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Javier Selva, Anders S. Johansen, Sergio Escalera, Kamal Nasrollahi, Thomas B. Moeslund, & Albert Clapes. (2023). Video transformers: A survey. TPAMI - IEEE Transactions on Pattern Analysis and Machine Intelligence, 45(11), 12922–12943.
Abstract: Transformer models have shown great success handling long-range interactions, making them a promising tool for modeling video. However, they lack inductive biases and scale quadratically with input length. These limitations are further exacerbated when dealing with the high dimensionality introduced by the temporal dimension. While there are surveys analyzing the advances of Transformers for vision, none focus on an in-depth analysis of video-specific designs. In this survey, we analyze the main contributions and trends of works leveraging Transformers to model video. Specifically, we delve into how videos are handled at the input level first. Then, we study the architectural changes made to deal with video more efficiently, reduce redundancy, re-introduce useful inductive biases, and capture long-term temporal dynamics. In addition, we provide an overview of different training regimes and explore effective self-supervised learning strategies for video. Finally, we conduct a performance comparison on the most common benchmark for Video Transformers (i.e., action classification), finding them to outperform 3D ConvNets even with less computational complexity.
Keywords: Artificial Intelligence; Computer Vision; Self-Attention; Transformers; Video Representations
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Ruben Tito, Dimosthenis Karatzas, & Ernest Valveny. (2023). Hierarchical multimodal transformers for Multipage DocVQA. PR - Pattern Recognition, 144(109834).
Abstract: Existing work on DocVQA only considers single-page documents. However, in real applications documents are mostly composed of multiple pages that should be processed altogether. In this work, we propose a new multimodal hierarchical method Hi-VT5, that overcomes the limitations of current methods to process long multipage documents. In contrast to previous hierarchical methods that focus on different semantic granularity (He et al., 2021) or different subtasks (Zhou et al., 2022) used in image classification. Our method is a hierarchical transformer architecture where the encoder learns to summarize the most relevant information of every page and then, the decoder uses this summarized representation to generate the final answer, following a bottom-up approach. Moreover, due to the lack of multipage DocVQA datasets, we also introduce MP-DocVQA, an extension of SP-DocVQA where questions are posed over multipage documents instead of single pages. Through extensive experimentation, we demonstrate that Hi-VT5 is able, in a single stage, to answer the questions and provide the page that contains the answer, which can be used as a kind of explainability measure.
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Laura Igual, Joan Carles Soliva, Antonio Hernandez, Sergio Escalera, Xavier Jimenez, Oscar Vilarroya, et al. (2011). A fully-automatic caudate nucleus segmentation of brain MRI: Application in volumetric analysis of pediatric attention-deficit/hyperactivity disorder. BEO - BioMedical Engineering Online, 10(105), 1–23.
Abstract: Background
Accurate automatic segmentation of the caudate nucleus in magnetic resonance images (MRI) of the brain is of great interest in the analysis of developmental disorders. Segmentation methods based on a single atlas or on multiple atlases have been shown to suitably localize caudate structure. However, the atlas prior information may not represent the structure of interest correctly. It may therefore be useful to introduce a more flexible technique for accurate segmentations.
Method
We present Cau-dateCut: a new fully-automatic method of segmenting the caudate nucleus in MRI. CaudateCut combines an atlas-based segmentation strategy with the Graph Cut energy-minimization framework. We adapt the Graph Cut model to make it suitable for segmenting small, low-contrast structures, such as the caudate nucleus, by defining new energy function data and boundary potentials. In particular, we exploit information concerning the intensity and geometry, and we add supervised energies based on contextual brain structures. Furthermore, we reinforce boundary detection using a new multi-scale edgeness measure.
Results
We apply the novel CaudateCut method to the segmentation of the caudate nucleus to a new set of 39 pediatric attention-deficit/hyperactivity disorder (ADHD) patients and 40 control children, as well as to a public database of 18 subjects. We evaluate the quality of the segmentation using several volumetric and voxel by voxel measures. Our results show improved performance in terms of segmentation compared to state-of-the-art approaches, obtaining a mean overlap of 80.75%. Moreover, we present a quantitative volumetric analysis of caudate abnormalities in pediatric ADHD, the results of which show strong correlation with expert manual analysis.
Conclusion
CaudateCut generates segmentation results that are comparable to gold-standard segmentations and which are reliable in the analysis of differentiating neuroanatomical abnormalities between healthy controls and pediatric ADHD.
Keywords: Brain caudate nucleus; segmentation; MRI; atlas-based strategy; Graph Cut framework
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P. Canals, Simone Balocco, O. Diaz, J. Li, A. Garcia Tornel, M. Olive Gadea, et al. (2023). A fully automatic method for vascular tortuosity feature extraction in the supra-aortic region: unraveling possibilities in stroke treatment planning. CMIG - Computerized Medical Imaging and Graphics, 104(102170).
Abstract: Vascular tortuosity of supra-aortic vessels is widely considered one of the main reasons for failure and delays in endovascular treatment of large vessel occlusion in patients with acute ischemic stroke. Characterization of tortuosity is a challenging task due to the lack of objective, robust and effective analysis tools. We present a fully automatic method for arterial segmentation, vessel labelling and tortuosity feature extraction applied to the supra-aortic region. A sample of 566 computed tomography angiography scans from acute ischemic stroke patients (aged 74.8 ± 12.9, 51.0% females) were used for training, validation and testing of a segmentation module based on a U-Net architecture (162 cases) and a vessel labelling module powered by a graph U-Net (566 cases). Successively, 30 cases were processed for testing of a tortuosity feature extraction module. Measurements obtained through automatic processing were compared to manual annotations from two observers for a thorough validation of the method. The proposed feature extraction method presented similar performance to the inter-rater variability observed in the measurement of 33 geometrical and morphological features of the arterial anatomy in the supra-aortic region. This system will contribute to the development of more complex models to advance the treatment of stroke by adding immediate automation, objectivity, repeatability and robustness to the vascular tortuosity characterization of patients.
Keywords: Artificial intelligence; Deep learning; Stroke; Thrombectomy; Vascular feature extraction; Vascular tortuosity
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Carlo Gatta, Eloi Puertas, & Oriol Pujol. (2011). Multi-Scale Stacked Sequential Learning. PR - Pattern Recognition, 44(10-11), 2414–2416.
Abstract: One of the most widely used assumptions in supervised learning is that data is independent and identically distributed. This assumption does not hold true in many real cases. Sequential learning is the discipline of machine learning that deals with dependent data such that neighboring examples exhibit some kind of relationship. In the literature, there are different approaches that try to capture and exploit this correlation, by means of different methodologies. In this paper we focus on meta-learning strategies and, in particular, the stacked sequential learning approach. The main contribution of this work is two-fold: first, we generalize the stacked sequential learning. This generalization reflects the key role of neighboring interactions modeling. Second, we propose an effective and efficient way of capturing and exploiting sequential correlations that takes into account long-range interactions by means of a multi-scale pyramidal decomposition of the predicted labels. Additionally, this new method subsumes the standard stacked sequential learning approach. We tested the proposed method on two different classification tasks: text lines classification in a FAQ data set and image classification. Results on these tasks clearly show that our approach outperforms the standard stacked sequential learning. Moreover, we show that the proposed method allows to control the trade-off between the detail and the desired range of the interactions.
Keywords: Stacked sequential learning; Multiscale; Multiresolution; Contextual classification
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F.X. Perez, F. Javier Sanchez, Xavier Binefa, Xavier Roca, Jordi Vitria, & Juan J. Villanueva. (1993). A mathematical morphology-based system for IC´s inspection and analysis. In Institute of Physics Conferences Series (Vol. 135, 381–384). Institute of Physics.
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X. Binefa, F. Javier Sanchez, F.X. Perez, Xavier Roca, Jordi Vitria, & Juan J. Villanueva. (1993). Using defocus in optical inspection of integrated circuits. In Institute of Physics Conferences Series (Vol. 135, pp. 389–392). Institute of Physics.
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E. Provenzi, Carlo Gatta, M. Fierro, & A. Rizzi. (2008). A Spatially Variant White-Patch and Gray-World Method for Color Image Enhancement Driven by Local Constant. TPAMI - IEEE Transactions on Pattern Analysis and Machine Intelligence, 1757–1770.
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Robert Benavente, Maria Vanrell, & Ramon Baldrich. (2008). Parametric Fuzzy Sets for Automatic Color Naming. Journal of the Optical Society of America A, 2582–2593.
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Jordi Gonzalez, Dani Rowe, J. Varona, & Xavier Roca. (2009). Understanding Dynamic Scenes based on Human Sequence Evaluation. IMAVIS - Image and Vision Computing, 27(10), 1433–1444.
Abstract: In this paper, a Cognitive Vision System (CVS) is presented, which explains the human behaviour of monitored scenes using natural-language texts. This cognitive analysis of human movements recorded in image sequences is here referred to as Human Sequence Evaluation (HSE) which defines a set of transformation modules involved in the automatic generation of semantic descriptions from pixel values. In essence, the trajectories of human agents are obtained to generate textual interpretations of their motion, and also to infer the conceptual relationships of each agent w.r.t. its environment. For this purpose, a human behaviour model based on Situation Graph Trees (SGTs) is considered, which permits both bottom-up (hypothesis generation) and top-down (hypothesis refinement) analysis of dynamic scenes. The resulting system prototype interprets different kinds of behaviour and reports textual descriptions in multiple languages.
Keywords: Image Sequence Evaluation; High-level processing of monitored scenes; Segmentation and tracking in complex scenes; Event recognition in dynamic scenes; Human motion understanding; Human behaviour interpretation; Natural-language text generation; Realistic demonstrators
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Josep Llados, Enric Marti, & Juan J.Villanueva. (2001). Symbol recognition by error-tolerant subgraph matching between region adjacency graphs. IEEE Transactions on Pattern Analysis and Machine Intelligence, 23(10), 1137–1143.
Abstract: The recognition of symbols in graphic documents is an intensive research activity in the community of pattern recognition and document analysis. A key issue in the interpretation of maps, engineering drawings, diagrams, etc. is the recognition of domain dependent symbols according to a symbol database. In this work we first review the most outstanding symbol recognition methods from two different points of view: application domains and pattern recognition methods. In the second part of the paper, open and unaddressed problems involved in symbol recognition are described, analyzing their current state of art and discussing future research challenges. Thus, issues such as symbol representation, matching, segmentation, learning, scalability of recognition methods and performance evaluation are addressed in this work. Finally, we discuss the perspectives of symbol recognition concerning to new paradigms such as user interfaces in handheld computers or document database and WWW indexing by graphical content.
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Ariel Amato, Mikhail Mozerov, Andrew Bagdanov, & Jordi Gonzalez. (2011). Accurate Moving Cast Shadow Suppression Based on Local Color Constancy detection. TIP - IEEE Transactions on Image Processing, 20(10), 2954–2966.
Abstract: This paper describes a novel framework for detection and suppression of properly shadowed regions for most possible scenarios occurring in real video sequences. Our approach requires no prior knowledge about the scene, nor is it restricted to specific scene structures. Furthermore, the technique can detect both achromatic and chromatic shadows even in the presence of camouflage that occurs when foreground regions are very similar in color to shadowed regions. The method exploits local color constancy properties due to reflectance suppression over shadowed regions. To detect shadowed regions in a scene, the values of the background image are divided by values of the current frame in the RGB color space. We show how this luminance ratio can be used to identify segments with low gradient constancy, which in turn distinguish shadows from foreground. Experimental results on a collection of publicly available datasets illustrate the superior performance of our method compared with the most sophisticated, state-of-the-art shadow detection algorithms. These results show that our approach is robust and accurate over a broad range of shadow types and challenging video conditions.
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Xavier Carrillo, E Fernandez-Nofrerias, Francesco Ciompi, Oriol Rodriguez-Leor, Petia Radeva, Neus Salvatella, et al. (2011). Changes in Radial Artery Volume Assessed Using Intravascular Ultrasound: A Comparison of Two Vasodilator Regimens in Transradial Coronary Intervention. JOIC - Journal of Invasive Cardiology, 23(10), 401–404.
Abstract: OBJECTIVES:
This study used intravascular ultrasound (IVUS) to evaluate radial artery volume changes after intraarterial administration of nitroglycerin and/or verapamil.
BACKGROUND:
Radial artery spasm, which is associated with radial artery size, is the main limitation of the transradial approach in percutaneous coronary interventions (PCI).
METHODS:
This prospective, randomized study compared the effect of two intra-arterial vasodilator regimens on radial artery volume: 0.2 mg of nitroglycerin plus 2.5 mg of verapamil (Group 1; n = 15) versus 2.5 mg of verapamil alone (Group 2; n = 15). Radial artery lumen volume was assessed using IVUS at two time points: at baseline (5 minutes after sheath insertion) and post-vasodilator (1 minute after drug administration). The luminal volume of the radial artery was computed using ECOC Random Fields (ECOC-RF), a technique used for automatic segmentation of luminal borders in longitudinal cut images from IVUS sequences.
RESULTS:
There was a significant increase in arterial lumen volume in both groups, with an increase from 451 ± 177 mm³ to 508 ± 192 mm³ (p = 0.001) in Group 1 and from 456 ± 188 mm³ to 509 ± 170 mm³ (p = 0.001) in Group 2. There were no significant differences between the groups in terms of absolute volume increase (58 mm³ versus 53 mm³, respectively; p = 0.65) or in relative volume increase (14% versus 20%, respectively; p = 0.69).
CONCLUSIONS:
Administration of nitroglycerin plus verapamil or verapamil alone to the radial artery resulted in similar increases in arterial lumen volume according to ECOC-RF IVUS measurements.
Keywords: radial; vasodilator treatment; percutaneous coronary intervention; IVUS; volumetric IVUS analysis
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Mohammad Ali Bagheri, Qigang Gao, & Sergio Escalera. (2013). A Genetic-based Subspace Analysis Method for Improving Error-Correcting Output Coding. PR - Pattern Recognition, 46(10), 2830–2839.
Abstract: Two key factors affecting the performance of Error Correcting Output Codes (ECOC) in multiclass classification problems are the independence of binary classifiers and the problem-dependent coding design. In this paper, we propose an evolutionary algorithm-based approach to the design of an application-dependent codematrix in the ECOC framework. The central idea of this work is to design a three-dimensional codematrix, where the third dimension is the feature space of the problem domain. In order to do that, we consider the feature space in the design process of the codematrix with the aim of improving the independence and accuracy of binary classifiers. The proposed method takes advantage of some basic concepts of ensemble classification, such as diversity of classifiers, and also benefits from the evolutionary approach for optimizing the three-dimensional codematrix, taking into account the problem domain. We provide a set of experimental results using a set of benchmark datasets from the UCI Machine Learning Repository, as well as two real multiclass Computer Vision problems. Both sets of experiments are conducted using two different base learners: Neural Networks and Decision Trees. The results show that the proposed method increases the classification accuracy in comparison with the state-of-the-art ECOC coding techniques.
Keywords: Error Correcting Output Codes; Evolutionary computation; Multiclass classification; Feature subspace; Ensemble classification
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Cesar Isaza, Joaquin Salas, & Bogdan Raducanu. (2012). Evaluation of Intrinsic Image Algorithms to Detect the Shadows Cast by Static Objects Outdoors. SENS - Sensors, 12(10), 13333–13348.
Abstract: In some automatic scene analysis applications, the presence of shadows becomes a nuisance that is necessary to deal with. As a consequence, a preliminary stage in many computer vision algorithms is to attenuate their effect. In this paper, we focus our attention on the detection of shadows cast by static objects outdoors, as the scene is viewed for extended periods of time (days, weeks) from a fixed camera and considering daylight intervals where the main source of light is the sun. In this context, we report two contributions. First, we introduce the use of synthetic images for which ground truth can be generated automatically, avoiding the tedious effort of manual annotation. Secondly, we report a novel application of the intrinsic image concept to the automatic detection of shadows cast by static objects in outdoors. We make both a quantitative and a qualitative evaluation of several algorithms based on this image representation. For the quantitative evaluation, we used the synthetic data set, while for the qualitative evaluation we used both data sets. Our experimental results show that the evaluated methods can partially solve the problem of shadow detection.
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