| |
Records |
Links |
|
Author  |
Marina Alberti; Simone Balocco; Xavier Carrillo; Josefina Mauri; Petia Radeva |
|
| |
Title |
Automatic non-rigid temporal alignment of IVUS sequences: method and quantitative validation |
Type |
Journal Article |
| |
Year |
2013 |
Publication |
Ultrasound in Medicine and Biology |
Abbreviated Journal |
UMB |
|
| |
Volume |
39 |
Issue |
9 |
Pages |
1698-712 |
|
| |
Keywords |
Intravascular ultrasound; Dynamic time warping; Non-rigid alignment; Sequence matching; Partial overlapping strategy |
|
| |
Abstract |
Clinical studies on atherosclerosis regression/progression performed by intravascular ultrasound analysis would benefit from accurate alignment of sequences of the same patient before and after clinical interventions and at follow-up. In this article, a methodology for automatic alignment of intravascular ultrasound sequences based on the dynamic time warping technique is proposed. The non-rigid alignment is adapted to the specific task by applying it to multidimensional signals describing the morphologic content of the vessel. Moreover, dynamic time warping is embedded into a framework comprising a strategy to address partial overlapping between acquisitions and a term that regularizes non-physiologic temporal compression/expansion of the sequences. Extensive validation is performed on both synthetic and in vivo data. The proposed method reaches alignment errors of approximately 0.43 mm for pairs of sequences acquired during the same intervention phase and 0.77 mm for pairs of sequences acquired at successive intervention stages. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
MILAB |
Approved |
no |
|
| |
Call Number |
Admin @ si @ ABC2013 |
Serial |
2313 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Md Mostafa Kamal Sarker; Hatem A. Rashwan; Farhan Akram; Vivek Kumar Singh; Syeda Furruka Banu; Forhad U H Chowdhury; Kabir Ahmed Choudhury; Sylvie Chambon; Petia Radeva; Domenec Puig; Mohamed Abdel-Nasser |
|
| |
Title |
SLSNet: Skin lesion segmentation using a lightweight generative adversarial network |
Type |
Journal Article |
| |
Year |
2021 |
Publication |
Expert Systems With Applications |
Abbreviated Journal |
ESWA |
|
| |
Volume |
183 |
Issue |
|
Pages |
115433 |
|
| |
Keywords |
|
|
| |
Abstract |
The determination of precise skin lesion boundaries in dermoscopic images using automated methods faces many challenges, most importantly, the presence of hair, inconspicuous lesion edges and low contrast in dermoscopic images, and variability in the color, texture and shapes of skin lesions. Existing deep learning-based skin lesion segmentation algorithms are expensive in terms of computational time and memory. Consequently, running such segmentation algorithms requires a powerful GPU and high bandwidth memory, which are not available in dermoscopy devices. Thus, this article aims to achieve precise skin lesion segmentation with minimum resources: a lightweight, efficient generative adversarial network (GAN) model called SLSNet, which combines 1-D kernel factorized networks, position and channel attention, and multiscale aggregation mechanisms with a GAN model. The 1-D kernel factorized network reduces the computational cost of 2D filtering. The position and channel attention modules enhance the discriminative ability between the lesion and non-lesion feature representations in spatial and channel dimensions, respectively. A multiscale block is also used to aggregate the coarse-to-fine features of input skin images and reduce the effect of the artifacts. SLSNet is evaluated on two publicly available datasets: ISBI 2017 and the ISIC 2018. Although SLSNet has only 2.35 million parameters, the experimental results demonstrate that it achieves segmentation results on a par with the state-of-the-art skin lesion segmentation methods with an accuracy of 97.61%, and Dice and Jaccard similarity coefficients of 90.63% and 81.98%, respectively. SLSNet can run at more than 110 frames per second (FPS) in a single GTX1080Ti GPU, which is faster than well-known deep learning-based image segmentation models, such as FCN. Therefore, SLSNet can be used for practical dermoscopic applications. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
MILAB; no proj |
Approved |
no |
|
| |
Call Number |
Admin @ si @ SRA2021 |
Serial |
3633 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Md.Mostafa Kamal Sarker; Hatem A. Rashwan; Farhan Akram; Estefania Talavera; Syeda Furruka Banu; Petia Radeva; Domenec Puig |
|
| |
Title |
Recognizing Food Places in Egocentric Photo-Streams Using Multi-Scale Atrous Convolutional Networks and Self-Attention Mechanism |
Type |
Journal Article |
| |
Year |
2019 |
Publication |
IEEE Access |
Abbreviated Journal |
ACCESS |
|
| |
Volume |
7 |
Issue |
|
Pages |
39069-39082 |
|
| |
Keywords |
|
|
| |
Abstract |
Wearable sensors (e.g., lifelogging cameras) represent very useful tools to monitor people's daily habits and lifestyle. Wearable cameras are able to continuously capture different moments of the day of their wearers, their environment, and interactions with objects, people, and places reflecting their personal lifestyle. The food places where people eat, drink, and buy food, such as restaurants, bars, and supermarkets, can directly affect their daily dietary intake and behavior. Consequently, developing an automated monitoring system based on analyzing a person's food habits from daily recorded egocentric photo-streams of the food places can provide valuable means for people to improve their eating habits. This can be done by generating a detailed report of the time spent in specific food places by classifying the captured food place images to different groups. In this paper, we propose a self-attention mechanism with multi-scale atrous convolutional networks to generate discriminative features from image streams to recognize a predetermined set of food place categories. We apply our model on an egocentric food place dataset called “EgoFoodPlaces” that comprises of 43 392 images captured by 16 individuals using a lifelogging camera. The proposed model achieved an overall classification accuracy of 80% on the “EgoFoodPlaces” dataset, respectively, outperforming the baseline methods, such as VGG16, ResNet50, and InceptionV3. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
MILAB; no menciona |
Approved |
no |
|
| |
Call Number |
Admin @ si @ SRA2019 |
Serial |
3296 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Meysam Madadi; Sergio Escalera; Jordi Gonzalez; Xavier Roca; Felipe Lumbreras |
|
| |
Title |
Multi-part body segmentation based on depth maps for soft biometry analysis |
Type |
Journal Article |
| |
Year |
2015 |
Publication |
Pattern Recognition Letters |
Abbreviated Journal |
PRL |
|
| |
Volume |
56 |
Issue |
|
Pages |
14-21 |
|
| |
Keywords |
3D shape context; 3D point cloud alignment; Depth maps; Human body segmentation; Soft biometry analysis |
|
| |
Abstract |
This paper presents a novel method extracting biometric measures using depth sensors. Given a multi-part labeled training data, a new subject is aligned to the best model of the dataset, and soft biometrics such as lengths or circumference sizes of limbs and body are computed. The process is performed by training relevant pose clusters, defining a representative model, and fitting a 3D shape context descriptor within an iterative matching procedure. We show robust measures by applying orthogonal plates to body hull. We test our approach in a novel full-body RGB-Depth data set, showing accurate estimation of soft biometrics and better segmentation accuracy in comparison with random forest approach without requiring large training data. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
HuPBA; ISE; ADAS; 600.076;600.049; 600.063; 600.054; 302.018;MILAB |
Approved |
no |
|
| |
Call Number |
Admin @ si @ MEG2015 |
Serial |
2588 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Michal Drozdzal; Santiago Segui; Carolina Malagelada; Fernando Azpiroz; Petia Radeva |
|
| |
Title |
Adaptable image cuts for motility inspection using WCE |
Type |
Journal Article |
| |
Year |
2013 |
Publication |
Computerized Medical Imaging and Graphics |
Abbreviated Journal |
CMIG |
|
| |
Volume |
37 |
Issue |
1 |
Pages |
72-80 |
|
| |
Keywords |
|
|
| |
Abstract |
The Wireless Capsule Endoscopy (WCE) technology allows the visualization of the whole small intestine tract. Since the capsule is freely moving, mainly by the means of peristalsis, the data acquired during the study gives a lot of information about the intestinal motility. However, due to: (1) huge amount of frames, (2) complex intestinal scene appearance and (3) intestinal dynamics that make difficult the visualization of the small intestine physiological phenomena, the analysis of the WCE data requires computer-aided systems to speed up the analysis. In this paper, we propose an efficient algorithm for building a novel representation of the WCE video data, optimal for motility analysis and inspection. The algorithm transforms the 3D video data into 2D longitudinal view by choosing the most informative, from the intestinal motility point of view, part of each frame. This step maximizes the lumen visibility in its longitudinal extension. The task of finding “the best longitudinal view” has been defined as a cost function optimization problem which global minimum is obtained by using Dynamic Programming. Validation on both synthetic data and WCE data shows that the adaptive longitudinal view is a good alternative to the traditional motility analysis done by video analysis. The proposed novel data representation a new, holistic insight into the small intestine motility, allowing to easily define and analyze motility events that are difficult to spot by analyzing WCE video. Moreover, the visual inspection of small intestine motility is 4 times faster then by means of video skimming of the WCE. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
MILAB; OR; 600.046; 605.203 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ DSM2012 |
Serial |
2151 |
|
| Permanent link to this record |
