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	Author	Carola Figueroa Flores; Bogdan Raducanu; David Berga; Joost Van de Weijer
	Title	Hallucinating Saliency Maps for Fine-Grained Image Classification for Limited Data Domains			Type	Conference Article
	Year	2021	Publication	16th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications	Abbreviated Journal
	Volume	4	Issue		Pages	163-171
	Keywords
	Abstract	arXiv:2007.12562 Most of the saliency methods are evaluated on their ability to generate saliency maps, and not on their functionality in a complete vision pipeline, like for instance, image classification. In the current paper, we propose an approach which does not require explicit saliency maps to improve image classification, but they are learned implicitely, during the training of an end-to-end image classification task. We show that our approach obtains similar results as the case when the saliency maps are provided explicitely. Combining RGB data with saliency maps represents a significant advantage for object recognition, especially for the case when training data is limited. We validate our method on several datasets for fine-grained classification tasks (Flowers, Birds and Cars). In addition, we show that our saliency estimation method, which is trained without any saliency groundtruth data, obtains competitive results on real image saliency benchmark (Toronto), and outperforms deep saliency models with synthetic images (SID4VAM).
	Address	Virtual; February 2021
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	VISAPP
	Notes	LAMP			Approved	no
	Call Number	Admin @ si @ FRB2021c			Serial	3540
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	Author	Mireia Sole; Joan Blanco; Debora Gil; Oliver Valero; Alvaro Pascual; B. Cardenas; G. Fonseka; E. Anton; Richard Frodsham; Francesca Vidal; Zaida Sarrate
	Title	Chromosomal positioning in spermatogenic cells is influenced by chromosomal factors associated with gene activity, bouquet formation, and meiotic sex-chromosome inactivation			Type	Journal Article
	Year	2021	Publication	Chromosoma	Abbreviated Journal
	Volume	130	Issue		Pages	163-175
	Keywords
	Abstract	Chromosome territoriality is not random along the cell cycle and it is mainly governed by intrinsic chromosome factors and gene expression patterns. Conversely, very few studies have explored the factors that determine chromosome territoriality and its influencing factors during meiosis. In this study, we analysed chromosome positioning in murine spermatogenic cells using three-dimensionally fluorescence in situ hybridization-based methodology, which allows the analysis of the entire karyotype. The main objective of the study was to decipher chromosome positioning in a radial axis (all analysed germ-cell nuclei) and longitudinal axis (only spermatozoa) and to identify the chromosomal factors that regulate such an arrangement. Results demonstrated that the radial positioning of chromosomes during spermatogenesis was cell-type specific and influenced by chromosomal factors associated to gene activity. Chromosomes with specific features that enhance transcription (high GC content, high gene density and high numbers of predicted expressed genes) were preferentially observed in the inner part of the nucleus in virtually all cell types. Moreover, the position of the sex chromosomes was influenced by their transcriptional status, from the periphery of the nucleus when its activity was repressed (pachytene) to a more internal position when it is partially activated (spermatid). At pachytene, chromosome positioning was also influenced by chromosome size due to the bouquet formation. Longitudinal chromosome positioning in the sperm nucleus was not random either, suggesting the importance of ordered longitudinal positioning for the release and activation of the paternal genome after fertilisation.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	IAM; 600.145			Approved	no
	Call Number	Admin @ si @ SBG2021			Serial	3592
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	Author	Arka Ujjal Dey; Suman Ghosh; Ernest Valveny; Gaurav Harit
	Title	Beyond Visual Semantics: Exploring the Role of Scene Text in Image Understanding			Type	Journal Article
	Year	2021	Publication	Pattern Recognition Letters	Abbreviated Journal	PRL
	Volume	149	Issue		Pages	164-171
	Keywords
	Abstract	Images with visual and scene text content are ubiquitous in everyday life. However, current image interpretation systems are mostly limited to using only the visual features, neglecting to leverage the scene text content. In this paper, we propose to jointly use scene text and visual channels for robust semantic interpretation of images. We do not only extract and encode visual and scene text cues, but also model their interplay to generate a contextual joint embedding with richer semantics. The contextual embedding thus generated is applied to retrieval and classification tasks on multimedia images, with scene text content, to demonstrate its effectiveness. In the retrieval framework, we augment our learned text-visual semantic representation with scene text cues, to mitigate vocabulary misses that may have occurred during the semantic embedding. To deal with irrelevant or erroneous recognition of scene text, we also apply query-based attention to our text channel. We show how the multi-channel approach, involving visual semantics and scene text, improves upon state of the art.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.121			Approved	no
	Call Number	Admin @ si @ DGV2021			Serial	3364
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	Author	Patricia Suarez; Dario Carpio; Angel Sappa
	Title	Non-homogeneous Haze Removal Through a Multiple Attention Module Architecture			Type	Conference Article
	Year	2021	Publication	16th International Symposium on Visual Computing	Abbreviated Journal
	Volume	13018	Issue		Pages	178–190
	Keywords
	Abstract	This paper presents a novel attention based architecture to remove non-homogeneous haze. The proposed model is focused on obtaining the most representative characteristics of the image, at each learning cycle, by means of adaptive attention modules coupled with a residual learning convolutional network. The latter is based on the Res2Net model. The proposed architecture is trained with just a few set of images. Its performance is evaluated on a public benchmark—images from the non-homogeneous haze NTIRE 2021 challenge—and compared with state of the art approaches reaching the best result.
	Address	Virtual; October 2021
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ISVC
	Notes	MSIAU			Approved	no
	Call Number	Admin @ si @ SCS2021			Serial	3668
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	Author	Patricia Suarez; Angel Sappa; Boris X. Vintimilla
	Title	Deep learning-based vegetation index estimation			Type	Book Chapter
	Year	2021	Publication	Generative Adversarial Networks for Image-to-Image Translation	Abbreviated Journal
	Volume		Issue		Pages	205-234
	Keywords
	Abstract	Chapter 9
	Address
	Corporate Author				Thesis
	Publisher	Elsevier	Place of Publication		Editor	A.Solanki; A.Nayyar; M.Naved
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	MSIAU; 600.122			Approved	no
	Call Number	Admin @ si @ SSV2021a			Serial	3578
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	Author	Minesh Mathew; Lluis Gomez; Dimosthenis Karatzas; C.V. Jawahar
	Title	Asking questions on handwritten document collections			Type	Journal Article
	Year	2021	Publication	International Journal on Document Analysis and Recognition	Abbreviated Journal	IJDAR
	Volume	24	Issue		Pages	235-249
	Keywords
	Abstract	This work addresses the problem of Question Answering (QA) on handwritten document collections. Unlike typical QA and Visual Question Answering (VQA) formulations where the answer is a short text, we aim to locate a document snippet where the answer lies. The proposed approach works without recognizing the text in the documents. We argue that the recognition-free approach is suitable for handwritten documents and historical collections where robust text recognition is often difficult. At the same time, for human users, document image snippets containing answers act as a valid alternative to textual answers. The proposed approach uses an off-the-shelf deep embedding network which can project both textual words and word images into a common sub-space. This embedding bridges the textual and visual domains and helps us retrieve document snippets that potentially answer a question. We evaluate results of the proposed approach on two new datasets: (i) HW-SQuAD: a synthetic, handwritten document image counterpart of SQuAD1.0 dataset and (ii) BenthamQA: a smaller set of QA pairs defined on documents from the popular Bentham manuscripts collection. We also present a thorough analysis of the proposed recognition-free approach compared to a recognition-based approach which uses text recognized from the images using an OCR. Datasets presented in this work are available to download at docvqa.org.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.121			Approved	no
	Call Number	Admin @ si @ MGK2021			Serial	3621
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	Author	Lluis Gomez; Ali Furkan Biten; Ruben Tito; Andres Mafla; Marçal Rusiñol; Ernest Valveny; Dimosthenis Karatzas
	Title	Multimodal grid features and cell pointers for scene text visual question answering			Type	Journal Article
	Year	2021	Publication	Pattern Recognition Letters	Abbreviated Journal	PRL
	Volume	150	Issue		Pages	242-249
	Keywords
	Abstract	This paper presents a new model for the task of scene text visual question answering. In this task questions about a given image can only be answered by reading and understanding scene text. Current state of the art models for this task make use of a dual attention mechanism in which one attention module attends to visual features while the other attends to textual features. A possible issue with this is that it makes difficult for the model to reason jointly about both modalities. To fix this problem we propose a new model that is based on an single attention mechanism that attends to multi-modal features conditioned to the question. The output weights of this attention module over a grid of multi-modal spatial features are interpreted as the probability that a certain spatial location of the image contains the answer text to the given question. Our experiments demonstrate competitive performance in two standard datasets with a model that is faster than previous methods at inference time. Furthermore, we also provide a novel analysis of the ST-VQA dataset based on a human performance study. Supplementary material, code, and data is made available through this link.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.084; 600.121			Approved	no
	Call Number	Admin @ si @ GBT2021			Serial	3620
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	Author	Jose Elias Yauri; Aura Hernandez-Sabate; Pau Folch; Debora Gil
	Title	Mental Workload Detection Based on EEG Analysis			Type	Conference Article
	Year	2021	Publication	Artificial Intelligent Research and Development. Proceedings 23rd International Conference of the Catalan Association for Artificial Intelligence.	Abbreviated Journal
	Volume	339	Issue		Pages	268-277
	Keywords	Cognitive states; Mental workload; EEG analysis; Neural Networks.
	Abstract	The study of mental workload becomes essential for human work efficiency, health conditions and to avoid accidents, since workload compromises both performance and awareness. Although workload has been widely studied using several physiological measures, minimising the sensor network as much as possible remains both a challenge and a requirement. Electroencephalogram (EEG) signals have shown a high correlation to specific cognitive and mental states like workload. However, there is not enough evidence in the literature to validate how well models generalize in case of new subjects performing tasks of a workload similar to the ones included during model’s training. In this paper we propose a binary neural network to classify EEG features across different mental workloads. Two workloads, low and medium, are induced using two variants of the N-Back Test. The proposed model was validated in a dataset collected from 16 subjects and shown a high level of generalization capability: model reported an average recall of 81.81% in a leave-one-out subject evaluation.
	Address	Virtual; October 20-22 2021
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CCIA
	Notes	IAM; 600.139; 600.118; 600.145			Approved	no
	Call Number	Admin @ si @			Serial	3723
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	Author	Sanket Biswas; Pau Riba; Josep Llados; Umapada Pal
	Title	Beyond Document Object Detection: Instance-Level Segmentation of Complex Layouts			Type	Journal Article
	Year	2021	Publication	International Journal on Document Analysis and Recognition	Abbreviated Journal	IJDAR
	Volume	24	Issue		Pages	269–281
	Keywords
	Abstract	Information extraction is a fundamental task of many business intelligence services that entail massive document processing. Understanding a document page structure in terms of its layout provides contextual support which is helpful in the semantic interpretation of the document terms. In this paper, inspired by the progress of deep learning methodologies applied to the task of object recognition, we transfer these models to the specific case of document object detection, reformulating the traditional problem of document layout analysis. Moreover, we importantly contribute to prior arts by defining the task of instance segmentation on the document image domain. An instance segmentation paradigm is especially important in complex layouts whose contents should interact for the proper rendering of the page, i.e., the proper text wrapping around an image. Finally, we provide an extensive evaluation, both qualitative and quantitative, that demonstrates the superior performance of the proposed methodology over the current state of the art.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	DAG; 600.121; 600.140; 110.312			Approved	no
	Call Number	Admin @ si @ BRL2021b			Serial	3574
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	Author	Adria Molina; Pau Riba; Lluis Gomez; Oriol Ramos Terrades; Josep Llados
	Title	Date Estimation in the Wild of Scanned Historical Photos: An Image Retrieval Approach			Type	Conference Article
	Year	2021	Publication	16th International Conference on Document Analysis and Recognition	Abbreviated Journal
	Volume	12822	Issue		Pages	306-320
	Keywords
	Abstract	This paper presents a novel method for date estimation of historical photographs from archival sources. The main contribution is to formulate the date estimation as a retrieval task, where given a query, the retrieved images are ranked in terms of the estimated date similarity. The closer are their embedded representations the closer are their dates. Contrary to the traditional models that design a neural network that learns a classifier or a regressor, we propose a learning objective based on the nDCG ranking metric. We have experimentally evaluated the performance of the method in two different tasks: date estimation and date-sensitive image retrieval, using the DEW public database, overcoming the baseline methods.
	Address	Lausanne; Suissa; September 2021
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICDAR
	Notes	DAG; 600.121; 600.140; 110.312			Approved	no
	Call Number	Admin @ si @ MRG2021b			Serial	3571
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	Author	Joan Codina-Filba; Sergio Escalera; Joan Escudero; Coen Antens; Pau Buch-Cardona; Mireia Farrus
	Title	Mobile eHealth Platform for Home Monitoring of Bipolar Disorder			Type	Conference Article
	Year	2021	Publication	27th ACM International Conference on Multimedia Modeling	Abbreviated Journal
	Volume	12573	Issue		Pages	330-341
	Keywords
	Abstract	People suffering Bipolar Disorder (BD) experiment changes in mood status having depressive or manic episodes with normal periods in the middle. BD is a chronic disease with a high level of non-adherence to medication that needs a continuous monitoring of patients to detect when they relapse in an episode, so that physicians can take care of them. Here we present MoodRecord, an easy-to-use, non-intrusive, multilingual, robust and scalable platform suitable for home monitoring patients with BD, that allows physicians and relatives to track the patient state and get alarms when abnormalities occur. MoodRecord takes advantage of the capabilities of smartphones as a communication and recording device to do a continuous monitoring of patients. It automatically records user activity, and asks the user to answer some questions or to record himself in video, according to a predefined plan designed by physicians. The video is analysed, recognising the mood status from images and bipolar assessment scores are extracted from speech parameters. The data obtained from the different sources are merged periodically to observe if a relapse may start and if so, raise the corresponding alarm. The application got a positive evaluation in a pilot with users from three different countries. During the pilot, the predictions of the voice and image modules showed a coherent correlation with the diagnosis performed by clinicians.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title	LNCS
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	MMM
	Notes	HUPBA; no proj			Approved	no
	Call Number	Admin @ si @ CEE2021			Serial	3659
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	Author	Kaustubh Kulkarni; Ciprian Corneanu; Ikechukwu Ofodile; Sergio Escalera; Xavier Baro; Sylwia Hyniewska; Juri Allik; Gholamreza Anbarjafari
	Title	Automatic Recognition of Facial Displays of Unfelt Emotions			Type	Journal Article
	Year	2021	Publication	IEEE Transactions on Affective Computing	Abbreviated Journal	TAC
	Volume	12	Issue	2	Pages	377 - 390
	Keywords
	Abstract	Humans modify their facial expressions in order to communicate their internal states and sometimes to mislead observers regarding their true emotional states. Evidence in experimental psychology shows that discriminative facial responses are short and subtle. This suggests that such behavior would be easier to distinguish when captured in high resolution at an increased frame rate. We are proposing SASE-FE, the first dataset of facial expressions that are either congruent or incongruent with underlying emotion states. We show that overall the problem of recognizing whether facial movements are expressions of authentic emotions or not can be successfully addressed by learning spatio-temporal representations of the data. For this purpose, we propose a method that aggregates features along fiducial trajectories in a deeply learnt space. Performance of the proposed model shows that on average, it is easier to distinguish among genuine facial expressions of emotion than among unfelt facial expressions of emotion and that certain emotion pairs such as contempt and disgust are more difficult to distinguish than the rest. Furthermore, the proposed methodology improves state of the art results on CK+ and OULU-CASIA datasets for video emotion recognition, and achieves competitive results when classifying facial action units on BP4D datase.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HUPBA; no proj			Approved	no
	Call Number	Admin @ si @ KCO2021			Serial	3658
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	Author	Pau Riba; Adria Molina; Lluis Gomez; Oriol Ramos Terrades; Josep Llados
	Title	Learning to Rank Words: Optimizing Ranking Metrics for Word Spotting			Type	Conference Article
	Year	2021	Publication	16th International Conference on Document Analysis and Recognition	Abbreviated Journal
	Volume	12822	Issue		Pages	381–395
	Keywords
	Abstract	In this paper, we explore and evaluate the use of ranking-based objective functions for learning simultaneously a word string and a word image encoder. We consider retrieval frameworks in which the user expects a retrieval list ranked according to a defined relevance score. In the context of a word spotting problem, the relevance score has been set according to the string edit distance from the query string. We experimentally demonstrate the competitive performance of the proposed model on query-by-string word spotting for both, handwritten and real scene word images. We also provide the results for query-by-example word spotting, although it is not the main focus of this work.
	Address	Lausanne; Suissa; September 2021
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	ICDAR
	Notes	DAG; 600.121; 600.140; 110.312			Approved	no
	Call Number	Admin @ si @ RMG2021			Serial	3572
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	Author	Javad Zolfaghari Bengar; Bogdan Raducanu; Joost Van de Weijer
	Title	When Deep Learners Change Their Mind: Learning Dynamics for Active Learning			Type	Conference Article
	Year	2021	Publication	19th International Conference on Computer Analysis of Images and Patterns	Abbreviated Journal
	Volume	13052	Issue	1	Pages	403-413
	Keywords
	Abstract	Active learning aims to select samples to be annotated that yield the largest performance improvement for the learning algorithm. Many methods approach this problem by measuring the informativeness of samples and do this based on the certainty of the network predictions for samples. However, it is well-known that neural networks are overly confident about their prediction and are therefore an untrustworthy source to assess sample informativeness. In this paper, we propose a new informativeness-based active learning method. Our measure is derived from the learning dynamics of a neural network. More precisely we track the label assignment of the unlabeled data pool during the training of the algorithm. We capture the learning dynamics with a metric called label-dispersion, which is low when the network consistently assigns the same label to the sample during the training of the network and high when the assigned label changes frequently. We show that label-dispersion is a promising predictor of the uncertainty of the network, and show on two benchmark datasets that an active learning algorithm based on label-dispersion obtains excellent results.
	Address	September 2021
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference	CAIP
	Notes	LAMP;			Approved	no
	Call Number	Admin @ si @ ZRV2021			Serial	3673
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	Author	Clementine Decamps; Alexis Arnaud; Florent Petitprez; Mira Ayadi; Aurelia Baures; Lucile Armenoult; Sergio Escalera; Isabelle Guyon; Remy Nicolle; Richard Tomasini; Aurelien de Reynies; Jerome Cros; Yuna Blum; Magali Richard
	Title	DECONbench: a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification			Type	Journal Article
	Year	2021	Publication	BMC Bioinformatics	Abbreviated Journal
	Volume	22	Issue		Pages	473
	Keywords
	Abstract	Quantification of tumor heterogeneity is essential to better understand cancer progression and to adapt therapeutic treatments to patient specificities. Bioinformatic tools to assess the different cell populations from single-omic datasets as bulk transcriptome or methylome samples have been recently developed, including reference-based and reference-free methods. Improved methods using multi-omic datasets are yet to be developed in the future and the community would need systematic tools to perform a comparative evaluation of these algorithms on controlled data.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	HUPBA; no proj			Approved	no
	Call Number	Admin @ si @ DAP2021			Serial	3650
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