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	Author	Francesco Brughi; Debora Gil; Llorenç Badiella; Eva Jove Casabella; Oriol Ramos Terrades
	Title	Exploring the impact of inter-query variability on the performance of retrieval systems			Type	Conference Article
	Year	2014	Publication	11th International Conference on Image Analysis and Recognition	Abbreviated Journal
	Volume	8814	Issue		Pages	413–420
	Keywords
	Abstract	This paper introduces a framework for evaluating the performance of information retrieval systems. Current evaluation metrics provide an average score that does not consider performance variability across the query set. In this manner, conclusions lack of any statistical significance, yielding poor inference to cases outside the query set and possibly unfair comparisons. We propose to apply statistical methods in order to obtain a more informative measure for problems in which different query classes can be identified. In this context, we assess the performance variability on two levels: overall variability across the whole query set and specific query class-related variability. To this end, we estimate confidence bands for precision-recall curves, and we apply ANOVA in order to assess the significance of the performance across different query classes.
	Address	Algarve; Portugal; October 2014
	Corporate Author				Thesis
	Publisher	Springer International Publishing	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN	0302-9743	ISBN	978-3-319-11757-7	Medium
	Area		Expedition		Conference	ICIAR
	Notes	IAM; DAG; 600.060; 600.061; 600.077; 600.075			Approved	no
	Call Number	Admin @ si @ BGB2014			Serial	2559
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	Author	Carles Sanchez; Jorge Bernal; Debora Gil; F. Javier Sanchez
	Title	On-line lumen centre detection in gastrointestinal and respiratory endoscopy			Type	Conference Article
	Year	2013	Publication	Second International Workshop Clinical Image-Based Procedures	Abbreviated Journal
	Volume	8361	Issue		Pages	31-38
	Keywords	Lumen centre detection; Bronchoscopy; Colonoscopy
	Abstract	We present in this paper a novel lumen centre detection for gastrointestinal and respiratory endoscopic images. The proposed method is based on the appearance and geometry of the lumen, which we defined as the darkest image region which centre is a hub of image gradients. Experimental results validated on the first public annotated gastro-respiratory database prove the reliability of the method for a wide range of images (with precision over 95 %).
	Address	Nagoya; Japan; September 2013
	Corporate Author				Thesis
	Publisher	Springer International Publishing	Place of Publication		Editor	Erdt, Marius and Linguraru, Marius George and Oyarzun Laura, Cristina and Shekhar, Raj and Wesarg, Stefan and González Ballester, Miguel Angel and Drechsler, Klaus
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-3-319-05665-4	Medium
	Area	800	Expedition		Conference	CLIP
	Notes	MV; IAM; 600.047; 600.044; 600.060			Approved	no
	Call Number	Admin @ si @ SBG2013			Serial	2302
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	Author	Debora Gil; Oriol Ramos Terrades; Raquel Perez
	Title	Topological Radiomics (TOPiomics): Early Detection of Genetic Abnormalities in Cancer Treatment Evolution			Type	Book Chapter
	Year	2021	Publication	Extended Abstracts GEOMVAP 2019, Trends in Mathematics 15	Abbreviated Journal
	Volume	15	Issue		Pages	89–93
	Keywords
	Abstract	Abnormalities in radiomic measures correlate to genomic alterations prone to alter the outcome of personalized anti-cancer treatments. TOPiomics is a new method for the early detection of variations in tumor imaging phenotype from a topological structure in multi-view radiomic spaces.
	Address
	Corporate Author				Thesis
	Publisher	Springer Nature	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; DAG; 600.120; 600.145; 600.139			Approved	no
	Call Number	Admin @ si @ GRP2021			Serial	3594
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	Author	Debora Gil; Aura Hernandez-Sabate; Antoni Carol; Oriol Rodriguez; Petia Radeva
	Title	A Deterministic-Statistic Adventitia Detection in IVUS Images			Type	Conference Article
	Year	2005	Publication	3rd International workshop on International Workshop on Functional Imaging and Modeling of the Heart	Abbreviated Journal
	Volume		Issue		Pages	65-74
	Keywords	Electron microscopy; Unbending; 2D crystal; Interpolation; Approximation
	Abstract	Plaque analysis in IVUS planes needs accurate intima and adventitia models. Large variety in adventitia descriptors difficulties its detection and motivates using a classification strategy for selecting points on the structure. Whatever the set of descriptors used, the selection stage suffers from fake responses due to noise and uncompleted true curves. In order to smooth background noise while strengthening responses, we apply a restricted anisotropic filter that homogenizes grey levels along the image significant structures. Candidate points are extracted by means of a simple semi supervised adaptive classification of the filtered image response to edge and calcium detectors. The final model is obtained by interpolating the former line segments with an anisotropic contour closing technique based on functional extension principles.
	Address	Barcelona; June 2005
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	FIMH
	Notes	IAM;MILAB			Approved	no
	Call Number	IAM @ iam @ RMF2005			Serial	1524
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	Author	Oriol Rodriguez-Leon; Josefina Mauri; Eduard Fernandez-Nofrerias; M.Gomez; Antonio Tovar; L.Cano; C.Diego; Carme Julia; Vicente del Valle; Debora Gil; Petia Radeva
	Title	Ecografia Intracoronaria: Segmentacio Automatica de area de la llum			Type	Journal
	Year	2002	Publication	Revista Societat Catalana de Cardiologia	Abbreviated Journal
	Volume	4	Issue	4	Pages	42
	Keywords
	Abstract
	Address	Barcelona
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	XIVe Congres de la Societat Catalana de Cardiologia
	Notes	MILAB;IAM			Approved	no
	Call Number	BCNPCL @ bcnpcl @ RMF2002			Serial	435
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	Author	Oriol Rodriguez-Leon; Josefina Mauri;Eduard Fernandez-Nofrerias; Antonio Tovar; Vicente del Valle; Aura Hernandez-Sabate; Debora Gil; Petia Radeva
	Title	Utilizacion de la estructura de los campos vectoriales para la deteccion de la Adventicia en imagenes de Ecografia Intracoronaria			Type	Journal
	Year	2004	Publication	Revista Española de Cardiología	Abbreviated Journal	REC
	Volume	57	Issue	2	Pages	100
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	SEC
	Notes	MILAB;IAM			Approved	no
	Call Number	BCNPCL @ bcnpcl @ RMF2004			Serial	566
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	Author	Enric Marti; Debora Gil; Carme Julia
	Title	Una experiencia de PBL en la docencia de la asignatura de Graficos por Computador en Ingenieria Informatica			Type	Miscellaneous
	Year	2006	Publication	IV Contreso Internacional de Docencia Universitaria e Innovacion	Abbreviated Journal
	Volume	1	Issue		Pages	375
	Keywords
	Abstract
	Address	Barcelona (Spain)
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;ADAS;			Approved	no
	Call Number	IAM @ iam @ MGJ2006b			Serial	931
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	Author	Debora Gil; Jaume Garcia; Mariano Vazquez; Ruth Aris; Guilleaume Houzeaux
	Title	Patient-Sensitive Anatomic and Functional 3D Model of the Left Ventricle Function			Type	Conference Article
	Year	2008	Publication	8th World Congress on Computational Mechanichs (WCCM8)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords	Left Ventricle, Electromechanical Models, Image Processing, Magnetic Resonance.
	Abstract	Early diagnosis and accurate treatment of Left Ventricle (LV) dysfunction significantly increases the patient survival. Impairment of LV contractility due to cardiovascular diseases is reflected in its motion patterns. Recent advances in medical imaging, such as Magnetic Resonance (MR), have encouraged research on 3D simulation and modelling of the LV dynamics. Most of the existing 3D models [1] consider just the gross anatomy of the LV and restore a truncated ellipse which deforms along the cardiac cycle. The contraction mechanics of any muscle strongly depends on the spatial orientation of its muscular fibers since the motion that the muscle undergoes mainly takes place along the fibers. It follows that such simplified models do not allow evaluation of the heart electro-mechanical function and coupling, which has recently risen as the key point for understanding the LV functionality [2]. In order to thoroughly understand the LV mechanics it is necessary to consider the complete anatomy of the LV given by the orientation of the myocardial fibres in 3D space as described by Torrent Guasp [3]. We propose developing a 3D patient-sensitive model of the LV integrating, for the first time, the ven- tricular band anatomy (fibers orientation), the LV gross anatomy and its functionality. Such model will represent the LV function as a natural consequence of its own ventricular band anatomy. This might be decisive in restoring a proper LV contraction in patients undergoing pace marker treatment. The LV function is defined as soon as the propagation of the contractile electromechanical pulse has been modelled. In our experiments we have used the wave equation for the propagation of the electric pulse. The electromechanical wave moves on the myocardial surface and should have a conductivity tensor oriented along the muscular fibers. Thus, whatever mathematical model for electric pulse propa- gation [4] we consider, the complete anatomy of the LV should be extracted. The LV gross anatomy is obtained by processing multi slice MR images recorded for each patient. Information about the myocardial fibers distribution can only be extracted by Diffusion Tensor Imag- ing (DTI), which can not provide in vivo information for each patient. As a first approach, we have Figure 1: Scheme for the Left Ventricle Patient-Sensitive Model. computed an average model of fibers from several DTI studies of canine hearts. This rough anatomy is the input for our electro-mechanical propagation model simulating LV dynamics. The average fiber orientation is updated until the simulated LV motion agrees with the experimental evidence provided by the LV motion observed in tagged MR (TMR) sequences. Experimental LV motion is recovered by applying image processing, differential geometry and interpolation techniques to 2D TMR slices [5]. The pipeline in figure 1 outlines the interaction between simulations and experimental data leading to our patient-tailored model.
	Address	Venice; Italy
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	9788496736559	Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ GGV2008b			Serial	993
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	Author	Jaume Garcia; Debora Gil; Sandra Pujades; Francesc Carreras
	Title	Valoracion de la Funcion del Ventriculo Izquierdo mediante Modelos Regionales Hiperparametricos			Type	Journal Article
	Year	2008	Publication	Revista Española de Cardiologia	Abbreviated Journal
	Volume	61	Issue	3	Pages	79
	Keywords
	Abstract	La mayoría de la enfermedades cardiovasculares afectan a las propiedades contráctiles de la banda ventricular helicoidal. Esto se refleja en una variación del comportamiento normal de la función ventricular. Parámetros locales tales como los strains, o la deformación experimentada por el tejido, son indicadores capaces de detectar anomalías funcionales en territorios específicos. A menudo, dichos parámetros son considerados de forma separada. En este trabajo presentamos un marco computacional (el Dominio Paramétrico Normalizado, DPN) que permite integrarlos en hiperparámetros funcionales y estudiar sus rangos de normalidad. Dichos rangos permiten valorar de forma objetiva la función regional de cualquier nuevo paciente. Para ello, consideramos secuencias de resonancia magnética etiquetada a nivel basal, medio y apical. Los hiperparámetros se obtienen a partir del movimiento intramural del VI estimado mediante el método Harmonic Phase Flow. El DPN se define a partir de en una parametrización del Ventrículo Izquierdo (VI) en sus coordenadas radiales y circunferencial basada en criterios anatómicos. El paso de los hiperparámetros al DPN hace posible la comparación entre distintos pacientes. Los rangos de normalidad se definen mediante análisis estadístico de valores de voluntarios sanos en 45 regiones del DPN a lo largo de 9 fases sistólicas. Se ha usado un conjunto de 19 (14 H; E: 30.7±7.5) voluntarios sanos para crear los patrones de normalidad y se han validado usando 2 controles sanos y 3 pacientes afectados de contractilidad global reducida. Para los controles los resultados regionales se han ajustado dentro de la normalidad, mientras que para los pacientes se han obtenido valores anormales en las zonas descritas, localizando y cuantificando así el diagnóstico empírico.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ GRP2008			Serial	1032
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	Author	C. Santa-Marta; Jaume Garcia; A. Bajo; J.J. Vaquero; M. Ledesma-Carbayo; Debora Gil
	Title	Influence of the Temporal Resolution on the Quantification of Displacement Fields in Cardiac Magnetic Resonance Tagged Images			Type	Conference Article
	Year	2008	Publication	XXVI Congreso Anual de la Sociedad Española de Ingenieria Biomedica	Abbreviated Journal
	Volume		Issue		Pages	352–353
	Keywords
	Abstract	It is difficult to acquire tagged cardiac MR images with a high temporal and spatial resolution using clinical MR scanners. However, if such images are used for quantifying scores based on motion, it is essential a resolution as high as possibl e. This paper explores the influence of the temporal resolution of a tagged series on the quantification of myocardial dynamic parameters. To such purpose we have designed a SPAMM (Spatial Modulation of Magnetization) sequence allowing acquisition of sequences at simple and double temporal resolution. Sequences are processed to compute myocardial motion by an automatic technique based on the tracking of the harmonic phase of tagged images (the Harmonic Phase Flow, HPF). The results have been compared to manual tracking of myocardial tags. The error in displacement fields for double resolution sequences reduces 17%.
	Address	Valladolid
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor	Roberto hornero, Saniel Abasolo
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CASEIB
	Notes	IAM;			Approved	no
	Call Number	IAM @ iam @ SGB2008			Serial	1033
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	Author	Enric Marti; Ferran Poveda; Antoni Gurgui; Jaume Rocarias; Debora Gil; Aura Hernandez-Sabate
	Title	Una experiencia de estructura, funcionamiento y evaluación de la asignatura de graficos por computador con metodologia de aprendizaje basado en proyectos			Type	Miscellaneous
	Year	2013	Publication	IV Congreso Internacional UNIVEST	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	IV Congreso Internacional UNIVEST
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	UNIVEST
	Notes	IAM; ADAS			Approved	no
	Call Number	Admin @ si @ MPG2013b			Serial	2384
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	Author	Enric Marti; Jaume Rocarias; Debora Gil; Marc Vivet; Carme Julia
	Title	Uso de recursos virtuales en Aprendizaje Basado en Proyectos. Una experiencia en la asignatura de Graficos por Computador			Type	Miscellaneous
	Year	2008	Publication	Octava Jornada sobre Aprendizaje Cooperativo	Abbreviated Journal
	Volume		Issue		Pages	79–88
	Keywords
	Abstract	En esta comunicación presentamos una experiencia en Aprendizaje Basado en Proyectos (Project Based Learning – PBL) realizada los últimos cuatro años (cursos del 2004-05 al 2007-08) en Gráficos por Computador 2, asignatura optativa de tercer curso de Ingeniería Informática, titulación impartida en la Escuela Técnica Superior de Ingeniería (ETSE) de la Universidad Autónoma de Barcelona (UAB). Fruto de la constante voluntad de mejora de la organización ABP de nuestra asignatura nos decidimos a utilizar una herramienta LMS (Learning Management System) basada en Moodle y adaptada por nosotros llamada Caronte para poder gestionar la documentación generada en ABP, y añadir una componente semipresencial a la asignatura. En primer lugar se presenta la organización de nuestra asignatura, basada proponer al alumno dos itinerarios para cursarla: el itinerario ABP y el itinerario basado en clases magistrales i examen que llamaremos TPPE (Teoría, Problemas, Prácticas, Examen). La dinámica ABP nos genera una cantidad importante de documentación entre los grupos y el profesor, aparte de el feedback que el profesor genera a los alumnos. En la segunda parte del artículo presentamos los espacios docentes electrónicos de ambos itinerarios, con los que trabajan los alumnos. Finalmente, mostramos los resultados obtenidos de alumnos matriculados y de encuestas de valoración realizados por los alumnos para finalmente exponer las conclusiones de estos cuatro años de experiencia en ABP y en el uso de recursos virtuales en ABP, así como plantear mejoras y temas de discusión sobre ABP.
	Address	Lleida
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN	978-84-691-4605-7	Medium
	Area		Expedition		Conference
	Notes	IAM;ADAS;			Approved	no
	Call Number	IAM @ iam @ MRG2008a			Serial	1101
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	Author	Enric Marti; Carme Julia; Debora Gil
	Title	Una experiencia de PBL en la docencia de la asignatura de Graficos por Computador en Ingenieria Informatica			Type	Miscellaneous
	Year	2006	Publication	IV Congreso Internacional Docencia Universitaria e Innovacion (CIDUI´06)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address	Barcelona
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM;ADAS;			Approved	no
	Call Number	IAM @ iam @ MJG2006b			Serial	1123
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	Author	Cristina Cañero; Petia Radeva; Oriol Pujol; Ricardo Toledo; Debora Gil; J. Saludes; Juan J. Villanueva; B. Garcia del Blanco; J. Mauri; E. Fernandez-Nofrerias; J.A. Gomez-Hospital; E. Iraculis; J. Comin; C. Quiles; F. Jara; A. Cequier; E. Esplugas
	Title	Optimal Stent Implantation: Three-dimensional Evaluation of the Mutual Position of Stent and Vessel via Intracoronary Ecography			Type	Conference Article
	Year	1999	Publication	Proceedings of International Conference on Computer in Cardiology (CIC´99)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	We present a new automatic technique to visualize and quantify the mutual position between the stent and the vessel wall by considering their three-dimensional reconstruction. Two deformable generalized cylinders adapt to the image features in all IVUS planes corresponding to the vessel wall and the stent in order to reconstruct the boundaries of the stent and the vessel in space. The image features that characterize the stent and the vessel wall are determined in terms of edge and ridge image detectors taking into account the gray level of the image pixels. We show that the 30 reconstruction by deformable cylinders is accurate and robust due to the spatial data coherence in the considered volumetric IVUS image. The main clinic utility of the stent and vessel reconstruction by deformable’ cylinders consists of its possibility to visualize and to assess the optimal stent introduction.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MILAB; RV; IAM; ADAS; HuPBA			Approved	no
	Call Number	IAM @ iam @ CRP1999a			Serial	1491
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	Author	Cristina Cañero; Petia Radeva; Oriol Pujol; Ricardo Toledo; Debora Gil; J. Saludes; Juan J. Villanueva; B. Garcia del Blanco; Josefina Mauri; Eduard Fernandez-Nofrerias; J.A. Gomez-Hospital; E. Iraculis; J. Comin; C. Quiles; F. Jara; A. Cequier; E.Esplugas
	Title	Three-dimensional reconstruction and quantification of the coronary tree using intravascular ultrasound images			Type	Conference Article
	Year	1999	Publication	Proceedings of International Conference on Computer in Cardiology (CIC´99)	Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract	In this paper we propose a new Computer Vision technique to reconstruct the vascular wall in space using a deformable model-based technique and compounding methods, based in biplane angiography and intravascular ultrasound data jicsion. It is also proposed a generalpurpose three-dimensional guided interpolation method. The three dimensional centerline of the vessel is reconstructed from geometrically corrected biplane angiographies using automatic segmentation methods and snakes. The IVUS image planes are located in the threedimensional space and correctly oriented. A led interpolation method based in B-SurJaces and snakes isused to fill the gaps among image planes
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CINC99
	Notes	MILAB;RV;IAM;ADAS;HuPBA			Approved	no
	Call Number	IAM @ iam @ CRP1999b			Serial	1492
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