Abstract: This work addresses the detection of Helicobacter pylori a bacterium classified since 1994 as class 1 carcinogen to humans. By its highest specificity and sensitivity, the preferred diagnosis technique is the analysis of histological images with immunohistochemical staining, a process in which certain stained antibodies bind to antigens of the biological element of interest. This analysis is a time demanding task, which is currently done by an expert pathologist that visually inspects the digitized samples.
We propose to use autoencoders to learn latent patterns of healthy tissue and detect H. pylori as an anomaly in image staining. Unlike existing classification approaches, an autoencoder is able to learn patterns in an unsupervised manner (without the need of image annotations) with high performance. In particular, our model has an overall 91% of accuracy with 86\% sensitivity, 96% specificity and 0.97 AUC in the detection of H. pylori.

Abstract: The recognition of abnormal behaviors in video sequences has raised as a hot topic in video understanding research. Particularly, an important challenge resides on automatically detecting abnormality. However, there is no convention about the types of anomalies that training data should derive. In surveillance, these are typically detected when new observations differ substantially from observed, previously learned behavior models, which represent normality. This paper focuses on properly defining anomalies within trajectory analysis: we propose a hierarchical representation conformed by Soft, Intermediate, and Hard Anomaly, which are identified from the extent and nature of deviation from learned models. Towards this end, a novel Gaussian Mixture Model representation of learned route patterns creates a probabilistic map of the image plane, which is applied to detect and classify anomalies in real-time. Our method overcomes limitations of similar existing approaches, and performs correctly even when the tracking is affected by different sources of noise. The reliability of our approach is demonstrated experimentally.

Abstract: The comprehension of animal behavior, especially human behavior, is one of the most ancient and studied problems since the beginning of civilization. The big list of factors that interact to determine a person action require the collaboration of different disciplines, such as psichology, biology, or sociology. In the last years the analysis of human behavior has received great attention also from the computer vision community, given the latest advances in the acquisition of human motion data from image sequences.
Despite the increasing availability of that data, there still exists a gap towards obtaining a conceptual representation of the obtained observations. Human behavior analysis is based on a qualitative interpretation of the results, and therefore the assignment of concepts to quantitative data is linked to a certain ambiguity.
This Thesis tackles the problem of obtaining a proper representation of human behavior in the contexts of computer vision and animation. On the one hand, a good behavior model should permit the recognition and explanation the observed activity in image sequences. On the other hand, such a model must allow the generation of new synthetic instances, which model the behavior of virtual agents.
First, we propose methods to automatically learn the models from observations. Given a set of quantitative results output by a vision system, a normal behavior model is learnt. This results provides a tool to determine the normality or abnormality of future observations. However, machine learning methods are unable to provide a richer description of the observations. We confront this problem by means of a new method that incorporates prior knowledge about the enviornment and about the expected behaviors. This framework, formed by the reasoning engine FMTL and the modeling tool SGT allows the generation of conceptual descriptions of activity in new image sequences. Finally, we demonstrate the suitability of the proposed framework to simulate behavior of virtual agents, which are introduced into real image sequences and interact with observed real agents, thereby easing the generation of augmented reality sequences.
The set of approaches presented in this Thesis has a growing set of potential applications. The analysis and description of behavior in image sequences has its principal application in the domain of smart video--surveillance, in order to detect suspicious or dangerous behaviors. Other applications include automatic sport commentaries, elderly monitoring, road traffic analysis, and the development of semantic video search engines. Alternatively, behavioral virtual agents allow to simulate accurate real situations, such as fires or crowds. Moreover, the inclusion of virtual agents into real image sequences has been widely deployed in the games and cinema industries.

Abstract: This article presents an efficient approach to classify a set of corn kernels in contact, which may contain good, or defective kernels along with impurities. The proposed approach consists of two stages, the first one is a next-generation segmentation network, trained by using a set of synthesized images that is applied to divide the given image into a set of individual instances. An ad-hoc lightweight CNN architecture is then proposed to classify each instance into one of three categories (ie good, defective, and impurities). The segmentation network is trained using a strategy that avoids the time-consuming and human-error-prone task of manual data annotation. Regarding the classification stage, the proposed ad-hoc network is designed with only a few sets of layers to result in a lightweight architecture capable of being used in integrated solutions. Experimental results and comparisons with previous approaches showing both the improvement in accuracy and the reduction in time are provided. Finally, the segmentation and classification approach proposed can be easily adapted for use with other cereal types.

Abstract: This paper presents a novel attention based architecture to remove non-homogeneous haze. The proposed model is focused on obtaining the most representative characteristics of the image, at each learning cycle, by means of adaptive attention modules coupled with a residual learning convolutional network. The latter is based on the Res2Net model. The proposed architecture is trained with just a few set of images. Its performance is evaluated on a public benchmark—images from the non-homogeneous haze NTIRE 2021 challenge—and compared with state of the art approaches reaching the best result.