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	Author	Oriol Ramos Terrades; N. Serrano; Albert Gordo; Ernest Valveny; Alfons Juan-Ciscar
	Title	Interactive-predictive detection of handwritten text blocks			Type	Conference Article
	Year	2010	Publication	17th Document Recognition and Retrieval Conference, part of the IS&T-SPIE Electronic Imaging Symposium	Abbreviated Journal
	Volume	7534	Issue		Pages	75340Q–75340Q–10
	Keywords
	Abstract	A method for text block detection is introduced for old handwritten documents. The proposed method takes advantage of sequential book structure, taking into account layout information from pages previously transcribed. This glance at the past is used to predict the position of text blocks in the current page with the help of conventional layout analysis methods. The method is integrated into the GIDOC prototype: a first attempt to provide integrated support for interactive-predictive page layout analysis, text line detection and handwritten text transcription. Results are given in a transcription task on a 764-page Spanish manuscript from 1891.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	DRR
	Notes	DAG			Approved	no
	Call Number	DAG @ dag @ TSG2010			Serial	1479
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	Author	Albert Gordo; Florent Perronnin
	Title	A Bag-of-Pages Approach to Unordered Multi-Page Document Classification			Type	Conference Article
	Year	2010	Publication	20th International Conference on Pattern Recognition	Abbreviated Journal
	Volume		Issue		Pages	1920–1923
	Keywords
	Abstract	We consider the problem of classifying documents containing multiple unordered pages. For this purpose, we propose a novel bag-of-pages document representation. To represent a document, one assigns every page to a prototype in a codebook of pages. This leads to a histogram representation which can then be fed to any discriminative classifier. We also consider several refinements over this initial approach. We show on two challenging datasets that the proposed approach significantly outperforms a baseline system.
	Address	Istanbul (Turkey)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1051-4651	ISBN	978-1-4244-7542-1	Medium
	Area		Expedition		Conference	ICPR
	Notes	DAG			Approved	no
	Call Number	Admin @ si @ GoP2010			Serial	1480
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	Author	Albert Andaluz; Francesc Carreras; Debora Gil; Jaume Garcia
	Title	Una aplicació amigable pel càlcul de indicadors clínics del ventricle esquerre			Type	Miscellaneous
	Year	2010	Publication	Forum Biocat 2010	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Lonja de Mar,Barcelona (Spain)
	Corporate Author	CVC			Thesis
	Publisher	Biocat	Place of Publication	Barcelona	Editor
	Language	Catalan	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ ACG2010			Serial	1483
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	Author	Jaume Garcia; Albert Andaluz; Debora Gil; Francesc Carreras
	Title	Decoupled External Forces in a Predictor-Corrector Segmentation Scheme for LV Contours in Tagged MR Images			Type	Conference Article
	Year	2010	Publication	32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society	Abbreviated Journal
	Volume		Issue		Pages	4805-4808
	Keywords
	Abstract	Computation of functional regional scores requires proper identification of LV contours. On one hand, manual segmentation is robust, but it is time consuming and requires high expertise. On the other hand, the tag pattern in TMR sequences is a problem for automatic segmentation of LV boundaries. We propose a segmentation method based on a predictorcorrector (Active Contours – Shape Models) scheme. Special stress is put in the definition of the AC external forces. First, we introduce a semantic description of the LV that discriminates myocardial tissue by using texture and motion descriptors. Second, in order to ensure convergence regardless of the initial contour, the external energy is decoupled according to the orientation of the edges in the image potential. We have validated the model in terms of error in segmented contours and accuracy of regional clinical scores.
	Address	Buenos Aires (Argentina)
	Corporate Author	IEEE EMB			Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1557-170X	ISBN	978-1-4244-4123-5	Medium
	Area		Expedition		Conference	EMBC
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GAG2010			Serial	1514
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	Author	Jaume Garcia; Debora Gil; Aura Hernandez-Sabate
	Title	Endowing Canonical Geometries to Cardiac Structures			Type	Book Chapter
	Year	2010	Publication	Statistical Atlases And Computational Models Of The Heart	Abbreviated Journal
	Volume	6364	Issue		Pages	124-133
	Keywords
	Abstract	International conference on Cardiac electrophysiological simulation challenge In this paper, we show that canonical (shape-based) geometries can be endowed to cardiac structures using tubular coordinates defined over their medial axis. We give an analytic formulation of these geometries by means of B-Splines. Since B-Splines present vector space structure PCA can be applied to their control points and statistical models relating boundaries and the interior of the anatomical structures can be derived. We demonstrate the applicability in two cardiac structures, the 3D Left Ventricular volume, and the 2D Left-Right ventricle set in 2D Short Axis view.
	Address
	Corporate Author				Thesis
	Publisher	Springer Berlin / Heidelberg	Place of Publication		Editor	Camara, O.; Pop, M.; Rhode, K.; Sermesant, M.; Smith, N.; Young, A.
	Language		Summary Language		Original Title
	Series Editor		Series Title	Lecture Notes in Computer Science	Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGH2010b			Serial	1515
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	Author	Debora Gil; Jaume Garcia; Aura Hernandez-Sabate; Enric Marti
	Title	Manifold parametrization of the left ventricle for a statistical modelling of its complete anatomy			Type	Conference Article
	Year	2010	Publication	8th Medical Imaging	Abbreviated Journal
	Volume	7623	Issue	762304	Pages	304
	Keywords
	Abstract	Distortion of Left Ventricle (LV) external anatomy is related to some dysfunctions, such as hypertrophy. The architecture of myocardial fibers determines LV electromechanical activation patterns as well as mechanics. Thus, their joined modelling would allow the design of specific interventions (such as peacemaker implantation and LV remodelling) and therapies (such as resynchronization). On one hand, accurate modelling of external anatomy requires either a dense sampling or a continuous infinite dimensional approach, which requires non-Euclidean statistics. On the other hand, computation of fiber models requires statistics on Riemannian spaces. Most approaches compute separate statistical models for external anatomy and fibers architecture. In this work we propose a general mathematical framework based on differential geometry concepts for computing a statistical model including, both, external and fiber anatomy. Our framework provides a continuous approach to external anatomy supporting standard statistics. We also provide a straightforward formula for the computation of the Riemannian fiber statistics. We have applied our methodology to the computation of complete anatomical atlas of canine hearts from diffusion tensor studies. The orientation of fibers over the average external geometry agrees with the segmental description of orientations reported in the literature.
	Address
	Corporate Author				Thesis
	Publisher	SPIE	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	SPIE
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ GGH2010a			Serial	1522
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	Author	Aura Hernandez-Sabate; Monica Mitiko; Sergio Shiguemi; Debora Gil
	Title	A validation protocol for assessing cardiac phase retrieval in IntraVascular UltraSound			Type	Conference Article
	Year	2010	Publication	Computing in Cardiology	Abbreviated Journal
	Volume	37	Issue		Pages	899-902
	Keywords
	Abstract	A good reliable approach to cardiac triggering is of utmost importance in obtaining accurate quantitative results of atherosclerotic plaque burden from the analysis of IntraVascular UltraSound. Although, in the last years, there has been an increase in research of methods for retrospective gating, there is no general consensus in a validation protocol. Many methods are based on quality assessment of longitudinal cuts appearance and those reporting quantitative numbers do not follow a standard protocol. Such heterogeneity in validation protocols makes faithful comparison across methods a difficult task. We propose a validation protocol based on the variability of the retrieved cardiac phase and explore the capability of several quality measures for quantifying such variability. An ideal detector, suitable for its application in clinical practice, should produce stable phases. That is, it should always sample the same cardiac cycle fraction. In this context, one should measure the variability (variance) of a candidate sampling with respect a ground truth (reference) sampling, since the variance would indicate how spread we are aiming a target. In order to quantify the deviation between the sampling and the ground truth, we have considered two quality scores reported in the literature: signed distance to the closest reference sample and distance to the right of each reference sample. We have also considered the residuals of the regression line of reference against candidate sampling. The performance of the measures has been explored on a set of synthetic samplings covering different cardiac cycle fractions and variabilities. From our simulations, we conclude that the metrics related to distances are sensitive to the shift considered while the residuals are robust against fraction and variabilities as far as one can establish a pair-wise correspondence between candidate and reference. We will further investigate the impact of false positive and negative detections in experimental data.
	Address
	Corporate Author				Thesis
	Publisher	IEEE	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0276-6547	ISBN	978-1-4244-7318-2	Medium
	Area		Expedition		Conference	CINC
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ HSM2010			Serial	1551
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	Author	Patricia Marquez
	Title	Conditions Ensuring Accuracy of Local Optical Flow Schemes			Type	Report
	Year	2010	Publication	CVC Tehcnical Report	Abbreviated Journal
	Volume	157	Issue		Pages
	Keywords
	Abstract	Accurate computation of optical flow is a key-point in many image processing fields. Detection of anomalous and unpredicted agents (such as pedestrians, bikers or cars) in urban scenes or pathology discrimination in medical imaging sequences, to mention just a two. The above kinds sequences present two main difficulties for standard optical flow techniques. On one hand, variability in acquisition conditions (illuminance, medical imaging modality, ...) force an alterantive representation for images fulfilling the britghtness constancy constrain. On the hand, current variational schemes produce oversmoothed fields unable to properly model discontinuous behaviours such as collisions or functionless pathological areas. This master project explores the abilities and limitations of local and global optical flow approaches. The master student will put especial emphasis in the theoretical grounds behind in order to design a variational framework combining the theoretical advantages of the considered techniques. In particular an optical flow based on Gabor phase tracking (developed in the group for medical imaging) will be generalized to urban scenes.
	Address
	Corporate Author				Thesis	Master's thesis
	Publisher		Place of Publication	Bellaterra 08193, Barcelona, Spain	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ Mar2010			Serial	1582
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	Author	Ferran Poveda; Jaume Garcia; Enric Marti; Debora Gil
	Title	Validation of the myocardial architecture in DT-MRI tractography			Type	Conference Article
	Year	2010	Publication	Medical Image Computing in Catalunya: Graduate Student Workshop	Abbreviated Journal
	Volume		Issue		Pages	29-30
	Keywords
	Abstract	Deep understanding of myocardial structure may help to link form and funcion of the heart unraveling crucial knowledge for medical and surgical clinical procedures and studies. In this work we introduce two visualization techniques based on DT-MRI streamlining able to decipher interesting properties of the architectural organization of the heart.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication	Girona (Spain)	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MICCAT
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ PGM2010			Serial	1626
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	Author	Sergio Vera
	Title	Finger joint modelling from hand X-ray images for assessing rheumatoid arthritis			Type	Report
	Year	2010	Publication	CVC Technical Report	Abbreviated Journal
	Volume	164	Issue		Pages
	Keywords	Rheumatoid arthritis; joint detection; X-ray; Van der Heijde score
	Abstract	Rheumatoid arthritis is an autoimmune, systemic, inflammatory disorder that mainly af- fects bone joints. While there is no cure for this disease, continuous advances on palliative treatments require frequent verification of patient’s illness evolution. Such evolution is mea- sured through several available semi-quantitative methods that require evaluation of hand and foot X-ray images. Accurate assessment is a time consuming task that requires highly trained personnel. This hinders a generalized use in clinical practice for early diagnose and disease follow-up. In the context of the automatization of such evaluation methods we present a method for detection and characterization of finger joints in hand radiography images. Several measures for assessing the reduction of joint space width are proposed. We compare for the first time such measures to the Van der Heijde score, the gold standard method for rheumatoid arthritis assessment. The proposed method outperforms existing strategies with a detection rate above 95%. Our comparison to Van der Heijde index shows a promising correlation that encourages further research.
	Address
	Corporate Author				Thesis	Master's thesis
	Publisher		Place of Publication	Bellaterra 01893, Barcelona, Spain	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM			Approved	no
	Call Number	IAM @ iam @ Ver2010			Serial	1661
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	Author	Fernando Vilariño; Panagiota Spyridonos; Petia Radeva; Jordi Vitria; Fernando Azpiroz; Juan Malagelada
	Title	Method for automatic classification of in vivo images			Type	Patent
	Year	2010	Publication	US 2010/0046816	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	A method for automatically detecting a post-duodenal boundary in an image stream of the gastrointestinal (GI) tract. The image stream is sampled to obtain a reduced set of images for processing. The reduced set of images is filtered to remove non-valid frames or non-valid portions of frames, thereby generating a filtered set of valid images. A polar representation of the valid images is generated. Textural features of the polar representation are processed to detect the post-duodenal boundary of the GI tract.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area	800	Expedition		Conference
	Notes	MV;OR;MILAB;SIAI			Approved	no
	Call Number	IAM @ iam @ VSR2010			Serial	1702
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	Author	Miguel Angel Bautista; Sergio Escalera; Xavier Baro; Oriol Pujol; Jordi Vitria; Petia Radeva
	Title	Compact Evolutive Design of Error-Correcting Output Codes. Supervised and Unsupervised Ensemble Methods and Applications			Type	Conference Article
	Year	2010	Publication	European Conference on Machine Learning	Abbreviated Journal
	Volume	I	Issue		Pages	119-128
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ECML
	Notes	MILAB; OR;HUPBA;MV			Approved	no
	Call Number	Admin @ si @ BEB2010			Serial	1775
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	Author	Carolina Malagelada; F.De Lorio; Fernando Azpiroz; Santiago Segui; Petia Radeva; Anna Accarino; J.Santos; Juan R. Malagelada
	Title	Intestinal Dysmotility in Patients with Functional Intestinal Disorders Demonstrated by Computer Vision Analysis of Capsule Endoscopy Images			Type	Conference Article
	Year	2010	Publication	18th United European Gastroenterology Week	Abbreviated Journal
	Volume	56	Issue	3	Pages	A19-20
	Keywords
	Abstract
	Address	Barcelona
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	UEGW
	Notes	MILAB			Approved	no
	Call Number	Admin @ si @ MLA2010			Serial	1779
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	Author	Oriol Ramos Terrades; Alejandro Hector Toselli; Nicolas Serrano; Veronica Romero; Enrique Vidal; Alfons Juan
	Title	Interactive layout analysis and transcription systems for historic handwritten documents			Type	Conference Article
	Year	2010	Publication	10th ACM Symposium on Document Engineering	Abbreviated Journal
	Volume		Issue		Pages	219–222
	Keywords	Handwriting recognition; Interactive predictive processing; Partial supervision; Interactive layout analysis
	Abstract	The amount of digitized legacy documents has been rising dramatically over the last years due mainly to the increasing number of on-line digital libraries publishing this kind of documents, waiting to be classified and finally transcribed into a textual electronic format (such as ASCII or PDF). Nevertheless, most of the available fully-automatic applications addressing this task are far from being perfect and heavy and inefficient human intervention is often required to check and correct the results of such systems. In contrast, multimodal interactive-predictive approaches may allow the users to participate in the process helping the system to improve the overall performance. With this in mind, two sets of recent advances are introduced in this work: a novel interactive method for text block detection and two multimodal interactive handwritten text transcription systems which use active learning and interactive-predictive technologies in the recognition process.
	Address	Manchester, United Kingdom
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ACM
	Notes	DAG			Approved	no
	Call Number	Admin @ si @RTS2010			Serial	1857
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	Author	N. Serrano; L. Tarazon; D. Perez; Oriol Ramos Terrades; S. Juan
	Title	The GIDOC Prototype			Type	Conference Article
	Year	2010	Publication	10th International Workshop on Pattern Recognition in Information Systems	Abbreviated Journal
	Volume		Issue		Pages	82-89
	Keywords
	Abstract	Transcription of handwritten text in (old) documents is an important, time-consuming task for digital libraries. It might be carried out by first processing all document images off-line, and then manually supervising system transcriptions to edit incorrect parts. However, current techniques for automatic page layout analysis, text line detection and handwriting recognition are still far from perfect, and thus post-editing system output is not clearly better than simply ignoring it. A more effective approach to transcribe old text documents is to follow an interactive- predictive paradigm in which both, the system is guided by the user, and the user is assisted by the system to complete the transcription task as efficiently as possible. Following this approach, a system prototype called GIDOC (Gimp-based Interactive transcription of old text DOCuments) has been developed to provide user-friendly, integrated support for interactive-predictive layout analysis, line detection and handwriting transcription. GIDOC is designed to work with (large) collections of homogeneous documents, that is, of similar structure and writing styles. They are annotated sequentially, by (par- tially) supervising hypotheses drawn from statistical models that are constantly updated with an increasing number of available annotated documents. And this is done at different annotation levels. For instance, at the level of page layout analysis, GIDOC uses a novel text block detection method in which conventional, memoryless techniques are improved with a “history” model of text block positions. Similarly, at the level of text line image transcription, GIDOC includes a handwriting recognizer which is steadily improved with a growing number of (partially) supervised transcriptions.
	Address	Funchal, Portugal
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-989-8425-14-0	Medium
	Area		Expedition		Conference	PRIS
	Notes	DAG			Approved	no
	Call Number	Admin @ si @ STP2010			Serial	1868
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