The first involved playing the N-back test, which combines memory recall with arithmetical skills. The second was playing Heat-the-Chair, a serious game specifically designed to emphasize and monitor subjects under controlled concurrent tasks. The third was flying in an Airbus320 simulator and solving several critical situations. The design of the dataset has been validated on three different levels: (1) correlation of the theoretical difficulty of each scenario to the self-perceived difficulty and performance of subjects; (2) significant difference in EEG temporal patterns across the theoretical difficulties and (3) usefulness for the training and evaluation of AI models.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	Admin @ si @ HYF2024			Serial	4019
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	Author	Victor M. Campello; Carlos Martin-Isla; Cristian Izquierdo; Andrea Guala; Jose F. Rodriguez Palomares; David Vilades; Martin L. Descalzo; Mahir Karakas; Ersin Cavus; Zahra Zahra Raisi-Estabragh; Steffen E. Petersen; Sergio Escalera; Santiago Segui; Karim Lekadir
	Title	Minimising multi-centre radiomics variability through image normalisation: a pilot study			Type	Journal Article
	Year	2022	Publication	Scientific Reports	Abbreviated Journal	ScR
	Volume	12	Issue	1	Pages	12532
	Keywords
	Abstract	Radiomics is an emerging technique for the quantification of imaging data that has recently shown great promise for deeper phenotyping of cardiovascular disease. Thus far, the technique has been mostly applied in single-centre studies. However, one of the main difficulties in multi-centre imaging studies is the inherent variability of image characteristics due to centre differences. In this paper, a comprehensive analysis of radiomics variability under several image- and feature-based normalisation techniques was conducted using a multi-centre cardiovascular magnetic resonance dataset. 218 subjects divided into healthy (n = 112) and hypertrophic cardiomyopathy (n = 106, HCM) groups from five different centres were considered. First and second order texture radiomic features were extracted from three regions of interest, namely the left and right ventricular cavities and the left ventricular myocardium. Two methods were used to assess features’ variability. First, feature distributions were compared across centres to obtain a distribution similarity index. Second, two classification tasks were proposed to assess: (1) the amount of centre-related information encoded in normalised features (centre identification) and (2) the generalisation ability for a classification model when trained on these features (healthy versus HCM classification). The results showed that the feature-based harmonisation technique ComBat is able to remove the variability introduced by centre information from radiomic features, at the expense of slightly degrading classification performance. Piecewise linear histogram matching normalisation gave features with greater generalisation ability for classification ( balanced accuracy in between 0.78 ± 0.08 and 0.79 ± 0.09). Models trained with features from images without normalisation showed the worst performance overall ( balanced accuracy in between 0.45 ± 0.28 and 0.60 ± 0.22). In conclusion, centre-related information removal did not imply good generalisation ability for classification.
	Address	2022/07/22
	Corporate Author				Thesis
	Publisher	Springer Nature	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HuPBA			Approved	no
	Call Number	Admin @ si @ CMI2022			Serial	3749
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	Author	Ana Garcia Rodriguez; Yael Tudela; Henry Cordova; S. Carballal; I. Ordas; L. Moreira; E. Vaquero; O. Ortiz; L. Rivero; F. Javier Sanchez; Miriam Cuatrecasas; Maria Pellise; Jorge Bernal; Gloria Fernandez Esparrach
	Title	In vivo computer-aided diagnosis of colorectal polyps using white light endoscopy			Type	Journal Article
	Year	2022	Publication	Endoscopy International Open	Abbreviated Journal	ENDIO
	Volume	10	Issue	9	Pages	E1201-E1207
	Keywords
	Abstract	Background and study aims Artificial intelligence is currently able to accurately predict the histology of colorectal polyps. However, systems developed to date use complex optical technologies and have not been tested in vivo. The objective of this study was to evaluate the efficacy of a new deep learning-based optical diagnosis system, ATENEA, in a real clinical setting using only high-definition white light endoscopy (WLE) and to compare its performance with endoscopists. Methods ATENEA was prospectively tested in real life on consecutive polyps detected in colorectal cancer screening colonoscopies at Hospital Clínic. No images were discarded, and only WLE was used. The in vivo ATENEA's prediction (adenoma vs non-adenoma) was compared with the prediction of four staff endoscopists without specific training in optical diagnosis for the study purposes. Endoscopists were blind to the ATENEA output. Histology was the gold standard. Results Ninety polyps (median size: 5 mm, range: 2-25) from 31 patients were included of which 69 (76.7 %) were adenomas. ATENEA correctly predicted the histology in 63 of 69 (91.3 %, 95 % CI: 82 %-97 %) adenomas and 12 of 21 (57.1 %, 95 % CI: 34 %-78 %) non-adenomas while endoscopists made correct predictions in 52 of 69 (75.4 %, 95 % CI: 60 %-85 %) and 20 of 21 (95.2 %, 95 % CI: 76 %-100 %), respectively. The global accuracy was 83.3 % (95 % CI: 74%-90 %) and 80 % (95 % CI: 70 %-88 %) for ATENEA and endoscopists, respectively. Conclusion ATENEA can accurately be used for in vivo characterization of colorectal polyps, enabling the endoscopist to make direct decisions. ATENEA showed a global accuracy similar to that of endoscopists despite an unsatisfactory performance for non-adenomatous lesions.
	Address	2022 Sep 14
	Corporate Author				Thesis
	Publisher	PMID	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	ISE; 600.157			Approved	no
	Call Number	Admin @ si @ GTC2022b			Serial	3752
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	Author	Iban Berganzo-Besga; Hector A. Orengo; Felipe Lumbreras; Paloma Aliende; Monica N. Ramsey
	Title	Automated detection and classification of multi-cell Phytoliths using Deep Learning-Based Algorithms			Type	Journal Article
	Year	2022	Publication	Journal of Archaeological Science	Abbreviated Journal	JArchSci
	Volume	148	Issue		Pages	105654
	Keywords
	Abstract	This paper presents an algorithm for automated detection and classification of multi-cell phytoliths, one of the major components of many archaeological and paleoenvironmental deposits. This identification, based on phytolith wave pattern, is made using a pretrained VGG19 deep learning model. This approach has been tested in three key phytolith genera for the study of agricultural origins in Near East archaeology: Avena, Hordeum and Triticum. Also, this classification has been validated at species-level using Triticum boeoticum and dicoccoides images. Due to the diversity of microscopes, cameras and chemical treatments that can influence images of phytolith slides, three types of data augmentation techniques have been implemented: rotation of the images at 45-degree angles, random colour and brightness jittering, and random blur/sharpen. The implemented workflow has resulted in an overall accuracy of 93.68% for phytolith genera, improving previous attempts. The algorithm has also demonstrated its potential to automatize the classification of phytoliths species with an overall accuracy of 100%. The open code and platforms employed to develop the algorithm assure the method's accessibility, reproducibility and reusability.
	Address	December 2022
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MSIAU; MACO; 600.167			Approved	no
	Call Number	Admin @ si @ BOL2022			Serial	3753
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