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Carlos Martin Isla, Victor M Campello, Cristian Izquierdo, Kaisar Kushibar, Carla Sendra Balcells, Polyxeni Gkontra, et al. (2023). Deep Learning Segmentation of the Right Ventricle in Cardiac MRI: The M&ms Challenge. JBHI - IEEE Journal of Biomedical and Health Informatics, 27(7), 3302–3313.
Abstract: In recent years, several deep learning models have been proposed to accurately quantify and diagnose cardiac pathologies. These automated tools heavily rely on the accurate segmentation of cardiac structures in MRI images. However, segmentation of the right ventricle is challenging due to its highly complex shape and ill-defined borders. Hence, there is a need for new methods to handle such structure's geometrical and textural complexities, notably in the presence of pathologies such as Dilated Right Ventricle, Tricuspid Regurgitation, Arrhythmogenesis, Tetralogy of Fallot, and Inter-atrial Communication. The last MICCAI challenge on right ventricle segmentation was held in 2012 and included only 48 cases from a single clinical center. As part of the 12th Workshop on Statistical Atlases and Computational Models of the Heart (STACOM 2021), the M&Ms-2 challenge was organized to promote the interest of the research community around right ventricle segmentation in multi-disease, multi-view, and multi-center cardiac MRI. Three hundred sixty CMR cases, including short-axis and long-axis 4-chamber views, were collected from three Spanish hospitals using nine different scanners from three different vendors, and included a diverse set of right and left ventricle pathologies. The solutions provided by the participants show that nnU-Net achieved the best results overall. However, multi-view approaches were able to capture additional information, highlighting the need to integrate multiple cardiac diseases, views, scanners, and acquisition protocols to produce reliable automatic cardiac segmentation algorithms.
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Razieh Rastgoo, Kourosh Kiani, & Sergio Escalera. (2023). A deep co-attentive hand-based video question answering framework using multi-view skeleton. MTAP - Multimedia Tools and Applications, 82, 1401–1429.
Abstract: In this paper, we present a novel hand –based Video Question Answering framework, entitled Multi-View Video Question Answering (MV-VQA), employing the Single Shot Detector (SSD), Convolutional Neural Network (CNN), Long Short-Term Memory (LSTM), Bidirectional Encoder Representations from Transformers (BERT), and Co-Attention mechanism with RGB videos as the inputs. Our model includes three main blocks: vision, language, and attention. In the vision block, we employ a novel representation to obtain some efficient multiview features from the hand object using the combination of five 3DCNNs and one LSTM network. To obtain the question embedding, we use the BERT model in language block. Finally, we employ a co-attention mechanism on vision and language features to recognize the final answer. For the first time, we propose such a hand-based Video-QA framework including the multi-view hand skeleton features combined with the question embedding and co-attention mechanism. Our framework is capable of processing the arbitrary numbers of questions in the dataset annotations. There are different application domains for this framework. Here, as an application domain, we applied our framework to dynamic hand gesture recognition for the first time. Since the main object in dynamic hand gesture recognition is the human hand, we performed a step-by-step analysis of the hand detection and multi-view hand skeleton impact on the model performance. Evaluation results on five datasets, including two datasets in VideoQA, two datasets in dynamic hand gesture, and one dataset in hand action recognition show that MV-VQA outperforms state-of-the-art alternatives.
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Zahra Raisi-Estabragh, Carlos Martin-Isla, Louise Nissen, Liliana Szabo, Victor M. Campello, Sergio Escalera, et al. (2023). Radiomics analysis enhances the diagnostic performance of CMR stress perfusion: a proof-of-concept study using the Dan-NICAD dataset. FCM - Frontiers in Cardiovascular Medicine, .
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Adrien Pavao, Isabelle Guyon, Anne-Catherine Letournel, Dinh-Tuan Tran, Xavier Baro, Hugo Jair Escalante, et al. (2023). CodaLab Competitions: An Open Source Platform to Organize Scientific Challenges. JMLR - Journal of Machine Learning Research, .
Abstract: CodaLab Competitions is an open source web platform designed to help data scientists and research teams to crowd-source the resolution of machine learning problems through the organization of competitions, also called challenges or contests. CodaLab Competitions provides useful features such as multiple phases, results and code submissions, multi-score leaderboards, and jobs running
inside Docker containers. The platform is very flexible and can handle large scale experiments, by allowing organizers to upload large datasets and provide their own CPU or GPU compute workers.
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Anders Skaarup Johansen, Kamal Nasrollahi, Sergio Escalera, & Thomas B. Moeslund. (2023). Who Cares about the Weather? Inferring Weather Conditions for Weather-Aware Object Detection in Thermal Images. AS - Applied Sciences, 13(18).
Abstract: Deployments of real-world object detection systems often experience a degradation in performance over time due to concept drift. Systems that leverage thermal cameras are especially susceptible because the respective thermal signatures of objects and their surroundings are highly sensitive to environmental changes. In this study, two types of weather-aware latent conditioning methods are investigated. The proposed method aims to guide two object detectors, (YOLOv5 and Deformable DETR) to become weather-aware. This is achieved by leveraging an auxiliary branch that predicts weather-related information while conditioning intermediate layers of the object detector. While the conditioning methods proposed do not directly improve the accuracy of baseline detectors, it can be observed that conditioned networks manage to extract a weather-related signal from the thermal images, thus resulting in a decreased miss rate at the cost of increased false positives. The extracted signal appears noisy and is thus challenging to regress accurately. This is most likely a result of the qualitative nature of the thermal sensor; thus, further work is needed to identify an ideal method for optimizing the conditioning branch, as well as to further improve the accuracy of the system.
Keywords: thermal; object detection; concept drift; conditioning; weather recognition
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