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Jose Seabra, Francesco Ciompi, Oriol Pujol, J. Mauri, Petia Radeva, & Joao Sanchez. (2011). Rayleigh Mixture Model for Plaque Characterization in Intravascular Ultrasound. TBME - IEEE Transactions on Biomedical Engineering, 58(5), 1314–1324.
Abstract: Vulnerable plaques are the major cause of carotid and coronary vascular problems, such as heart attack or stroke. A correct modeling of plaque echomorphology and composition can help the identification of such lesions. The Rayleigh distribution is widely used to describe (nearly) homogeneous areas in ultrasound images. Since plaques may contain tissues with heterogeneous regions, more complex distributions depending on multiple parameters are usually needed, such as Rice, K or Nakagami distributions. In such cases, the problem formulation becomes more complex, and the optimization procedure to estimate the plaque echomorphology is more difficult. Here, we propose to model the tissue echomorphology by means of a mixture of Rayleigh distributions, known as the Rayleigh mixture model (RMM). The problem formulation is still simple, but its ability to describe complex textural patterns is very powerful. In this paper, we present a method for the automatic estimation of the RMM mixture parameters by means of the expectation maximization algorithm, which aims at characterizing tissue echomorphology in ultrasound (US). The performance of the proposed model is evaluated with a database of in vitro intravascular US cases. We show that the mixture coefficients and Rayleigh parameters explicitly derived from the mixture model are able to accurately describe different plaque types and to significantly improve the characterization performance of an already existing methodology.
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J.R. Serra, S. Casadei, & J.B. Subirana. (1995). Non-Cartesian Networks for Middle Level Vision..
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Patricia Suarez, Dario Carpio, & Angel Sappa. (2021). Non-homogeneous Haze Removal Through a Multiple Attention Module Architecture. In 16th International Symposium on Visual Computing (Vol. 13018, 178–190). LNCS.
Abstract: This paper presents a novel attention based architecture to remove non-homogeneous haze. The proposed model is focused on obtaining the most representative characteristics of the image, at each learning cycle, by means of adaptive attention modules coupled with a residual learning convolutional network. The latter is based on the Res2Net model. The proposed architecture is trained with just a few set of images. Its performance is evaluated on a public benchmark—images from the non-homogeneous haze NTIRE 2021 challenge—and compared with state of the art approaches reaching the best result.
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Patricia Suarez, Dario Carpio, Angel Sappa, & Henry Velesaca. (2022). Transformer based Image Dehazing. In 16th IEEE International Conference on Signal Image Technology & Internet Based System.
Abstract: This paper presents a novel approach to remove non homogeneous haze from real images. The proposed method consists mainly of image feature extraction, haze removal, and image reconstruction. To accomplish this challenging task, we propose an architecture based on transformers, which have been recently introduced and have shown great potential in different computer vision tasks. Our model is based on the SwinIR an image restoration architecture based on a transformer, but by modifying the deep feature extraction module, the depth level of the model, and by applying a combined loss function that improves styling and adapts the model for the non-homogeneous haze removal present in images. The obtained results prove to be superior to those obtained by state-of-the-art models.
Keywords: atmospheric light; brightness component; computational cost; dehazing quality; haze-free image
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Patricia Suarez, Dario Carpio, & Angel Sappa. (2023). A Deep Learning Based Approach for Synthesizing Realistic Depth Maps. In 22nd International Conference on Image Analysis and Processing (Vol. 14234, 369–380). LNCS.
Abstract: This paper presents a novel cycle generative adversarial network (CycleGAN) architecture for synthesizing high-quality depth maps from a given monocular image. The proposed architecture uses multiple loss functions, including cycle consistency, contrastive, identity, and least square losses, to enable the generation of realistic and high-fidelity depth maps. The proposed approach addresses this challenge by synthesizing depth maps from RGB images without requiring paired training data. Comparisons with several state-of-the-art approaches are provided showing the proposed approach overcome other approaches both in terms of quantitative metrics and visual quality.
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Patricia Suarez, Dario Carpio, & Angel Sappa. (2023). Depth Map Estimation from a Single 2D Image. In 17th International Conference on Signal-Image Technology & Internet-Based Systems (pp. 347–353).
Abstract: This paper presents an innovative architecture based on a Cycle Generative Adversarial Network (CycleGAN) for the synthesis of high-quality depth maps from monocular images. The proposed architecture leverages a diverse set of loss functions, including cycle consistency, contrastive, identity, and least square losses, to facilitate the generation of depth maps that exhibit realism and high fidelity. A notable feature of the approach is its ability to synthesize depth maps from grayscale images without the need for paired training data. Extensive comparisons with different state-of-the-art methods show the superiority of the proposed approach in both quantitative metrics and visual quality. This work addresses the challenge of depth map synthesis and offers significant advancements in the field.
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Patricia Suarez, Dario Carpio, & Angel Sappa. (2023). Boosting Guided Super-Resolution Performance with Synthesized Images. In 17th International Conference on Signal-Image Technology & Internet-Based Systems (pp. 189–195).
Abstract: Guided image processing techniques are widely used for extracting information from a guiding image to aid in the processing of the guided one. These images may be sourced from different modalities, such as 2D and 3D, or different spectral bands, like visible and infrared. In the case of guided cross-spectral super-resolution, features from the two modal images are extracted and efficiently merged to migrate guidance information from one image, usually high-resolution (HR), toward the guided one, usually low-resolution (LR). Different approaches have been recently proposed focusing on the development of architectures for feature extraction and merging in the cross-spectral domains, but none of them care about the different nature of the given images. This paper focuses on the specific problem of guided thermal image super-resolution, where an LR thermal image is enhanced by an HR visible spectrum image. To improve existing guided super-resolution techniques, a novel scheme is proposed that maps the original guiding information to a thermal image-like representation that is similar to the output. Experimental results evaluating five different approaches demonstrate that the best results are achieved when the guiding and guided images share the same domain.
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Patricia Suarez, Dario Carpio, & Angel Sappa. (2024). Enhancement of guided thermal image super-resolution approaches. NEUCOM - Neurocomputing, 573(127197), 1–17.
Abstract: Guided image processing techniques are widely used to extract meaningful information from a guiding image and facilitate the enhancement of the guided one. This paper specifically addresses the challenge of guided thermal image super-resolution, where a low-resolution thermal image is enhanced using a high-resolution visible spectrum image. We propose a new strategy that enhances outcomes from current guided super-resolution methods. This is achieved by transforming the initial guiding data into a representation resembling a thermal-like image, which is more closely in sync with the intended output. Experimental results with upscale factors of 8 and 16, demonstrate the outstanding performance of our approach in guided thermal image super-resolution obtained by mapping the original guiding information to a thermal-like image representation.
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Damian Sojka, Sebastian Cygert, Bartlomiej Twardowski, & Tomasz Trzcinski. (2023). AR-TTA: A Simple Method for Real-World Continual Test-Time Adaptation. In Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV) Workshops (pp. 3491–3495).
Abstract: Test-time adaptation is a promising research direction that allows the source model to adapt itself to changes in data distribution without any supervision. Yet, current methods are usually evaluated on benchmarks that are only a simplification of real-world scenarios. Hence, we propose to validate test-time adaptation methods using the recently introduced datasets for autonomous driving, namely CLAD-C and SHIFT. We observe that current test-time adaptation methods struggle to effectively handle varying degrees of domain shift, often resulting in degraded performance that falls below that of the source model. We noticed that the root of the problem lies in the inability to preserve the knowledge of the source model and adapt to dynamically changing, temporally correlated data streams. Therefore, we enhance well-established self-training framework by incorporating a small memory buffer to increase model stability and at the same time perform dynamic adaptation based on the intensity of domain shift. The proposed method, named AR-TTA, outperforms existing approaches on both synthetic and more real-world benchmarks and shows robustness across a variety of TTA scenarios.
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Albin Soutif, Antonio Carta, & Joost Van de Weijer. (2023). Improving Online Continual Learning Performance and Stability with Temporal Ensembles. In 2nd Conference on Lifelong Learning Agents.
Abstract: Neural networks are very effective when trained on large datasets for a large number of iterations. However, when they are trained on non-stationary streams of data and in an online fashion, their performance is reduced (1) by the online setup, which limits the availability of data, (2) due to catastrophic forgetting because of the non-stationary nature of the data. Furthermore, several recent works (Caccia et al., 2022; Lange et al., 2023) arXiv:2205.13452 showed that replay methods used in continual learning suffer from the stability gap, encountered when evaluating the model continually (rather than only on task boundaries). In this article, we study the effect of model ensembling as a way to improve performance and stability in online continual learning. We notice that naively ensembling models coming from a variety of training tasks increases the performance in online continual learning considerably. Starting from this observation, and drawing inspirations from semi-supervised learning ensembling methods, we use a lightweight temporal ensemble that computes the exponential moving average of the weights (EMA) at test time, and show that it can drastically increase the performance and stability when used in combination with several methods from the literature.
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Frederic Sampedro, Anna Domenech, & Sergio Escalera. (2014). Static and dynamic computational cancer spread quantification in whole body FDG-PET/CT scans. JMIHI - Journal of Medical Imaging and Health Informatics, 4(6), 825–831.
Abstract: In this work we address the computational cancer spread quantification scenario in whole body FDG-PET/CT scans. At the static level, this setting can be modeled as a clustering problem on the set of 3D connected components of the whole body PET tumoral segmentation mask carried out by nuclear medicine physicians. At the dynamic level, and ad-hoc algorithm is proposed in order to quantify the cancer spread time evolution which, when combined with other existing indicators, gives rise to the metabolic tumor volume-aggressiveness-spread time evolution chart, a novel tool that we claim that would prove useful in nuclear medicine and oncological clinical or research scenarios. Good performance results of the proposed methodologies both at the clinical and technological level are shown using a dataset of 48 segmented whole body FDG-PET/CT scans.
Keywords: CANCER SPREAD; COMPUTER AIDED DIAGNOSIS; MEDICAL IMAGING; TUMOR QUANTIFICATION
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Frederic Sampedro, Anna Domenech, Sergio Escalera, & Ignasi Carrio. (2015). Deriving global quantitative tumor response parameters from 18F-FDG PET-CT scans in patients with non-Hodgkins lymphoma. NMC - Nuclear Medicine Communications, 36(4), 328–333.
Abstract: OBJECTIVES:
The aim of the study was to address the need for quantifying the global cancer time evolution magnitude from a pair of time-consecutive positron emission tomography-computed tomography (PET-CT) scans. In particular, we focus on the computation of indicators using image-processing techniques that seek to model non-Hodgkin's lymphoma (NHL) progression or response severity.
MATERIALS AND METHODS:
A total of 89 pairs of time-consecutive PET-CT scans from NHL patients were stored in a nuclear medicine station for subsequent analysis. These were classified by a consensus of nuclear medicine physicians into progressions, partial responses, mixed responses, complete responses, and relapses. The cases of each group were ordered by magnitude following visual analysis. Thereafter, a set of quantitative indicators designed to model the cancer evolution magnitude within each group were computed using semiautomatic and automatic image-processing techniques. Performance evaluation of the proposed indicators was measured by a correlation analysis with the expert-based visual analysis.
RESULTS:
The set of proposed indicators achieved Pearson's correlation results in each group with respect to the expert-based visual analysis: 80.2% in progressions, 77.1% in partial response, 68.3% in mixed response, 88.5% in complete response, and 100% in relapse. In the progression and mixed response groups, the proposed indicators outperformed the common indicators used in clinical practice [changes in metabolic tumor volume, mean, maximum, peak standardized uptake value (SUV mean, SUV max, SUV peak), and total lesion glycolysis] by more than 40%.
CONCLUSION:
Computing global indicators of NHL response using PET-CT imaging techniques offers a strong correlation with the associated expert-based visual analysis, motivating the future incorporation of such quantitative and highly observer-independent indicators in oncological decision making or treatment response evaluation scenarios.
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Frederic Sampedro, Anna Domenech, Sergio Escalera, & Ignasi Carrio. (2017). Computing quantitative indicators of structural renal damage in pediatric DMSA scans. REMNIM - Revista Española de Medicina Nuclear e Imagen Molecular, 36(2), 72–77.
Abstract: OBJECTIVES:
The proposal and implementation of a computational framework for the quantification of structural renal damage from 99mTc-dimercaptosuccinic acid (DMSA) scans. The aim of this work is to propose, implement, and validate a computational framework for the quantification of structural renal damage from DMSA scans and in an observer-independent manner.
MATERIALS AND METHODS:
From a set of 16 pediatric DMSA-positive scans and 16 matched controls and using both expert-guided and automatic approaches, a set of image-derived quantitative indicators was computed based on the relative size, intensity and histogram distribution of the lesion. A correlation analysis was conducted in order to investigate the association of these indicators with other clinical data of interest in this scenario, including C-reactive protein (CRP), white cell count, vesicoureteral reflux, fever, relative perfusion, and the presence of renal sequelae in a 6-month follow-up DMSA scan.
RESULTS:
A fully automatic lesion detection and segmentation system was able to successfully classify DMSA-positive from negative scans (AUC=0.92, sensitivity=81% and specificity=94%). The image-computed relative size of the lesion correlated with the presence of fever and CRP levels (p<0.05), and a measurement derived from the distribution histogram of the lesion obtained significant performance results in the detection of permanent renal damage (AUC=0.86, sensitivity=100% and specificity=75%).
CONCLUSIONS:
The proposal and implementation of a computational framework for the quantification of structural renal damage from DMSA scans showed a promising potential to complement visual diagnosis and non-imaging indicators.
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Palaiahnakote Shivakumara, Anjan Dutta, Trung Quy Phan, Chew Lim Tan, & Umapada Pal. (2011). A Novel Mutual Nearest Neighbor based Symmetry for Text Frame Classification in Video. PR - Pattern Recognition, 44(8), 1671–1683.
Abstract: In the field of multimedia retrieval in video, text frame classification is essential for text detection, event detection, event boundary detection, etc. We propose a new text frame classification method that introduces a combination of wavelet and median moment with k-means clustering to select probable text blocks among 16 equally sized blocks of a video frame. The same feature combination is used with a new Max–Min clustering at the pixel level to choose probable dominant text pixels in the selected probable text blocks. For the probable text pixels, a so-called mutual nearest neighbor based symmetry is explored with a four-quadrant formation centered at the centroid of the probable dominant text pixels to know whether a block is a true text block or not. If a frame produces at least one true text block then it is considered as a text frame otherwise it is a non-text frame. Experimental results on different text and non-text datasets including two public datasets and our own created data show that the proposed method gives promising results in terms of recall and precision at the block and frame levels. Further, we also show how existing text detection methods tend to misclassify non-text frames as text frames in term of recall and precision at both the block and frame levels.
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Santiago Segui, Michal Drozdzal, Guillem Pascual, Petia Radeva, Carolina Malagelada, Fernando Azpiroz, et al. (2016). Generic Feature Learning for Wireless Capsule Endoscopy Analysis. CBM - Computers in Biology and Medicine, 79, 163–172.
Abstract: The interpretation and analysis of wireless capsule endoscopy (WCE) recordings is a complex task which requires sophisticated computer aided decision (CAD) systems to help physicians with video screening and, finally, with the diagnosis. Most CAD systems used in capsule endoscopy share a common system design, but use very different image and video representations. As a result, each time a new clinical application of WCE appears, a new CAD system has to be designed from the scratch. This makes the design of new CAD systems very time consuming. Therefore, in this paper we introduce a system for small intestine motility characterization, based on Deep Convolutional Neural Networks, which circumvents the laborious step of designing specific features for individual motility events. Experimental results show the superiority of the learned features over alternative classifiers constructed using state-of-the-art handcrafted features. In particular, it reaches a mean classification accuracy of 96% for six intestinal motility events, outperforming the other classifiers by a large margin (a 14% relative performance increase).
Keywords: Wireless capsule endoscopy; Deep learning; Feature learning; Motility analysis
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