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Author |
Ferran Poveda; Debora Gil; Enric Marti; Albert Andaluz; Manel Ballester;Francesc Carreras Costa |
![download PDF file pdf](img/file_PDF.gif)
![goto web page (via DOI) doi](img/doi.gif)
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Title |
Helical structure of the cardiac ventricular anatomy assessed by Diffusion Tensor Magnetic Resonance Imaging multi-resolution tractography |
Type |
Journal Article |
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Year |
2013 |
Publication |
Revista Española de Cardiología |
Abbreviated Journal |
REC |
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Volume |
66 |
Issue |
10 |
Pages |
782-790 |
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Keywords |
Heart;Diffusion magnetic resonance imaging;Diffusion tractography;Helical heart;Myocardial ventricular band. |
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Abstract |
Deep understanding of myocardial structure linking morphology and function of the heart would unravel crucial knowledge for medical and surgical clinical procedures and studies. Several conceptual models of myocardial fiber organization have been proposed but the lack of an automatic and objective methodology prevented an agreement. We sought to deepen in this knowledge through advanced computer graphic representations of the myocardial fiber architecture by diffusion tensor magnetic resonance imaging (DT-MRI).
We performed automatic tractography reconstruction of unsegmented DT-MRI canine heart datasets coming from the public database of the Johns Hopkins University. Full scale tractographies have been build with 200 seeds and are composed by streamlines computed on the vectorial field of primary eigenvectors given at the diffusion tensor volumes. Also, we introduced a novel multi-scale visualization technique in order to obtain a simplified tractography. This methodology allowed to keep the main geometric features of the fiber tracts, making easier to decipher the main properties of the architectural organization of the heart.
On the analysis of the output from our tractographic representations we found exact correlation with low-level details of myocardial architecture, but also with the more abstract conceptualization of a continuous helical ventricular myocardial fiber array.
Objective analysis of myocardial architecture by an automated method, including the entire myocardium and using several 3D levels of complexity, reveals a continuous helical myocardial fiber arrangement of both right and left ventricles, supporting the anatomical model of the helical ventricular myocardial band described by Torrent-Guasp. |
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Elsevier |
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IAM; 600.044; 600.060 |
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IAM @ iam @ PGM2013 |
Serial |
2194 |
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Author |
David Roche; Debora Gil; Jesus Giraldo |
![goto web page (via DOI) doi](img/doi.gif)
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Title |
Mechanistic analysis of the function of agonists and allosteric modulators: Reconciling two-state and operational models |
Type |
Journal Article |
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Year |
2013 |
Publication |
British Journal of Pharmacology |
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BJP |
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Volume |
169 |
Issue |
6 |
Pages |
1189-202 |
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Abstract |
Two-state and operational models of both agonism and allosterism are compared to identify and characterize common pharmacological parameters. To account for the receptor-dependent basal response, constitutive receptor activity is considered in the operational models. By arranging two-state models as the fraction of active receptors and operational models as the fractional response relative to the maximum effect of the system, a one-by-one correspondence between parameters is found. The comparative analysis allows a better understanding of complex allosteric interactions. In particular, the inclusion of constitutive receptor activity in the operational model of allosterism allows the characterization of modulators able to lower the basal response of the system; that is, allosteric modulators with negative intrinsic efficacy. Theoretical simulations and overall goodness of fit of the models to simulated data suggest that it is feasible to apply the models to experimental data and constitute one step forward in receptor theory formalism. |
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IAM; 600.044; 605.203 |
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IAM @ iam @ RGG2013b |
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2195 |
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Author |
Joan M. Nuñez; Debora Gil; Fernando Vilariño |
![goto web page (via DOI) doi](img/doi.gif)
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Title |
Finger joint characterization from X-ray images for rheymatoid arthritis assessment |
Type |
Conference Article |
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Year |
2013 |
Publication |
6th International Conference on Biomedical Electronics and Devices |
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288-292 |
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Keywords |
Rheumatoid Arthritis; X-Ray; Hand Joint; Sclerosis; Sharp Van der Heijde |
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Abstract |
In this study we propose amodular systemfor automatic rheumatoid arthritis assessment which provides a joint space width measure. A hand joint model is proposed based on the accurate analysis of a X-ray finger joint image sample set. This model shows that the sclerosis and the lower bone are the main necessary features in order to perform a proper finger joint characterization. We propose sclerosis and lower bone detection methods as well as the experimental setup necessary for its performance assessment. Our characterization is used to propose and compute a joint space width score which is shown to be related to the different degrees of arthritis. This assertion is verified by comparing our proposed score with Sharp Van der Heijde score, confirming that the lower our score is the more advanced is the patient affection. |
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Barcelona; February 2013 |
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SciTePress |
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800 |
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BIODEVICES |
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IAM;MV; 600.057; 600.054;SIAI |
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no |
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Call Number |
IAM @ iam @ NGV2013 |
Serial |
2196 |
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Author |
Joan M. Nuñez; Jorge Bernal; F. Javier Sanchez; Fernando Vilariño |
![download PDF file pdf](img/file_PDF.gif)
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Title |
Blood Vessel Characterization in Colonoscopy Images to Improve Polyp Localization |
Type |
Conference Article |
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Year |
2013 |
Publication |
Proceedings of the International Conference on Computer Vision Theory and Applications |
Abbreviated Journal |
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Volume |
1 |
Issue |
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Pages |
162-171 |
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Keywords |
Colonoscopy; Blood vessel; Linear features; Valley detection |
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Abstract |
This paper presents an approach to mitigate the contribution of blood vessels to the energy image used at different tasks of automatic colonoscopy image analysis. This goal is achieved by introducing a characterization of endoluminal scene objects which allows us to differentiate between the trace of 2-dimensional visual objects,such as vessels, and shades from 3-dimensional visual objects, such as folds. The proposed characterization is based on the influence that the object shape has in the resulting visual feature, and it leads to the development of a blood vessel attenuation algorithm. A database consisting of manually labelled masks was built in order to test the performance of our method, which shows an encouraging success in blood vessel mitigation while keeping other structures intact. Moreover, by extending our method to the only available polyp localization
algorithm tested on a public database, blood vessel mitigation proved to have a positive influence on the overall performance. |
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Barcelona; February 2013 |
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SciTePress |
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800 |
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VISIGRAPP |
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Notes |
MV; 600.054; 600.057;SIAI |
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no |
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Call Number |
IAM @ iam @ NBS2013 |
Serial |
2198 |
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Author |
Marina Alberti |
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Title |
Detection and Alignment of Vascular Structures in Intravascular Ultrasound using Pattern Recognition Techniques |
Type |
Book Whole |
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Year |
2013 |
Publication |
PhD Thesis, Universitat de Barcelona-CVC |
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In this thesis, several methods for the automatic analysis of Intravascular Ultrasound
(IVUS) sequences are presented, aimed at assisting physicians in the diagnosis, the assessment of the intervention and the monitoring of the patients with coronary disease.
The basis for the developed frameworks are machine learning, pattern recognition and
image processing techniques.
First, a novel approach for the automatic detection of vascular bifurcations in
IVUS is presented. The task is addressed as a binary classication problem (identifying bifurcation and non-bifurcation angular sectors in the sequence images). The
multiscale stacked sequential learning algorithm is applied, to take into account the
spatial and temporal context in IVUS sequences, and the results are rened using
a-priori information about branching dimensions and geometry. The achieved performance is comparable to intra- and inter-observer variability.
Then, we propose a novel method for the automatic non-rigid alignment of IVUS
sequences of the same patient, acquired at dierent moments (before and after percutaneous coronary intervention, or at baseline and follow-up examinations). The
method is based on the description of the morphological content of the vessel, obtained by extracting temporal morphological proles from the IVUS acquisitions, by
means of methods for segmentation, characterization and detection in IVUS. A technique for non-rigid sequence alignment – the Dynamic Time Warping algorithm -
is applied to the proles and adapted to the specic clinical problem. Two dierent robust strategies are proposed to address the partial overlapping between frames
of corresponding sequences, and a regularization term is introduced to compensate
for possible errors in the prole extraction. The benets of the proposed strategy
are demonstrated by extensive validation on synthetic and in-vivo data. The results
show the interest of the proposed non-linear alignment and the clinical value of the
method.
Finally, a novel automatic approach for the extraction of the luminal border in
IVUS images is presented. The method applies the multiscale stacked sequential
learning algorithm and extends it to 2-D+T, in a rst classication phase (the identi-
cation of lumen and non-lumen regions of the images), while an active contour model
is used in a second phase, to identify the lumen contour. The method is extended
to the longitudinal dimension of the sequences and it is validated on a challenging
data-set. |
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Barcelona |
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Ph.D. thesis |
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Ediciones Graficas Rey |
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Editor |
Simone Balocco;Petia Radeva |
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MILAB |
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no |
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Call Number |
Admin @ si @ Alb2013 |
Serial |
2215 |
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Author |
Juan Ramon Terven Salinas; Joaquin Salas; Bogdan Raducanu |
![download PDF file pdf](img/file_PDF.gif)
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Title |
Estado del Arte en Sistemas de Vision Artificial para Personas Invidentes |
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2013 |
Publication |
Komputer Sapiens |
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1 |
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20-25 |
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OR;MV |
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Admin @ si @ TSR2013 |
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2231 |
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Author |
David Vazquez; Jiaolong Xu; Sebastian Ramos; Antonio Lopez; Daniel Ponsa |
![download PDF file pdf](img/file_PDF.gif)
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Title |
Weakly Supervised Automatic Annotation of Pedestrian Bounding Boxes |
Type |
Conference Article |
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Year |
2013 |
Publication |
CVPR Workshop on Ground Truth – What is a good dataset? |
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706 - 711 |
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Pedestrian Detection; Domain Adaptation |
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Abstract |
Among the components of a pedestrian detector, its trained pedestrian classifier is crucial for achieving the desired performance. The initial task of the training process consists in collecting samples of pedestrians and background, which involves tiresome manual annotation of pedestrian bounding boxes (BBs). Thus, recent works have assessed the use of automatically collected samples from photo-realistic virtual worlds. However, learning from virtual-world samples and testing in real-world images may suffer the dataset shift problem. Accordingly, in this paper we assess an strategy to collect samples from the real world and retrain with them, thus avoiding the dataset shift, but in such a way that no BBs of real-world pedestrians have to be provided. In particular, we train a pedestrian classifier based on virtual-world samples (no human annotation required). Then, using such a classifier we collect pedestrian samples from real-world images by detection. After, a human oracle rejects the false detections efficiently (weak annotation). Finally, a new classifier is trained with the accepted detections. We show that this classifier is competitive with respect to the counterpart trained with samples collected by manually annotating hundreds of pedestrian BBs. |
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Portland; Oregon; June 2013 |
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IEEE |
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English |
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English |
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CVPRW |
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ADAS; 600.054; 600.057; 601.217 |
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ADAS @ adas @ VXR2013a |
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2219 |
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Author |
Jiaolong Xu; David Vazquez; Sebastian Ramos; Antonio Lopez; Daniel Ponsa |
![download PDF file pdf](img/file_PDF.gif)
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Title |
Adapting a Pedestrian Detector by Boosting LDA Exemplar Classifiers |
Type |
Conference Article |
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Year |
2013 |
Publication |
CVPR Workshop on Ground Truth – What is a good dataset? |
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688 - 693 |
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Pedestrian Detection; Domain Adaptation |
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Training vision-based pedestrian detectors using synthetic datasets (virtual world) is a useful technique to collect automatically the training examples with their pixel-wise ground truth. However, as it is often the case, these detectors must operate in real-world images, experiencing a significant drop of their performance. In fact, this effect also occurs among different real-world datasets, i.e. detectors' accuracy drops when the training data (source domain) and the application scenario (target domain) have inherent differences. Therefore, in order to avoid this problem, it is required to adapt the detector trained with synthetic data to operate in the real-world scenario. In this paper, we propose a domain adaptation approach based on boosting LDA exemplar classifiers from both virtual and real worlds. We evaluate our proposal on multiple real-world pedestrian detection datasets. The results show that our method can efficiently adapt the exemplar classifiers from virtual to real world, avoiding drops in average precision over the 15%. |
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Portland; oregon; June 2013 |
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ADAS; 600.054; 600.057; 601.217 |
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yes |
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XVR2013; ADAS @ adas @ xvr2013a |
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2220 |
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Author |
Ivet Rafegas |
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Title |
Exploring Low-Level Vision Models. Case Study: Saliency Prediction |
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Report |
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2013 |
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CVC Technical Report |
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175 |
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Master's thesis |
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CIC |
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Admin @ si @ Raf2013 |
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2409 |
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Author |
Francesco Brughi |
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Title |
Artistic Heritage Motive Retrieval: an Explorative Study |
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Report |
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2013 |
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CVC Technical Report |
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176 |
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IAM |
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Admin @ si @ Bru2013 |
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2410 |
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Author |
Ferran Poveda |
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Title |
Computer Graphics and Vision Techniques for the Study of the Muscular Fiber Architecture of the Myocardium |
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Book Whole |
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2013 |
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PhD Thesis, Universitat Autonoma de Barcelona-CVC |
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Ph.D. thesis |
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Debora Gil;Enric Marti |
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IAM |
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Admin @ si @ Pov2013 |
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2417 |
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Author |
Miquel Ferrer; I. Bardaji; Ernest Valveny; Dimosthenis Karatzas; Horst Bunke |
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Title |
Median Graph Computation by Means of Graph Embedding into Vector Spaces |
Type |
Book Chapter |
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Year |
2013 |
Publication |
Graph Embedding for Pattern Analysis |
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45-72 |
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In pattern recognition [8, 14], a key issue to be addressed when designing a system is how to represent input patterns. Feature vectors is a common option. That is, a set of numerical features describing relevant properties of the pattern are computed and arranged in a vector form. The main advantages of this kind of representation are computational simplicity and a well sound mathematical foundation. Thus, a large number of operations are available to work with vectors and a large repository of algorithms for pattern analysis and classification exist. However, the simple structure of feature vectors might not be the best option for complex patterns where nonnumerical features or relations between different parts of the pattern become relevant. |
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Springer New York |
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Yun Fu; Yungian Ma |
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978-1-4614-4456-5 |
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DAG |
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no |
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Admin @ si @ FBV2013 |
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2421 |
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Mirko Arnold; Anarta Ghosh; Glen Doherty; Hugh Mulcahy; Stephen Patchett; Gerard Lacey |
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Towards Automatic Direct Observation of Procedure and Skill (DOPS) in Colonoscopy |
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Conference Article |
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2013 |
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Proceedings of the International Conference on Computer Vision Theory and Applications |
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48-53 |
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800 |
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VISIGRAPP |
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fernando @ fernando @ |
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2427 |
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Christophe Rigaud; Dimosthenis Karatzas; Jean-Christophe Burie; Jean-Marc Ogier |
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Title |
Speech balloon contour classification in comics |
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2013 |
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10th IAPR International Workshop on Graphics Recognition |
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Comic books digitization combined with subsequent comic book understanding create a variety of new applications, including mobile reading and data mining. Document understanding in this domain is challenging as comics are semi-structured documents, combining semantically important graphical and textual parts. In this work we detail a novel approach for classifying speech balloon in scanned comics book pages based on their contour time series. |
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Bethlehem; PA; USA; August 2013 |
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GREC |
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DAG; 600.056 |
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Admin @ si @ RKB2013 |
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2429 |
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Katerine Diaz; Francesc J. Ferri |
![goto web page url](img/www.gif)
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Title |
Extensiones del método de vectores comunes discriminantes Aplicadas a la clasificación de imágenes |
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2013 |
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Extensiones del método de vectores comunes discriminantes Aplicadas a la clasificación de imágenes |
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Los métodos basados en subespacios son una herramienta muy utilizada en aplicaciones de visión por computador. Aquí se presentan y validan algunos algoritmos que hemos propuesto en este campo de investigación. El primer algoritmo está relacionado con una extensión del método de vectores comunes discriminantes con kernel, que reinterpreta el espacio nulo de la matriz de dispersión intra-clase del conjunto de entrenamiento para obtener las características discriminantes. Dentro de los métodos basados en subespacios existen diferentes tipos de entrenamiento. Uno de los más populares, pero no por ello uno de los más eficientes, es el aprendizaje por lotes. En este tipo de aprendizaje, todas las muestras del conjunto de entrenamiento tienen que estar disponibles desde el inicio. De este modo, cuando nuevas muestras se ponen a disposición del algoritmo, el sistema tiene que ser reentrenado de nuevo desde cero. Una alternativa a este tipo de entrenamiento es el aprendizaje incremental. Aquí se proponen diferentes algoritmos incrementales del método de vectores comunes discriminantes. |
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978-3-639-55339-0 |
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ADAS |
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Admin @ si @ DiF2013 |
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2440 |
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