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Alejandro Gonzalez Alzate. (2015). Multi-modal Pedestrian Detection (David Vazquez, Antonio Lopez, &, Ed.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Pedestrian detection continues to be an extremely challenging problem in real scenarios, in which situations like illumination changes, noisy images, unexpected objects, uncontrolled scenarios and variant appearance of objects occur constantly. All these problems force the development of more robust detectors for relevant applications like vision-based autonomous vehicles, intelligent surveillance, and pedestrian tracking for behavior analysis. Most reliable vision-based pedestrian detectors base their decision on features extracted using a single sensor capturing complementary features, e.g., appearance, and texture. These features usually are extracted from the current frame, ignoring temporal information, or including it in a post process step e.g., tracking or temporal coherence. Taking into account these issues we formulate the following question: can we generate more robust pedestrian detectors by introducing new information sources in the feature extraction step?
In order to answer this question we develop different approaches for introducing new information sources to well-known pedestrian detectors. We start by the inclusion of temporal information following the Stacked Sequential Learning (SSL) paradigm which suggests that information extracted from the neighboring samples in a sequence can improve the accuracy of a base classifier. We then focus on the inclusion of complementary information from different sensors like 3D point clouds (LIDAR – depth), far infrared images (FIR), or disparity maps (stereo pair cameras). For this end we develop a multi-modal framework in which information from different sensors is used for increasing detection accuracy (by increasing information redundancy). Finally we propose a multi-view pedestrian detector, this multi-view approach splits the detection problem in n sub-problems. Each sub-problem will detect objects in a given specific view reducing in that way the variability problem faced when a single detectors is used for the whole problem. We show that these approaches obtain competitive results with other state-of-the-art methods but instead of design new features, we reuse existing ones boosting their performance. |
Jaume Garcia. (2009). Statistical Models of the Architecture and Function of the Left Ventricle (Debora Gil, Ed.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Cardiovascular Diseases, specially those affecting the Left Ventricle (LV), are the leading cause of death in developed countries with approximately a 30% of all global deaths. In order to address this public health concern, physicians focus on diagnosis and therapy planning. On one hand, early and accurate detection of Regional Wall Motion Abnormalities (RWMA) significantly contributes to a quick diagnosis and prevents the patient to reach more severe stages. On the other hand, a thouroughly knowledge of the normal gross anatomy of the LV, as well as, the distribution of its muscular fibers is crucial for designing specific interventions and therapies (such as pacemaker implanction). Statistical models obtained from the analysis of different imaging modalities allow the computation of the normal ranges of variation within a given population. Normality models are a valuable tool for the definition of objective criterions quantifying the degree of (anomalous) deviation of the LV function and anatomy for a given subject. The creation of statistical models involve addressing three main issues: extraction of data from images, definition of a common domain for comparison of data across patients and designing appropriate statistical analysis schemes. In this PhD thesis we present generic image processing tools for the creation of statistical models of the LV anatomy and function. On one hand, we use differential geometry concepts to define a computational framework (the Normalized Parametric Domain, NPD) suitable for the comparison and fusion of several clinical scores obtained over the LV. On the other hand, we present a variational approach (the Harmonic Phase Flow, HPF) for the estimation of myocardial motion that provides dense and continuous vector fields without overestimating motion at injured areas. These tools are used for the creation of statistical models. Regarding anatomy, we obtain an atlas jointly modelling, both, LV gross anatomy and fiber architecture. Regarding function, we compute normality patterns of scores characterizing the (global and local) LV function and explore, for the first time, the configuration of local scores better suited for RWMA detection.
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Aura Hernandez-Sabate. (2009). Exploring Arterial Dynamics and Structures in IntraVascular Ultrasound Sequences (Debora Gil, Ed.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Cardiovascular diseases are a leading cause of death in developed countries. Most of them are caused by arterial (specially coronary) diseases, mainly caused by plaque accumulation. Such pathology narrows blood flow (stenosis) and affects artery bio- mechanical elastic properties (atherosclerosis). In the last decades, IntraVascular UltraSound (IVUS) has become a usual imaging technique for the diagnosis and follow up of arterial diseases. IVUS is a catheter-based imaging technique which shows a sequence of cross sections of the artery under study. Inspection of a single image gives information about the percentage of stenosis. Meanwhile, inspection of longitudinal views provides information about artery bio-mechanical properties, which can prevent a fatal outcome of the cardiovascular disease. On one hand, dynamics of arteries (due to heart pumping among others) is a major artifact for exploring tissue bio-mechanical properties. On the other one, manual stenosis measurements require a manual tracing of vessel borders, which is a time-consuming task and might suffer from inter-observer variations. This PhD thesis proposes several image processing tools for exploring vessel dy- namics and structures. We present a physics-based model to extract, analyze and correct vessel in-plane rigid dynamics and to retrieve cardiac phase. Furthermore, we introduce a deterministic-statistical method for automatic vessel borders detection. In particular, we address adventitia layer segmentation. An accurate validation pro- tocol to ensure reliable clinical applicability of the methods is a crucial step in any proposal of an algorithm. In this thesis we take special care in designing a valida- tion protocol for each approach proposed and we contribute to the in vivo dynamics validation with a quantitative and objective score to measure the amount of motion suppressed.
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Carles Sanchez. (2011). Tracheal ring detection in bronchoscopy (F. J. S. Debora Gil, Ed.) (Vol. 168). Master's thesis, , .
Abstract: Endoscopy is the process in which a camera is introduced inside a human.
Given that endoscopy provides realistic images (in contrast to other modalities) and allows non-invase minimal intervention procedures (which can aid in diagnosis and surgical interventions), its use has spreaded during last decades. In this project we will focus on bronchoscopic procedures, during which the camera is introduced through the trachea in order to have a diagnostic of the patient. The diagnostic interventions are focused on: degree of stenosis (reduction in tracheal area), prosthesis or early diagnosis of tumors. In the first case, assessment of the luminal area and the calculation of the diameters of the tracheal rings are required. A main limitation is that all the process is done by hand, which means that the doctor takes all the measurements and decisions just by looking at the screen. As far as we know there is no computational framework for helping the doctors in the diagnosis. This project will consist of analysing bronchoscopic videos in order to extract useful information for the diagnostic of the degree of stenosis. In particular we will focus on segmentation of the tracheal rings. As a result of this project several strategies (for detecting tracheal rings) had been implemented in order to compare their performance. Keywords: Bronchoscopy, tracheal ring, segmentation
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Debora Gil, Jordi Gonzalez, & Gemma Sanchez (Eds.). (2007). Computer Vision: Advances in Research and Development. 2. Bellaterra (Spain): UAB. |
Patricia Marquez. (2015). A Confidence Framework for the Assessment of Optical Flow Performance (Debora Gil, & Aura Hernandez, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Optical Flow (OF) is the input of a wide range of decision support systems such as car driver assistance, UAV guiding or medical diagnose. In these real situations, the absence of ground truth forces to assess OF quality using quantities computed from either sequences or the computed optical flow itself. These quantities are generally known as Confidence Measures, CM. Even if we have a proper confidence measure we still need a way to evaluate its ability to discard pixels with an OF prone to have a large error. Current approaches only provide a descriptive evaluation of the CM performance but such approaches are not capable to fairly compare different confidence measures and optical flow algorithms. Thus, it is of prime importance to define a framework and a general road map for the evaluation of optical flow performance.
This thesis provides a framework able to decide which pairs “ optical flow – confidence measure” (OF-CM) are best suited for optical flow error bounding given a confidence level determined by a decision support system. To design this framework we cover the following points: Descriptive scores. As a first step, we summarize and analyze the sources of inaccuracies in the output of optical flow algorithms. Second, we present several descriptive plots that visually assess CM capabilities for OF error bounding. In addition to the descriptive plots, given a plot representing OF-CM capabilities to bound the error, we provide a numeric score that categorizes the plot according to its decreasing profile, that is, a score assessing CM performance. Statistical framework. We provide a comparison framework that assesses the best suited OF-CM pair for error bounding that uses a two stage cascade process. First of all we assess the predictive value of the confidence measures by means of a descriptive plot. Then, for a sample of descriptive plots computed over training frames, we obtain a generic curve that will be used for sequences with no ground truth. As a second step, we evaluate the obtained general curve and its capabilities to really reflect the predictive value of a confidence measure using the variability across train frames by means of ANOVA. The presented framework has shown its potential in the application on clinical decision support systems. In particular, we have analyzed the impact of the different image artifacts such as noise and decay to the output of optical flow in a cardiac diagnose system and we have improved the navigation inside the bronchial tree on bronchoscopy. |
Antonio Esteban Lansaque. (2019). An Endoscopic Navigation System for Lung Cancer Biopsy (Debora Gil, & Carles Sanchez, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Lung cancer is one of the most diagnosed cancers among men and women. Actually,
lung cancer accounts for 13% of the total cases with a 5-year global survival rate in patients. Although Early detection increases survival rate from 38% to 67%, accurate diagnosis remains a challenge. Pathological confirmation requires extracting a sample of the lesion tissue for its biopsy. The preferred procedure for tissue biopsy is called bronchoscopy. A bronchoscopy is an endoscopic technique for the internal exploration of airways which facilitates the performance of minimal invasive interventions with low risk for the patient. Recent advances in bronchoscopic devices have increased their use for minimal invasive diagnostic and intervention procedures, like lung cancer biopsy sampling. Despite the improvement in bronchoscopic device quality, there is a lack of intelligent computational systems for supporting in-vivo clinical decision during examinations. Existing technologies fail to accurately reach the lesion due to several aspects at intervention off-line planning and poor intra-operative guidance at exploration time. Existing guiding systems radiate patients and clinical staff,might be expensive and achieve a suboptimlal 70% of yield boost. Diagnostic yield could be improved reducing radiation and costs by developing intra-operative support systems able to guide the bronchoscopist to the lesion during the intervention. The goal of this PhD thesis is to develop an image-based navigation systemfor intra-operative guidance of bronchoscopists to a target lesion across a path previously planned on a CT-scan. We propose a 3D navigation system which uses the anatomy of video bronchoscopy frames to locate the bronchoscope within the airways. Once the bronchoscope is located, our navigation system is able to indicate the bifurcation which needs to be followed to reach the lesion. In order to facilitate an off-line validation as realistic as possible, we also present a method for augmenting simulated virtual bronchoscopies with the appearance of intra-operative videos. Experiments performed on augmented and intra-operative videos, prove that our algorithm can be speeded up for an on-line implementation in the operating room. |
Ferran Poveda. (2013). Computer Graphics and Vision Techniques for the Study of the Muscular Fiber Architecture of the Myocardium (Debora Gil, & Enric Marti, Eds.). Ph.D. thesis, , . |
David Roche. (2015). A Statistical Framework for Terminating Evolutionary Algorithms at their Steady State (Debora Gil, & Jesus Giraldo, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: As any iterative technique, it is a necessary condition a stop criterion for terminating Evolutionary Algorithms (EA). In the case of optimization methods, the algorithm should stop at the time it has reached a steady state so it can not improve results anymore. Assessing the reliability of termination conditions for EAs is of prime importance. A wrong or weak stop criterion can negatively aect both the computational eort and the nal result.
In this Thesis, we introduce a statistical framework for assessing whether a termination condition is able to stop EA at its steady state. In one hand a numeric approximation to steady states to detect the point in which EA population has lost its diversity has been presented for EA termination. This approximation has been applied to dierent EA paradigms based on diversity and a selection of functions covering the properties most relevant for EA convergence. Experiments show that our condition works regardless of the search space dimension and function landscape and Dierential Evolution (DE) arises as the best paradigm. On the other hand, we use a regression model in order to determine the requirements ensuring that a measure derived from EA evolving population is related to the distance to the optimum in xspace. Our theoretical framework is analyzed across several benchmark test functions and two standard termination criteria based on function improvement in f-space and EA population x-space distribution for the DE paradigm. Results validate our statistical framework as a powerful tool for determining the capability of a measure for terminating EA and select the x-space distribution as the best-suited for accurately stopping DE in real-world applications. |
Sergio Vera. (2015). Anatomic Registration based on Medial Axis Parametrizations (Debora Gil, & Miguel Angel Gonzalez Ballester, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Image registration has been for many years the gold standard method to bring two images into correspondence. It has been used extensively in the eld of medical imaging in order to put images of dierent patients into a common overlapping spatial position. However, medical image registration is a slow, iterative optimization process, where many variables and prone to fall into the pit traps local minima.
A coordinate system parameterizing the interior of organs is a powerful tool for a systematic localization of injured tissue. If the same coordinate values are assigned to specic anatomical sites, parameterizations ensure integration of data across different medical image modalities. Harmonic mappings have been used to produce parametric meshes over the surface of anatomical shapes, given their ability to set values at specic locations through boundary conditions. However, most of the existing implementations in medical imaging restrict to either anatomical surfaces, or the depth coordinate with boundary conditions is given at discrete sites of limited geometric diversity. The medial surface of the shape can be used to provide a continuous basis for the denition of a depth coordinate. However, given that dierent methods for generation of medial surfaces generate dierent manifolds, not all of them are equally suited to be the basis of radial coordinate for a parameterization. It would be desirable that the medial surface will be smooth, and robust to surface shape noise, with low number of spurious branches or surfaces. In this thesis we present methods for computation of smooth medial manifolds and apply them to the generation of for anatomical volumetric parameterization that extends current harmonic parameterizations to the interior anatomy using information provided by the volume medial surface. This reference system sets a solid base for creating anatomical models of the anatomical shapes, and allows comparing several patients in a common framework of reference. |
C. Alejandro Parraga. (2014). Color Vision, Computational Methods for. In Dieter Jaeger, & Ranu Jung (Eds.), Encyclopedia of Computational Neuroscience (pp. 1–11). Springer-Verlag Berlin Heidelberg.
Abstract: The study of color vision has been aided by a whole battery of computational methods that attempt to describe the mechanisms that lead to our perception of colors in terms of the information-processing properties of the visual system. Their scope is highly interdisciplinary, linking apparently dissimilar disciplines such as mathematics, physics, computer science, neuroscience, cognitive science, and psychology. Since the sensation of color is a feature of our brains, computational approaches usually include biological features of neural systems in their descriptions, from retinal light-receptor interaction to subcortical color opponency, cortical signal decoding, and color categorization. They produce hypotheses that are usually tested by behavioral or psychophysical experiments.
Keywords: Color computational vision; Computational neuroscience of color
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Lluis Gomez. (2016). Exploiting Similarity Hierarchies for Multi-script Scene Text Understanding (Dimosthenis Karatzas, Ed.). Ph.D. thesis, , .
Abstract: This thesis addresses the problem of automatic scene text understanding in unconstrained conditions. In particular, we tackle the tasks of multi-language and arbitrary-oriented text detection, tracking, and script identification in natural scenes.
For this we have developed a set of generic methods that build on top of the basic observation that text has always certain key visual and structural characteristics that are independent of the language or script in which it is written. Text instances in any language or script are always formed as groups of similar atomic parts, being them either individual characters, small stroke parts, or even whole words in the case of cursive text. This holistic (sumof-parts) and recursive perspective has lead us to explore different variants of the “segmentation and grouping” paradigm of computer vision. Scene text detection methodologies are usually based in classification of individual regions or patches, using a priory knowledge for a given script or language. Human perception of text, on the other hand, is based on perceptual organization through which text emerges as a perceptually significant group of atomic objects. In this thesis, we argue that the text detection problem must be posed as the detection of meaningful groups of regions. We address the problem of text detection in natural scenes from a hierarchical perspective, making explicit use of the recursive nature of text, aiming directly to the detection of region groupings corresponding to text within a hierarchy produced by an agglomerative similarity clustering process over individual regions. We propose an optimal way to construct such an hierarchy introducing a feature space designed to produce text group hypothese with high recall and a novel stopping rule combining a discriminative classifier and a probabilistic measure of group meaningfulness based in perceptual organization. Within this generic framework, we design a text-specific object proposals algorithm that, contrary to existing generic object proposals methods, aims directly to the detection of text regions groupings. For this, we abandon the rigid definition of “what is text” of traditional specialized text detectors, and move towards more fuzzy perspective of grouping-based object proposals methods. Then, we present a hybrid algorithm for detection and tracking of scene text where the notion of region groupings plays also a central role. By leveraging the structural arrangement of text group components between consecutive frames we can improve the overall tracking performance of the system. Finally, since our generic detection framework is inherently designed for multi-language environments, we focus on the problem of script identification in order to build a multi-language end-toend reading system. Facing this problem with state of the art CNN classifiers is not straightforward, as they fail to address a key characteristic of scene text instances: their extremely variable aspect ratio. Instead of resizing input images to a fixed size as in the typical use of holistic CNN classifiers, we propose a patch-based classification framework in order to preserve discriminative parts of the image that are characteristic of its class. We describe a novel method based on the use of ensembles of conjoined networks to jointly learn discriminative stroke-parts representations and their relative importance in a patch-based classification scheme. |
Dena Bazazian. (2018). Fully Convolutional Networks for Text Understanding in Scene Images (Dimosthenis Karatzas, & Andrew Bagdanov, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Text understanding in scene images has gained plenty of attention in the computer vision community and it is an important task in many applications as text carries semantically rich information about scene content and context. For instance, reading text in a scene can be applied to autonomous driving, scene understanding or assisting visually impaired people. The general aim of scene text understanding is to localize and recognize text in scene images. Text regions are first localized in the original image by a trained detector model and afterwards fed into a recognition module. The tasks of localization and recognition are highly correlated since an inaccurate localization can affect the recognition task.
The main purpose of this thesis is to devise efficient methods for scene text understanding. We investigate how the latest results on deep learning can advance text understanding pipelines. Recently, Fully Convolutional Networks (FCNs) and derived methods have achieved a significant performance on semantic segmentation and pixel level classification tasks. Therefore, we took benefit of the strengths of FCN approaches in order to detect text in natural scenes. In this thesis we have focused on two challenging tasks of scene text understanding which are Text Detection and Word Spotting. For the task of text detection, we have proposed an efficient text proposal technique in scene images. We have considered the Text Proposals method as the baseline which is an approach to reduce the search space of possible text regions in an image. In order to improve the Text Proposals method we combined it with Fully Convolutional Networks to efficiently reduce the number of proposals while maintaining the same level of accuracy and thus gaining a significant speed up. Our experiments demonstrate that this text proposal approach yields significantly higher recall rates than the line based text localization techniques, while also producing better-quality localization. We have also applied this technique on compressed images such as videos from wearable egocentric cameras. For the task of word spotting, we have introduced a novel mid-level word representation method. We have proposed a technique to create and exploit an intermediate representation of images based on text attributes which roughly correspond to character probability maps. Our representation extends the concept of Pyramidal Histogram Of Characters (PHOC) by exploiting Fully Convolutional Networks to derive a pixel-wise mapping of the character distribution within candidate word regions. We call this representation the Soft-PHOC. Furthermore, we show how to use Soft-PHOC descriptors for word spotting tasks through an efficient text line proposal algorithm. To evaluate the detected text, we propose a novel line based evaluation along with the classic bounding box based approach. We test our method on incidental scene text images which comprises real-life scenarios such as urban scenes. The importance of incidental scene text images is due to the complexity of backgrounds, perspective, variety of script and language, short text and little linguistic context. All of these factors together makes the incidental scene text images challenging. |
Antonio Clavelli. (2014). A computational model of eye guidance, searching for text in real scene images (Dimosthenis Karatzas, Giuseppe Boccignone, & Josep Llados, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Searching for text objects in real scene images is an open problem and a very active computer vision research area. A large number of methods have been proposed tackling the text search as extension of the ones from the document analysis field or inspired by general purpose object detection methods. However the general problem of object search in real scene images remains an extremely challenging problem due to the huge variability in object appearance. This thesis builds on top of the most recent findings in the visual attention literature presenting a novel computational model of eye guidance aiming to better describe text object search in real scene images.
First are presented the relevant state-of-the-art results from the visual attention literature regarding eye movements and visual search. Relevant models of attention are discussed and integrated with recent observations on the role of top-down constraints and the emerging need for a layered model of attention in which saliency is not the only factor guiding attention. Visual attention is then explained by the interaction of several modulating factors, such as objects, value, plans and saliency. Then we introduce our probabilistic formulation of attention deployment in real scene. The model is based on the rationale that oculomotor control depends on two interacting but distinct processes: an attentional process that assigns value to the sources of information and motor process that flexibly links information with action. In such framework, the choice of where to look next is task-dependent and oriented to classes of objects embedded within pictures of complex scenes. The dependence on task is taken into account by exploiting the value and the reward of gazing at certain image patches or proto-objects that provide a sparse representation of the scene objects. In the experimental section the model is tested in laboratory condition, comparing model simulations with data from eye tracking experiments. The comparison is qualitative in terms of observable scan paths and quantitative in terms of statistical similarity of gaze shift amplitude. Experiments are performed using eye tracking data from both a publicly available dataset of face and text and from newly performed eye-tracking experiments on a dataset of street view pictures containing text. The last part of this thesis is dedicated to study the extent to which the proposed model can account for human eye movements in a low constrained setting. We used a mobile eye tracking device and an ad-hoc developed methodology to compare model simulated eye data with the human eye data from mobile eye tracking recordings. Such setting allow to test the model in an incomplete visual information condition, reproducing a close to real-life search task. |
Ali Furkan Biten. (2022). A Bitter-Sweet Symphony on Vision and Language: Bias and World Knowledge (Dimosthenis Karatzas, & Lluis Gomez, Eds.). Ph.D. thesis, IMPRIMA, .
Abstract: Vision and Language are broadly regarded as cornerstones of intelligence. Even though language and vision have different aims – language having the purpose of communication, transmission of information and vision having the purpose of constructing mental representations around us to navigate and interact with objects – they cooperate and depend on one another in many tasks we perform effortlessly. This reliance is actively being studied in various Computer Vision tasks, e.g. image captioning, visual question answering, image-sentence retrieval, phrase grounding, just to name a few. All of these tasks share the inherent difficulty of the aligning the two modalities, while being robust to language
priors and various biases existing in the datasets. One of the ultimate goal for vision and language research is to be able to inject world knowledge while getting rid of the biases that come with the datasets. In this thesis, we mainly focus on two vision and language tasks, namely Image Captioning and Scene-Text Visual Question Answering (STVQA). In both domains, we start by defining a new task that requires the utilization of world knowledge and in both tasks, we find that the models commonly employed are prone to biases that exist in the data. Concretely, we introduce new tasks and discover several problems that impede performance at each level and provide remedies or possible solutions in each chapter: i) We define a new task to move beyond Image Captioning to Image Interpretation that can utilize Named Entities in the form of world knowledge. ii) We study the object hallucination problem in classic Image Captioning systems and develop an architecture-agnostic solution. iii) We define a sub-task of Visual Question Answering that requires reading the text in the image (STVQA), where we highlight the limitations of current models. iv) We propose an architecture for the STVQA task that can point to the answer in the image and show how to combine it with classic VQA models. v) We show how far language can get us in STVQA and discover yet another bias which causes the models to disregard the image while doing Visual Question Answering. |