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Gabriela Ramirez; Esau Villatoro; Bogdan Ionescu; Hugo Jair Escalante; Sergio Escalera; Martha Larson; Henning Muller; Isabelle Guyon |
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Overview of the Multimedia Information Processing for Personality & Social Networks Analysis Contes |
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2018 |
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Multimedia Information Processing for Personality and Social Networks Analysis (MIPPSNA 2018) |
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Beijing; China; August 2018 |
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ICPRW |
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HUPBA |
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Admin @ si @ RVI2018 |
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3211 |
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Raul Gomez; Lluis Gomez; Jaume Gibert; Dimosthenis Karatzas |
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Title |
Self-Supervised Learning from Web Data for Multimodal Retrieval |
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2019 |
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Multi-Modal Scene Understanding Book |
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279-306 |
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self-supervised learning; webly supervised learning; text embeddings; multimodal retrieval; multimodal embedding |
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Self-Supervised learning from multimodal image and text data allows deep neural networks to learn powerful features with no need of human annotated data. Web and Social Media platforms provide a virtually unlimited amount of this multimodal data. In this work we propose to exploit this free available data to learn a multimodal image and text embedding, aiming to leverage the semantic knowledge learnt in the text domain and transfer it to a visual model for semantic image retrieval. We demonstrate that the proposed pipeline can learn from images with associated text without supervision and analyze the semantic structure of the learnt joint image and text embeddingspace. Weperformathoroughanalysisandperformancecomparisonoffivedifferentstateof the art text embeddings in three different benchmarks. We show that the embeddings learnt with Web and Social Media data have competitive performances over supervised methods in the text basedimageretrievaltask,andweclearlyoutperformstateoftheartintheMIRFlickrdatasetwhen training in the target data. Further, we demonstrate how semantic multimodal image retrieval can be performed using the learnt embeddings, going beyond classical instance-level retrieval problems. Finally, we present a new dataset, InstaCities1M, composed by Instagram images and their associated texts that can be used for fair comparison of image-text embeddings. |
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DAG; 600.129; 601.338; 601.310 |
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Admin @ si @ GGG2019 |
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3266 |
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Xavier Otazu; M. Ribo; J.M. Paredes; M. Peracaula; J. Nuñez |
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Multiresolution approach for period determination on unevenly sampled data |
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2004 |
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Monthly Notices of the Royal Astronomical Society, 351:251–219 (IF: 5.238) |
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CAT @ cat @ ORP2004 |
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451 |
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Xavier Otazu; M. Ribo; M. Peracaula; J.M. Paredes; J. Nuñez |
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Detection of superimposed periodic signals using wavelets |
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2002 |
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Monthly Notices of the Royal Astronomical Society, 333, 2: 365–372 (IF: 4.671) |
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CAT @ cat @ ORP2002 |
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272 |
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B. Moghaddam; David Guillamet; Jordi Vitria |
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Local Appearance-Based Models using High-Order Statistics of Image Features |
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2003 |
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Mitsubishi Electrical Reasearch Lab Technical Report |
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OR;MV |
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BCNPCL @ bcnpcl @ TR2003-85 |
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396 |
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Misael Rosales; Petia Radeva; J. Mauri; Oriol Pujol |
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Simulation Model of Intravascular Ultrasound Images |
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2004 |
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MICCAI, 2004, Saint Melo, France |
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Springer Verlag |
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MILAB;HuPBA |
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BCNPCL @ bcnpcl @ RRM2004b |
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464 |
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Simone Balocco; O. Camara; E. Vivas; T. Sola; L. Guimaraens; H. A. van Andel; C. B. Majoie; J. M. Pozo; B. H. Bijnens; Alejandro F. Frangi |
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Feasibility of Estimating Regional Mechanical Properties of Cerebral Aneurysms In Vivo |
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2010 |
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Medical Physics |
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MEDPHYS |
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37 |
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4 |
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1689–1706 |
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PURPOSE:
In this article, the authors studied the feasibility of estimating regional mechanical properties in cerebral aneurysms, integrating information extracted from imaging and physiological data with generic computational models of the arterial wall behavior.
METHODS:
A data assimilation framework was developed to incorporate patient-specific geometries into a given biomechanical model, whereas wall motion estimates were obtained from applying registration techniques to a pair of simulated MR images and guided the mechanical parameter estimation. A simple incompressible linear and isotropic Hookean model coupled with computational fluid-dynamics was employed as a first approximation for computational purposes. Additionally, an automatic clustering technique was developed to reduce the number of parameters to assimilate at the optimization stage and it considerably accelerated the convergence of the simulations. Several in silico experiments were designed to assess the influence of aneurysm geometrical characteristics and the accuracy of wall motion estimates on the mechanical property estimates. Hence, the proposed methodology was applied to six real cerebral aneurysms and tested against a varying number of regions with different elasticity, different mesh discretization, imaging resolution, and registration configurations.
RESULTS:
Several in silico experiments were conducted to investigate the feasibility of the proposed workflow, results found suggesting that the estimation of the mechanical properties was mainly influenced by the image spatial resolution and the chosen registration configuration. According to the in silico experiments, the minimal spatial resolution needed to extract wall pulsation measurements with enough accuracy to guide the proposed data assimilation framework was of 0.1 mm.
CONCLUSIONS:
Current routine imaging modalities do not have such a high spatial resolution and therefore the proposed data assimilation framework cannot currently be used on in vivo data to reliably estimate regional properties in cerebral aneurysms. Besides, it was observed that the incorporation of fluid-structure interaction in a biomechanical model with linear and isotropic material properties did not have a substantial influence in the final results. |
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MILAB |
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BCNPCL @ bcnpcl @ BCV2010 |
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1313 |
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Simone Balocco; Carlo Gatta; Marina Alberti; Xavier Carrillo; Juan Rigla; Petia Radeva |
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Title |
Relation between plaque type, plaque thickness, blood shear stress and plaque stress in coronary arteries assessed by X-ray Angiography and Intravascular Ultrasound |
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2012 |
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Medical Physics |
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MEDPHYS |
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39 |
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12 |
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7430-7445 |
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PMID 23231293
PURPOSE:
Atheromatic plaque progression is affected, among others phenomena, by biomechanical, biochemical, and physiological factors. In this paper, the authors introduce a novel framework able to provide both morphological (vessel radius, plaque thickness, and type) and biomechanical (wall shear stress and Von Mises stress) indices of coronary arteries.
METHODS:
First, the approach reconstructs the three-dimensional morphology of the vessel from intravascular ultrasound (IVUS) and Angiographic sequences, requiring minimal user interaction. Then, a computational pipeline allows to automatically assess fluid-dynamic and mechanical indices. Ten coronary arteries are analyzed illustrating the capabilities of the tool and confirming previous technical and clinical observations.
RESULTS:
The relations between the arterial indices obtained by IVUS measurement and simulations have been quantitatively analyzed along the whole surface of the artery, extending the analysis of the coronary arteries shown in previous state of the art studies. Additionally, for the first time in the literature, the framework allows the computation of the membrane stresses using a simplified mechanical model of the arterial wall.
CONCLUSIONS:
Circumferentially (within a given frame), statistical analysis shows an inverse relation between the wall shear stress and the plaque thickness. At the global level (comparing a frame within the entire vessel), it is observed that heavy plaque accumulations are in general calcified and are located in the areas of the vessel having high wall shear stress. Finally, in their experiments the inverse proportionality between fluid and structural stresses is observed. |
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MILAB |
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Admin @ si @BGA2012 |
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2170 |
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Francesco Ciompi; Simone Balocco; Juan Rigla; Xavier Carrillo; Josefina Mauri; Petia Radeva |
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Computer-Aided Detection of Intra-Coronary Stent in Intravascular Ultrasound Sequences |
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2016 |
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Medical Physics |
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MP |
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43 |
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10 |
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Purpose: An intraluminal coronary stent is a metal mesh tube deployed in a stenotic artery during Percutaneous Coronary Intervention (PCI), in order to prevent acute vessel occlusion. The identi cation of struts location and the de nition of the stent shape are relevant for PCI planning 15 and for patient follow-up. We present a fully-automatic framework for Computer-Aided Detection
(CAD) of intra-coronary stents in Intravascular Ultrasound (IVUS) image sequences. The CAD system is able to detect stent struts and estimate the stent shape.
Methods: The proposed CAD uses machine learning to provide a comprehensive interpretation of the local structure of the vessel by means of semantic classi cation. The output of the classi cation 20 stage is then used to detect struts and to estimate the stent shape. The proposed approach is validated using a multi-centric data-set of 1,015 images from 107 IVUS sequences containing both metallic and bio-absorbable stents.
Results: The method was able to detect structs in both metallic stents with an overall F-measure of 77.7% and a mean distance of 0.15 mm from manually annotated struts, and in bio-absorbable 25 stents with an overall F-measure of 77.4% and a mean distance of 0.09 mm from manually annotated struts.
Conclusions: The results are close to the inter-observer variability and suggest that the system has the potential of being used as method for aiding percutaneous interventions. |
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MILAB |
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Admin @ si @ CBR2016 |
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2819 |
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Simone Balocco; Francesco Ciompi; Juan Rigla; Xavier Carrillo; Josefina Mauri; Petia Radeva |
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Assessment of intracoronary stent location and extension in intravascular ultrasound sequences |
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2019 |
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Medical Physics |
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MEDPHYS |
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46 |
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2 |
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484-493 |
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Keywords |
IVUS; malapposition; stent; ultrasound |
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Abstract |
PURPOSE:
An intraluminal coronary stent is a metal scaffold deployed in a stenotic artery during percutaneous coronary intervention (PCI). In order to have an effective deployment, a stent should be optimally placed with regard to anatomical structures such as bifurcations and stenoses. Intravascular ultrasound (IVUS) is a catheter-based imaging technique generally used for PCI guiding and assessing the correct placement of the stent. A novel approach that automatically detects the boundaries and the position of the stent along the IVUS pullback is presented. Such a technique aims at optimizing the stent deployment.
METHODS:
The method requires the identification of the stable frames of the sequence and the reliable detection of stent struts. Using these data, a measure of likelihood for a frame to contain a stent is computed. Then, a robust binary representation of the presence of the stent in the pullback is obtained applying an iterative and multiscale quantization of the signal to symbols using the Symbolic Aggregate approXimation algorithm.
RESULTS:
The technique was extensively validated on a set of 103 IVUS of sequences of in vivo coronary arteries containing metallic and bioabsorbable stents acquired through an international multicentric collaboration across five clinical centers. The method was able to detect the stent position with an overall F-measure of 86.4%, a Jaccard index score of 75% and a mean distance of 2.5 mm from manually annotated stent boundaries, and in bioabsorbable stents with an overall F-measure of 88.6%, a Jaccard score of 77.7 and a mean distance of 1.5 mm from manually annotated stent boundaries. Additionally, a map indicating the distance between the lumen and the stent along the pullback is created in order to show the angular sectors of the sequence in which the malapposition is present.
CONCLUSIONS:
Results obtained comparing the automatic results vs the manual annotation of two observers shows that the method approaches the interobserver variability. Similar performances are obtained on both metallic and bioabsorbable stents, showing the flexibility and robustness of the method. |
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MILAB; no proj |
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Admin @ si @ BCR2019 |
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3231 |
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Francesco Ciompi; Oriol Pujol; E Fernandez-Nofrerias; J. Mauri; Petia Radeva |
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Title |
Conditional Random Fields for image segmentation in Intravascular Ultrasound |
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2010 |
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Medical Image Computing in Catalunya: Graduate Student Workshop |
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13–14 |
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We present a Conditional Random Fields based approach for segmenting Intravascular Ultrasond (IVUS) images. The presented method uses a contextual discriminative graphical model to deal with the presence of distorsions and artifacts in IVUS images, that turns the segmentation of interesting regions into a difficult task. An accurate lumen segmentation on IVUS longitudinal images is achieved. |
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Girona |
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MICCAT |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ CPF2010 |
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1453 |
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Pierluigi Casale; Oriol Pujol; Petia Radeva |
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Title |
Classyfing Agitation in Sedated ICU Patients |
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2010 |
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Medical Image Computing in Catalunya: Graduate Student Workshop |
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19–20 |
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Agitation is a serious problem in sedated intensive care unit (ICU) patients. In this work, standard machine learning techniques working on wearable accelerometer data have been used to classifying agitation levels achieving very good classification performances. |
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Girona |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ COR2010 |
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1467 |
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Antonio Hernandez; Carlo Gatta; Petia Radeva; Laura Igual; R. Letaz; Sergio Escalera |
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Automatic Vessel Segmentation For Angiography and CT Registration |
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2010 |
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Medical Image Computing in Catalunya: Graduate Student Workshop |
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Notes |
MILAB;HUPBA |
Approved |
no |
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Call Number |
BCNPCL @ bcnpcl @ HGR2010 |
Serial |
1474 |
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| Permanent link to this record |
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Author |
Michal Drozdzal; Laura Igual; Jordi Vitria; Petia Radeva; C. Malagelada; Fernando Azpiroz |
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Title |
SIFT flow-based Sequences Alignment |
Type |
Conference Article |
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Year |
2010 |
Publication |
Medical Image Computing in Catalunya: Graduate Student Workshop |
Abbreviated Journal |
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Volume |
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Issue |
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Pages |
7–8 |
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Address |
Girona, Spain |
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MICCAT |
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Notes |
OR;MILAB;MV |
Approved |
no |
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Call Number |
BCNPCL @ bcnpcl @ DIV2010 |
Serial |
1475 |
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| Permanent link to this record |
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Author |
Miguel Reyes; Jordi Vitria; Petia Radeva; Sergio Escalera |
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Title |
Real-time Activity Monitoring of Inpatients |
Type |
Conference Article |
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Year |
2010 |
Publication |
Medical Image Computing in Catalunya: Graduate Student Workshop |
Abbreviated Journal |
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Volume |
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Issue |
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Pages |
35–36 |
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Keywords |
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Abstract |
In this paper, we present the development of an application capable of monitoring a set of patient vital signs in real time. The application has been designed to support the medical staff of a hospital. Preliminary results show the suitability
of the system to prevent the injury produced by the agitation of the patients. |
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Address |
Girona |
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Corporate Author |
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Thesis |
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Conference |
MICCAT |
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Notes |
OR;MILAB;HUPBA;MV |
Approved |
no |
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Call Number |
BCNPCL @ bcnpcl @ RVR2010 |
Serial |
1477 |
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| Permanent link to this record |
