Abstract: For millennia, the study of the couple brain-mind has fascinated the humanity in order to understand the complex nature of cognitive states. A cognitive state is the state of the mind at a specific time and involves cognition activities to acquire and process information for making a decision, solving a problem, or achieving a goal.
While normal cognitive states assist in the successful accomplishment of tasks; on the contrary, abnormal states of the mind can lead to task failures due to a reduced cognition capability. In this thesis, we focus on the assessment of cognitive states by means of the analysis of ElectroEncephaloGrams (EEG) signals using deep learning methods. EEG records the electrical activity of the brain using a set of electrodes placed on the scalp that output a set of spatiotemporal signals that are expected to be correlated to a specific mental process.
From the point of view of artificial intelligence, any method for the assessment of cognitive states using EEG signals as input should face several challenges. On the one hand, one should determine which is the most suitable approach for the optimal combination of the multiple signals recorded by EEG electrodes. On the other hand, one should have a protocol for the collection of good quality unambiguous annotated data, and an experimental design for the assessment of the generalization and transfer of models. In order to tackle them, first, we propose several convolutional neural architectures to perform data fusion of the signals recorded by EEG electrodes, at raw signal and feature levels. Four channel fusion methods, easy to incorporate into any neural network architecture, are proposed and assessed. Second, we present a method to create an unambiguous dataset for the prediction of cognitive mental workload using serious games and an Airbus-320 flight simulator. Third, we present a validation protocol that takes into account the levels of generalization of models based on the source and amount of test data.
Finally, the approaches for the assessment of cognitive states are applied to two use cases of high social impact: the assessment of mental workload for personalized support systems in the cockpit and the detection of epileptic seizures. The results obtained from the first use case show the feasibility of task transfer of models trained to detect workload in serious games to real flight scenarios. The results from the second use case show the generalization capability of our EEG channel fusion methods at k-fold cross-validation, patient-specific, and population levels.

Abstract: Colorectal cancer is one of the main causes of cancer death worldwide. Colonoscopy is the gold standard screening tool as it allows lesion detection and removal during the same procedure. During the last decades, several efforts have been made to develop CAD systems to assist clinicians in lesion detection and classification. Regarding the latter, and in order to be used in the exploration room as part of resect and discard or leave-in-situ strategies, these systems must identify correctly all different lesion types. This is a challenging task, as the data used to train these systems presents great inter-class similarity, high class imbalance, and low representation of clinically relevant histology classes such as serrated sessile adenomas.
In this paper, a new polyp segmentation and classification method, Swin-Expand, is introduced. Based on Swin-Transformer, it uses a simple and lightweight decoder. The performance of this method has been assessed on a novel dataset, comprising 1126 high-definition images representing the three main histological classes. Results show a clear improvement in both segmentation and classification performance, also achieving competitive results when tested in public datasets. These results confirm that both the method and the data are important to obtain more accurate polyp representations.

Abstract: Recent advances in single image super-resolution (SISR) explore the power of deep convolutional neural networks (CNNs) to achieve better performance. However, most of the progress has been made by scaling CNN architectures, which usually raise computational demands and memory consumption. This makes modern architectures less applicable in practice. In addition, most CNN-based SR methods do not fully utilize the informative hierarchical features that are helpful for final image recovery. In order to address these issues, we propose a directional variance attention network (DiVANet), a computationally efficient yet accurate network for SISR. Specifically, we introduce a novel directional variance attention (DiVA) mechanism to capture long-range spatial dependencies and exploit inter-channel dependencies simultaneously for more discriminative representations. Furthermore, we propose a residual attention feature group (RAFG) for parallelizing attention and residual block computation. The output of each residual block is linearly fused at the RAFG output to provide access to the whole feature hierarchy. In parallel, DiVA extracts most relevant features from the network for improving the final output and preventing information loss along the successive operations inside the network. Experimental results demonstrate the superiority of DiVANet over the state of the art in several datasets, while maintaining relatively low computation and memory footprint. The code is available at https://github.com/pbehjatii/DiVANet.

Abstract: A common goal of unpaired image-to-image translation is to preserve content consistency between source images and translated images while mimicking the style of the target domain. Due to biases between the datasets of both domains, many methods suffer from inconsistencies caused by the translation process. Most approaches introduced to mitigate these inconsistencies do not constrain the discriminator, leading to an even more ill-posed training setup. Moreover, none of these approaches is designed for larger crop sizes. In this work, we show that masking the inputs of a global discriminator for both domains with a content-based mask is sufficient to reduce content inconsistencies significantly. However, this strategy leads to artifacts that can be traced back to the masking process. To reduce these artifacts, we introduce a local discriminator that operates on pairs of small crops selected with a similarity sampling strategy. Furthermore, we apply this sampling strategy to sample global input crops from the source and target dataset. In addition, we propose feature-attentive denormalization to selectively incorporate content-based statistics into the generator stream. In our experiments, we show that our method achieves state-of-the-art performance in photorealistic sim-to-real translation and weather translation and also performs well in day-to-night translation. Additionally, we propose the cKVD metric, which builds on the sKVD metric and enables the examination of translation quality at the class or category level.

Abstract: Explainability methods have been widely used to provide insight into the decisions made by statistical models, thus facilitating their adoption in various domains within the industry. Counterfactual explanation methods aim to improve our understanding of a model by perturbing samples in a way that would alter its response in an unexpected manner. This information is helpful for users and for machine learning practitioners to understand and improve their models. Given the value provided by counterfactual explanations, there is a growing interest in the research community to investigate and propose new methods. However, we identify two issues that could hinder the progress in this field. (1) Existing metrics do not accurately reflect the value of an explainability method for the users. (2) Comparisons between methods are usually performed with datasets like CelebA, where images are annotated with attributes that do not fully describe them and with subjective attributes such as ``Attractive''. In this work, we address these problems by proposing an evaluation method with a principled metric to evaluate and compare different counterfactual explanation methods. The evaluation method is based on a synthetic dataset where images are fully described by their annotated attributes. As a result, we are able to perform a fair comparison of multiple explainability methods in the recent literature, obtaining insights about their performance. We make the code public for the benefit of the research community.

Abstract: Unsupervised representation learning aims at finding methods that learn representations from data without annotation-based signals. Abstaining from annotations not only leads to economic benefits but may – and to some extent already does – result in advantages regarding the representation’s structure, robustness, and generalizability to different tasks. In the long run, unsupervised methods are expected to surpass their supervised counterparts due to the reduction of human intervention and the inherently more general setup that does not bias the optimization towards an objective originating from specific annotation-based signals. While major advantages of unsupervised representation learning have been recently observed in natural language processing, supervised methods still dominate in vision domains for most tasks. In this dissertation, we contribute to the field of unsupervised (visual) representation learning from three perspectives: (i) Learning representations: We design unsupervised, backpropagation-free Convolutional Self-Organizing Neural Networks (CSNNs) that utilize self-organization- and Hebbian-based learning rules to learn convolutional kernels and masks to achieve deeper backpropagation-free models. Thereby, we observe that backpropagation-based and -free methods can suffer from an objective function mismatch between the unsupervised pretext task and the target task. This mismatch can lead to performance decreases for the target task. (ii) Evaluating representations: We build upon the widely used (non-)linear evaluation protocol to define pretext- and target-objective-independent metrics for measuring the objective function mismatch. With these metrics, we evaluate various pretext and target tasks and disclose dependencies of the objective function mismatch concerning different parts of the training and model setup. (iii) Transferring representations: We contribute CARLANE, the first 3-way sim-to-real domain adaptation benchmark for 2D lane detection. We adopt several well-known unsupervised domain adaptation methods as baselines and propose a method based on prototypical cross-domain self-supervised learning. Finally, we focus on pixel-based unsupervised domain adaptation and contribute a content-consistent unpaired image-to-image translation method that utilizes masks, global and local discriminators, and similarity sampling to mitigate content inconsistencies, as well as feature-attentive denormalization to fuse content-based statistics into the generator stream. In addition, we propose the cKVD metric to incorporate class-specific content inconsistencies into perceptual metrics for measuring translation quality.

Abstract: Class incremental semantic segmentation (CISS) focuses on alleviating catastrophic forgetting to improve discrimination. Previous work mainly exploit regularization (e.g., knowledge distillation) to maintain previous knowledge in the current model. However, distillation alone often yields limited gain to the model since only the representations of old and new models are restricted to be consistent. In this paper, we propose a simple yet effective method to obtain a model with strong memory of old knowledge, named Endpoints Weight Fusion (EWF). In our method, the model containing old knowledge is fused with the model retaining new knowledge in a dynamic fusion manner, strengthening the memory of old classes in ever-changing distributions. In addition, we analyze the relation between our fusion strategy and a popular moving average technique EMA, which reveals why our method is more suitable for class-incremental learning. To facilitate parameter fusion with closer distance in the parameter space, we use distillation to enhance the optimization process. Furthermore, we conduct experiments on two widely used datasets, achieving the state-of-the-art performance.