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Ivet Rafegas, & Maria Vanrell. (2016). Colour Visual Coding in trained Deep Neural Networks. In European Conference on Visual Perception.
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Arash Akbarinia, & C. Alejandro Parraga. (2016). Dynamically Adjusted Surround Contrast Enhances Boundary Detection, European Conference on Visual Perception. In European Conference on Visual Perception.
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Arash Akbarinia, C. Alejandro Parraga, Marta Exposito, Bogdan Raducanu, & Xavier Otazu. (2017). Can biological solutions help computers detect symmetry? In 40th European Conference on Visual Perception.
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C. Alejandro Parraga, Xavier Otazu, & Arash Akbarinia. (2019). Modelling symmetry perception with banks of quadrature convolutional Gabor kernels. In 42nd edition of the European Conference on Visual Perception (p. 224).
Abstract: Mirror symmetry is a property most likely to be encountered in animals than in medium scale vegetation or inanimate objects in the natural world. This might be the reason why the human visual system has evolved to detect it quickly and robustly. Indeed, the perception of symmetry assists higher-level visual processing that are crucial for survival such as target recognition and identification irrespective of position and location. Although the task of detecting symmetrical objects seems effortless to us, it is very challenging for computers (to the extent that it has been proposed as a robust “captcha” by Funk & Liu in 2016). Indeed, the exact mechanism of symmetry detection in primates is not well understood: fMRI studies have shown that symmetrical shapes activate specific higher-level areas of the visual cortex (Sasaki et al.; 2005) and similarly, a large body of psychophysical experiments suggest that the symmetry perception is critically influenced by low-level mechanisms (Treder; 2010). In this work we attempt to find plausible low-level mechanisms that might form the basis for symmetry perception. Our simple model is made from banks of (i) odd-symmetric Gabors (resembling edge-detecting V1 neurons); and (ii) banks of larger odd- and even-symmetric Gabors (resembling higher visual cortex neurons), that pool signals from the 'edge image'. As reported previously (Akbarinia et al, ECVP2017), the convolution of the symmetrical lines with the two Gabor kernels of alternative phase produces a minimum in one and a maximum in the other (Osorio; 1996), and the rectification and combination of these signals create lines which hint of mirror symmetry in natural images. We improved the algorithm by combining these signals across several spatial scales. Our preliminary results suggest that such multiscale combination of convolutional operations might form the basis for much of the operation of the HVS in terms of symmetry detection and representation.
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Florin Popescu, Stephane Ayache, Sergio Escalera, Xavier Baro, Cecile Capponi, Patrick Panciatici, et al. (2016). From geospatial observations of ocean currents to causal predictors of spatio-economic activity using computer vision and machine learning. In European Geosciences Union General Assembly (Vol. 18).
Abstract: The big data transformation currently revolutionizing science and industry forges novel possibilities in multimodal analysis scarcely imaginable only a decade ago. One of the important economic and industrial problems that stand to benefit from the recent expansion of data availability and computational prowess is the prediction of electricity demand and renewable energy generation. Both are correlates of human activity: spatiotemporal energy consumption patterns in society are a factor of both demand (weather dependent) and supply, which determine cost – a relation expected to strengthen along with increasing renewable energy dependence. One of the main drivers of European weather patterns is the activity of the Atlantic Ocean and in particular its dominant Northern Hemisphere current: the Gulf Stream. We choose this particular current as a test case in part due to larger amount of relevant data and scientific literature available for refinement of analysis techniques.
This data richness is due not only to its economic importance but also to its size being clearly visible in radar and infrared satellite imagery, which makes it easier to detect using Computer Vision (CV). The power of CV techniques makes basic analysis thus developed scalable to other smaller and less known, but still influential, currents, which are not just curves on a map, but complex, evolving, moving branching trees in 3D projected onto a 2D image.
We investigate means of extracting, from several image modalities (including recently available Copernicus radar and earlier Infrared satellites), a parameterized presentation of the state of the Gulf Stream and its environment that is useful as feature space representation in a machine learning context, in this case with the EC’s H2020-sponsored ‘See.4C’ project, in the context of which data scientists may find novel predictors of spatiotemporal energy flow. Although automated extractors of Gulf Stream position exist, they differ in methodology and result. We shall attempt to extract more complex feature representation including branching points, eddies and parameterized changes in transport and velocity. Other related predictive features will be similarly developed, such as inference of deep water flux long the current path and wider spatial scale features such as Hough transform, surface turbulence indicators and temperature gradient indexes along with multi-time scale analysis of ocean height and temperature dynamics. The geospatial imaging and ML community may therefore benefit from a baseline of open-source techniques useful and expandable to other related prediction and/or scientific analysis tasks.
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Jaume Garcia, Albert Andaluz, Debora Gil, & Francesc Carreras. (2010). Decoupled External Forces in a Predictor-Corrector Segmentation Scheme for LV Contours in Tagged MR Images. In 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (pp. 4805–4808).
Abstract: Computation of functional regional scores requires proper identification of LV contours. On one hand, manual segmentation is robust, but it is time consuming and requires high expertise. On the other hand, the tag pattern in TMR sequences is a problem for automatic segmentation of LV boundaries. We propose a segmentation method based on a predictorcorrector (Active Contours – Shape Models) scheme. Special stress is put in the definition of the AC external forces. First, we introduce a semantic description of the LV that discriminates myocardial tissue by using texture and motion descriptors. Second, in order to ensure convergence regardless of the initial contour, the external energy is decoupled according to the orientation of the edges in the image potential. We have validated the model in terms of error in segmented contours and accuracy of regional clinical scores.
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Jorge Bernal, F. Javier Sanchez, & Fernando Vilariño. (2013). Impact of Image Preprocessing Methods on Polyp Localization in Colonoscopy Frames. In 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (pp. 7350–7354).
Abstract: In this paper we present our image preprocessing methods as a key part of our automatic polyp localization scheme. These methods are used to assess the impact of different endoluminal scene elements when characterizing polyps. More precisely we tackle the influence of specular highlights, blood vessels and black mask surrounding the scene. Experimental results prove that the appropriate handling of these elements leads to a great improvement in polyp localization results.
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Marta Ligero, Guillermo Torres, Carles Sanchez, Katerine Diaz, Raquel Perez, & Debora Gil. (2019). Selection of Radiomics Features based on their Reproducibility. In 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (pp. 403–408).
Abstract: Dimensionality reduction is key to alleviate machine learning artifacts in clinical applications with Small Sample Size (SSS) unbalanced datasets. Existing methods rely on either the probabilistic distribution of training data or the discriminant power of the reduced space, disregarding the impact of repeatability and uncertainty in features.In the present study is proposed the use of reproducibility of radiomics features to select features with high inter-class correlation coefficient (ICC). The reproducibility includes the variability introduced in the image acquisition, like medical scans acquisition parameters and convolution kernels, that affects intensity-based features and tumor annotations made by physicians, that influences morphological descriptors of the lesion.For the reproducibility of radiomics features three studies were conducted on cases collected at Vall Hebron Oncology Institute (VHIO) on responders to oncology treatment. The studies focused on the variability due to the convolution kernel, image acquisition parameters, and the inter-observer lesion identification. The features selected were those features with a ICC higher than 0.7 in the three studies.The selected features based on reproducibility were evaluated for lesion malignancy classification using a different database. Results show better performance compared to several state-of-the-art methods including Principal Component Analysis (PCA), Kernel Discriminant Analysis via QR decomposition (KDAQR), LASSO, and an own built Convolutional Neural Network.
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Debora Gil, Aura Hernandez-Sabate, Antoni Carol, Oriol Rodriguez, & Petia Radeva. (2005). A Deterministic-Statistic Adventitia Detection in IVUS Images. In ESC Congress. ,Sweden (EU).
Abstract: Plaque analysis in IVUS planes needs accurate intima and adventitia models. Large variety in adventitia descriptors difficulties its detection and motivates using a classification strategy for selecting points on the structure. Whatever the set of descriptors used, the selection stage suffers from fake responses due to noise and uncompleted true curves. In order to smooth background noise while strengthening responses, we apply a restricted anisotropic filter that homogenizes grey levels along the image significant structures. Candidate points are extracted by means of a simple semi supervised adaptive classification of the filtered image response to edge and calcium detectors. The final model is obtained by interpolating the former line segments with an anisotropic contour closing technique based on functional extension principles.
Keywords: Electron microscopy; Unbending; 2D crystal; Interpolation; Approximation
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Oriol Rodriguez-Leon, Josefina Mauri, Eduard Fernandez-Nofrerias, C.Garcia, R.Villuendas, Vicente del Valle, et al. (2003). Reconstruction of a spatio-temporal model of the intima layer from intravascular ultrasound sequences. European Heart Journal, .
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Quentin Angermann, Jorge Bernal, Cristina Sanchez Montes, Maroua Hammami, Gloria Fernandez Esparrach, Xavier Dray, et al. (2017). Clinical Usability Quantification Of a Real-Time Polyp Detection Method In Videocolonoscopy. In 25th United European Gastroenterology Week.
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Cristina Sanchez Montes, F. Javier Sanchez, Cristina Rodriguez de Miguel, Henry Cordova, Jorge Bernal, Maria Lopez Ceron, et al. (2017). Histological Prediction Of Colonic Polyps By Computer Vision. Preliminary Results. In 25th United European Gastroenterology Week.
Abstract: during colonoscopy, clinicians perform visual inspection of the polyps to predict histology. Kudo’s pit pattern classification is one of the most commonly used for optical diagnosis. These surface patterns present a contrast with respect to their neighboring regions and they can be considered as bright regions in the image that can attract the attention of computational methods.
Keywords: polyps; histology; computer vision
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Jorge Bernal, Fernando Vilariño, F. Javier Sanchez, M. Arnold, Anarta Ghosh, & Gerard Lacey. (2014). Experts vs Novices: Applying Eye-tracking Methodologies in Colonoscopy Video Screening for Polyp Search. In 2014 Symposium on Eye Tracking Research and Applications (pp. 223–226).
Abstract: We present in this paper a novel study aiming at identifying the differences in visual search patterns between physicians of diverse levels of expertise during the screening of colonoscopy videos. Physicians were clustered into two groups -experts and novices- according to the number of procedures performed, and fixations were captured by an eye-tracker device during the task of polyp search in different video sequences. These fixations were integrated into heat maps, one for each cluster. The obtained maps were validated over a ground truth consisting of a mask of the polyp, and the comparison between experts and novices was performed by using metrics such as reaction time, dwelling time and energy concentration ratio. Experimental results show a statistically significant difference between experts and novices, and the obtained maps show to be a useful tool for the characterisation of the behaviour of each group.
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Cristina Palmero, Oleg V Komogortsev, Sergio Escalera, & Sachin S Talathi. (2023). Multi-Rate Sensor Fusion for Unconstrained Near-Eye Gaze Estimation. In Proceedings of the 2023 Symposium on Eye Tracking Research and Applications (pp. 1–8).
Abstract: The power requirements of video-oculography systems can be prohibitive for high-speed operation on portable devices. Recently, low-power alternatives such as photosensors have been evaluated, providing gaze estimates at high frequency with a trade-off in accuracy and robustness. Potentially, an approach combining slow/high-fidelity and fast/low-fidelity sensors should be able to exploit their complementarity to track fast eye motion accurately and robustly. To foster research on this topic, we introduce OpenSFEDS, a near-eye gaze estimation dataset containing approximately 2M synthetic camera-photosensor image pairs sampled at 500 Hz under varied appearance and camera position. We also formulate the task of sensor fusion for gaze estimation, proposing a deep learning framework consisting in appearance-based encoding and temporal eye-state dynamics. We evaluate several single- and multi-rate fusion baselines on OpenSFEDS, achieving 8.7% error decrease when tracking fast eye movements with a multi-rate approach vs. a gaze forecasting approach operating with a low-speed sensor alone.
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Sergio Escalera, Josep Moya, Laura Igual, Veronica Violant, & Maria Teresa Anguera. (2012). Automatic Human Behavior Analysis in ADHD. In Eunethydis 2nd International ADHD Conference.
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