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Jorge Bernal, F. Javier Sanchez, & Fernando Vilariño. (2012). Towards Automatic Polyp Detection with a Polyp Appearance Model. PR - Pattern Recognition, 45(9), 3166–3182.
Abstract: This work aims at the automatic polyp detection by using a model of polyp appearance in the context of the analysis of colonoscopy videos. Our method consists of three stages: region segmentation, region description and region classification. The performance of our region segmentation method guarantees that if a polyp is present in the image, it will be exclusively and totally contained in a single region. The output of the algorithm also defines which regions can be considered as non-informative. We define as our region descriptor the novel Sector Accumulation-Depth of Valleys Accumulation (SA-DOVA), which provides a necessary but not sufficient condition for the polyp presence. Finally, we classify our segmented regions according to the maximal values of the SA-DOVA descriptor. Our preliminary classification results are promising, especially when classifying those parts of the image that do not contain a polyp inside.
Keywords: Colonoscopy,PolypDetection,RegionSegmentation,SA-DOVA descriptot
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M. Bressan, & Jordi Vitria. (2003). Nonparametric Discriminant Analysis and Nearest Neighbor Classification. PRL - Pattern Recognition Letters, 24(15), 2743–2749.
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David Guillamet, Jordi Vitria, & B. Shiele. (2003). Introducing a weighted non-negative matrix factorization for image classification. PRL - Pattern Recognition Letters, 24(14), 2447–2454.
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Bogdan Raducanu, & Fadi Dornaika. (2012). A Supervised Non-linear Dimensionality Reduction Approach for Manifold Learning. PR - Pattern Recognition, 45(6), 2432–2444.
Abstract: IF= 2.61
IF=2.61 (2010)
In this paper we introduce a novel supervised manifold learning technique called Supervised Laplacian Eigenmaps (S-LE), which makes use of class label information to guide the procedure of non-linear dimensionality reduction by adopting the large margin concept. The graph Laplacian is split into two components: within-class graph and between-class graph to better characterize the discriminant property of the data. Our approach has two important characteristics: (i) it adaptively estimates the local neighborhood surrounding each sample based on data density and similarity and (ii) the objective function simultaneously maximizes the local margin between heterogeneous samples and pushes the homogeneous samples closer to each other.
Our approach has been tested on several challenging face databases and it has been conveniently compared with other linear and non-linear techniques, demonstrating its superiority. Although we have concentrated in this paper on the face recognition problem, the proposed approach could also be applied to other category of objects characterized by large variations in their appearance (such as hand or body pose, for instance.
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David Vazquez, Jorge Bernal, F. Javier Sanchez, Gloria Fernandez Esparrach, Antonio Lopez, Adriana Romero, et al. (2017). A Benchmark for Endoluminal Scene Segmentation of Colonoscopy Images. JHCE - Journal of Healthcare Engineering, , 2040–2295.
Abstract: Colorectal cancer (CRC) is the third cause of cancer death world-wide. Currently, the standard approach to reduce CRC-related mortality is to perform regular screening in search for polyps and colonoscopy is the screening tool of choice. The main limitations of this screening procedure are polyp miss- rate and inability to perform visual assessment of polyp malignancy. These drawbacks can be reduced by designing Decision Support Systems (DSS) aim- ing to help clinicians in the different stages of the procedure by providing endoluminal scene segmentation. Thus, in this paper, we introduce an extended benchmark of colonoscopy image segmentation, with the hope of establishing a new strong benchmark for colonoscopy image analysis research. The proposed dataset consists of 4 relevant classes to inspect the endolumninal scene, tar- geting different clinical needs. Together with the dataset and taking advantage of advances in semantic segmentation literature, we provide new baselines by training standard fully convolutional networks (FCN). We perform a compar- ative study to show that FCN significantly outperform, without any further post-processing, prior results in endoluminal scene segmentation, especially with respect to polyp segmentation and localization.
Keywords: Colonoscopy images; Deep Learning; Semantic Segmentation
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