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Anjan Dutta, Pau Riba, Josep Llados, & Alicia Fornes. (2017). Pyramidal Stochastic Graphlet Embedding for Document Pattern Classification. In 14th International Conference on Document Analysis and Recognition (pp. 33–38).
Abstract: Document pattern classification methods using graphs have received a lot of attention because of its robust representation paradigm and rich theoretical background. However, the way of preserving and the process for delineating documents with graphs introduce noise in the rendition of underlying data, which creates instability in the graph representation. To deal with such unreliability in representation, in this paper, we propose Pyramidal Stochastic Graphlet Embedding (PSGE).
Given a graph representing a document pattern, our method first computes a graph pyramid by successively reducing the base graph. Once the graph pyramid is computed, we apply Stochastic Graphlet Embedding (SGE) for each level of the pyramid and combine their embedded representation to obtain a global delineation of the original graph. The consideration of pyramid of graphs rather than just a base graph extends the representational power of the graph embedding, which reduces the instability caused due to noise and distortion. When plugged with support
vector machine, our proposed PSGE has outperformed the state-of-the-art results in recognition of handwritten words as well as graphical symbols
Keywords: graph embedding; hierarchical graph representation; graph clustering; stochastic graphlet embedding; graph classification
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Joan Serrat, Felipe Lumbreras, Francisco Blanco, Manuel Valiente, & Montserrat Lopez-Mesas. (2017). myStone: A system for automatic kidney stone classification. ESA - Expert Systems with Applications, 89, 41–51.
Abstract: Kidney stone formation is a common disease and the incidence rate is constantly increasing worldwide. It has been shown that the classification of kidney stones can lead to an important reduction of the recurrence rate. The classification of kidney stones by human experts on the basis of certain visual color and texture features is one of the most employed techniques. However, the knowledge of how to analyze kidney stones is not widespread, and the experts learn only after being trained on a large number of samples of the different classes. In this paper we describe a new device specifically designed for capturing images of expelled kidney stones, and a method to learn and apply the experts knowledge with regard to their classification. We show that with off the shelf components, a carefully selected set of features and a state of the art classifier it is possible to automate this difficult task to a good degree. We report results on a collection of 454 kidney stones, achieving an overall accuracy of 63% for a set of eight classes covering almost all of the kidney stones taxonomy. Moreover, for more than 80% of samples the real class is the first or the second most probable class according to the system, being then the patient recommendations for the two top classes similar. This is the first attempt towards the automatic visual classification of kidney stones, and based on the current results we foresee better accuracies with the increase of the dataset size.
Keywords: Kidney stone; Optical device; Computer vision; Image classification
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Pierdomenico Fiadino, Victor Ponce, Juan Antonio Torrero-Gonzalez, & Marc Torrent-Moreno. (2017). Call Detail Records for Human Mobility Studies: Taking Stock of the Situation in the “Always Connected Era". In Workshop on Big Data Analytics and Machine Learning for Data Communication Networks (pp. 43–48).
Abstract: The exploitation of cellular network data for studying human mobility has been a popular research topic in the last decade. Indeed, mobile terminals could be considered ubiquitous sensors that allow the observation of human movements on large scale without the need of relying on non-scalable techniques, such as surveys, or dedicated and expensive monitoring infrastructures. In particular, Call Detail Records (CDRs), collected by operators for billing purposes,
have been extensively employed due to their rather large availability, compared to other types of cellular data (e.g., signaling). Despite the interest aroused around this topic, the research community has generally agreed about the scarcity of information provided by CDRs: the position of mobile terminals is logged when some kind of activity (calls, SMS, data connections) occurs, which translates in a picture of mobility somehow biased by the activity degree of users.
By studying two datasets collected by a Nation-wide operator in 2014 and 2016, we show that the situation has drastically changed in terms of data volume and quality. The increase of flat data plans and the higher penetration of “
always connected” terminals have driven up the number of recorded CDRs, providing higher temporal accuracy for users’ locations.
Keywords: mobile networks; call detail records; human mobility
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Katerine Diaz, Jesus Martinez del Rincon, & Aura Hernandez-Sabate. (2017). Decremental generalized discriminative common vectors applied to images classification. KBS - Knowledge-Based Systems, 131, 46–57.
Abstract: In this paper, a novel decremental subspace-based learning method called Decremental Generalized Discriminative Common Vectors method (DGDCV) is presented. The method makes use of the concept of decremental learning, which we introduce in the field of supervised feature extraction and classification. By efficiently removing unnecessary data and/or classes for a knowledge base, our methodology is able to update the model without recalculating the full projection or accessing to the previously processed training data, while retaining the previously acquired knowledge. The proposed method has been validated in 6 standard face recognition datasets, showing a considerable computational gain without compromising the accuracy of the model.
Keywords: Decremental learning; Generalized Discriminative Common Vectors; Feature extraction; Linear subspace methods; Classification
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Karim Lekadir, Alfiia Galimzianova, Angels Betriu, Maria del Mar Vila, Laura Igual, Daniel L. Rubin, et al. (2017). A Convolutional Neural Network for Automatic Characterization of Plaque Composition in Carotid Ultrasound. J-BHI - IEEE Journal Biomedical and Health Informatics, 21(1), 48–55.
Abstract: Characterization of carotid plaque composition, more specifically the amount of lipid core, fibrous tissue, and calcified tissue, is an important task for the identification of plaques that are prone to rupture, and thus for early risk estimation of cardiovascular and cerebrovascular events. Due to its low costs and wide availability, carotid ultrasound has the potential to become the modality of choice for plaque characterization in clinical practice. However, its significant image noise, coupled with the small size of the plaques and their complex appearance, makes it difficult for automated techniques to discriminate between the different plaque constituents. In this paper, we propose to address this challenging problem by exploiting the unique capabilities of the emerging deep learning framework. More specifically, and unlike existing works which require a priori definition of specific imaging features or thresholding values, we propose to build a convolutional neural network (CNN) that will automatically extract from the images the information that is optimal for the identification of the different plaque constituents. We used approximately 90 000 patches extracted from a database of images and corresponding expert plaque characterizations to train and to validate the proposed CNN. The results of cross-validation experiments show a correlation of about 0.90 with the clinical assessment for the estimation of lipid core, fibrous cap, and calcified tissue areas, indicating the potential of deep learning for the challenging task of automatic characterization of plaque composition in carotid ultrasound.
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Mariella Dimiccoli, Marc Bolaños, Estefania Talavera, Maedeh Aghaei, Stavri G. Nikolov, & Petia Radeva. (2017). SR-Clustering: Semantic Regularized Clustering for Egocentric Photo Streams Segmentation. CVIU - Computer Vision and Image Understanding, 155, 55–69.
Abstract: While wearable cameras are becoming increasingly popular, locating relevant information in large unstructured collections of egocentric images is still a tedious and time consuming processes. This paper addresses the problem of organizing egocentric photo streams acquired by a wearable camera into semantically meaningful segments. First, contextual and semantic information is extracted for each image by employing a Convolutional Neural Networks approach. Later, by integrating language processing, a vocabulary of concepts is defined in a semantic space. Finally, by exploiting the temporal coherence in photo streams, images which share contextual and semantic attributes are grouped together. The resulting temporal segmentation is particularly suited for further analysis, ranging from activity and event recognition to semantic indexing and summarization. Experiments over egocentric sets of nearly 17,000 images, show that the proposed approach outperforms state-of-the-art methods.
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Mireia Sole, Joan Blanco, Debora Gil, G. Fonseka, Richard Frodsham, Oliver Valero, et al. (2017). Is there a pattern of Chromosome territoriality along mice spermatogenesis? In 3rd Spanish MeioNet Meeting Abstract Book (pp. 55–56).
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Mireia Forns-Nadal, Federico Sem, Anna Mane, Laura Igual, Dani Guinart, & Oscar Vilarroya. (2017). Increased Nucleus Accumbens Volume in First-Episode Psychosis. PRN - Psychiatry Research-Neuroimaging, 263, 57–60.
Abstract: Nucleus accumbens has been reported as a key structure in the neurobiology of schizophrenia. Studies analyzing structural abnormalities have shown conflicting results, possibly related to confounding factors. We investigated the nucleus accumbens volume using manual delimitation in first-episode psychosis (FEP) controlling for age, cannabis use and medication. Thirty-one FEP subjects who were naive or minimally exposed to antipsychotics and a control group were MRI scanned and clinically assessed from baseline to 6 months of follow-up. FEP showed increased relative and total accumbens volumes. Clinical correlations with negative symptoms, duration of untreated psychosis and cannabis use were not significant.
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Lluis Gomez, & Dimosthenis Karatzas. (2017). TextProposals: a Text‐specific Selective Search Algorithm for Word Spotting in the Wild. PR - Pattern Recognition, 70, 60–74.
Abstract: Motivated by the success of powerful while expensive techniques to recognize words in a holistic way (Goel et al., 2013; Almazán et al., 2014; Jaderberg et al., 2016) object proposals techniques emerge as an alternative to the traditional text detectors. In this paper we introduce a novel object proposals method that is specifically designed for text. We rely on a similarity based region grouping algorithm that generates a hierarchy of word hypotheses. Over the nodes of this hierarchy it is possible to apply a holistic word recognition method in an efficient way.
Our experiments demonstrate that the presented method is superior in its ability of producing good quality word proposals when compared with class-independent algorithms. We show impressive recall rates with a few thousand proposals in different standard benchmarks, including focused or incidental text datasets, and multi-language scenarios. Moreover, the combination of our object proposals with existing whole-word recognizers (Almazán et al., 2014; Jaderberg et al., 2016) shows competitive performance in end-to-end word spotting, and, in some benchmarks, outperforms previously published results. Concretely, in the challenging ICDAR2015 Incidental Text dataset, we overcome in more than 10% F-score the best-performing method in the last ICDAR Robust Reading Competition (Karatzas, 2015). Source code of the complete end-to-end system is available at https://github.com/lluisgomez/TextProposals.
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Frederic Sampedro, Anna Domenech, Sergio Escalera, & Ignasi Carrio. (2017). Computing quantitative indicators of structural renal damage in pediatric DMSA scans. REMNIM - Revista Española de Medicina Nuclear e Imagen Molecular, 36(2), 72–77.
Abstract: OBJECTIVES:
The proposal and implementation of a computational framework for the quantification of structural renal damage from 99mTc-dimercaptosuccinic acid (DMSA) scans. The aim of this work is to propose, implement, and validate a computational framework for the quantification of structural renal damage from DMSA scans and in an observer-independent manner.
MATERIALS AND METHODS:
From a set of 16 pediatric DMSA-positive scans and 16 matched controls and using both expert-guided and automatic approaches, a set of image-derived quantitative indicators was computed based on the relative size, intensity and histogram distribution of the lesion. A correlation analysis was conducted in order to investigate the association of these indicators with other clinical data of interest in this scenario, including C-reactive protein (CRP), white cell count, vesicoureteral reflux, fever, relative perfusion, and the presence of renal sequelae in a 6-month follow-up DMSA scan.
RESULTS:
A fully automatic lesion detection and segmentation system was able to successfully classify DMSA-positive from negative scans (AUC=0.92, sensitivity=81% and specificity=94%). The image-computed relative size of the lesion correlated with the presence of fever and CRP levels (p<0.05), and a measurement derived from the distribution histogram of the lesion obtained significant performance results in the detection of permanent renal damage (AUC=0.86, sensitivity=100% and specificity=75%).
CONCLUSIONS:
The proposal and implementation of a computational framework for the quantification of structural renal damage from DMSA scans showed a promising potential to complement visual diagnosis and non-imaging indicators.
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Mireia Sole, Joan Blanco, Debora Gil, G. Fonseka, Richard Frodsham, Francesca Vidal, et al. (2017). Noves perspectives en l estudi de la territorialitat cromosomica de cel·lules germinals masculines: estudis tridimensionals. JBR - Biologia de la Reproduccio, 73–78.
Abstract: In somatic cells, chromosomes occupy specific nuclear regions called chromosome territories which are involved in the
maintenance and regulation of the genome. Preliminary data in male germ cells also suggest the importance of chromosome
territoriality in cell functionality. Nevertheless, the specific characteristics of testicular tissue (presence of different
cell types with different morphological characteristics, in different stages of development and with different ploidy)
makes difficult to achieve conclusive results. In this study we have developed a methodology to approach the threedimensional
study of all chromosome territories in male germ cells from C57BL/6J mice (Mus musculus). The method
includes the following steps: i) Optimized cell fixation to obtain an optimal preservation of the three-dimensionality cell
morphology, ii) Chromosome identification by FISH (Chromoprobe Multiprobe® OctoChrome™ Murine System; Cytocell)
and confocal microscopy (TCS-SP5, Leica Microsystems), iii) Cell type identification by immunofluorescence
iv) Image analysis using Matlab scripts, v) Numerical data extraction related to chromosome features, chromosome
radial position and chromosome relative position. This methodology allows the unequivocally identification and the
analysis of the chromosome territories of all spermatogenic stages. Results will provide information about the features
that determine chromosomal position, preferred associations between chromosomes, and the relationship between chromosome
positioning and genome regulation.
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Lluis Pere de las Heras, Oriol Ramos Terrades, & Josep Llados. (2017). Ontology-Based Understanding of Architectural Drawings. In International Workshop on Graphics Recognition. GREC 2015.Graphic Recognition. Current Trends and Challenges (Vol. 9657, pp. 75–85). LNCS.
Abstract: In this paper we present a knowledge base of architectural documents aiming at improving existing methods of floor plan classification and understanding. It consists of an ontological definition of the domain and the inclusion of real instances coming from both, automatically interpreted and manually labeled documents. The knowledge base has proven to be an effective tool to structure our knowledge and to easily maintain and upgrade it. Moreover, it is an appropriate means to automatically check the consistency of relational data and a convenient complement of hard-coded knowledge interpretation systems.
Keywords: Graphics recognition; Floor plan analysi; Domain ontology
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Marc Bolaños, Mariella Dimiccoli, & Petia Radeva. (2017). Towards Storytelling from Visual Lifelogging: An Overview. THMS - IEEE Transactions on Human-Machine Systems, 47(1), 77–90.
Abstract: Visual lifelogging consists of acquiring images that capture the daily experiences of the user by wearing a camera over a long period of time. The pictures taken offer considerable potential for knowledge mining concerning how people live their lives, hence, they open up new opportunities for many potential applications in fields including healthcare, security, leisure and
the quantified self. However, automatically building a story from a huge collection of unstructured egocentric data presents major challenges. This paper provides a thorough review of advances made so far in egocentric data analysis, and in view of the current state of the art, indicates new lines of research to move us towards storytelling from visual lifelogging.
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Lluis Gomez, Anguelos Nicolaou, & Dimosthenis Karatzas. (2017). Improving patch‐based scene text script identification with ensembles of conjoined networks. PR - Pattern Recognition, 67, 85–96.
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Lasse Martensson, Anders Hast, & Alicia Fornes. (2017). Word Spotting as a Tool for Scribal Attribution. In 2nd Conference of the association of Digital Humanities in the Nordic Countries (pp. 87–89).
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