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Martin Menchon; Estefania Talavera; Jose M. Massa; Petia Radeva |
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Title |
Behavioural Pattern Discovery from Collections of Egocentric Photo-Streams |
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Conference Article |
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2020 |
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ECCV Workshops |
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12538 |
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469-484 |
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The automatic discovery of behaviour is of high importance when aiming to assess and improve the quality of life of people. Egocentric images offer a rich and objective description of the daily life of the camera wearer. This work proposes a new method to identify a person’s patterns of behaviour from collected egocentric photo-streams. Our model characterizes time-frames based on the context (place, activities and environment objects) that define the images composition. Based on the similarity among the time-frames that describe the collected days for a user, we propose a new unsupervised greedy method to discover the behavioural pattern set based on a novel semantic clustering approach. Moreover, we present a new score metric to evaluate the performance of the proposed algorithm. We validate our method on 104 days and more than 100k images extracted from 7 users. Results show that behavioural patterns can be discovered to characterize the routine of individuals and consequently their lifestyle. |
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Virtual; August 2020 |
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ECCVW |
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MILAB; no proj |
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Admin @ si @ MTM2020 |
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3528 |
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Martha Mackay; Fernando Alonso; Pere Salamero; Xavier Baro; Jordi Gonzalez; Sergio Escalera |
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Care and caring: future proofing the new demographics |
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2015 |
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6th International Carers Conference |
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With an ageing population, the issue of care provision is becoming increasingly important. The simple aspiration of the majority of older people is to live safely and well at home. Housing will be part of health & care integration in the following years and decades. A higher proportion of people will have to rely on informal care through family, friends, neighbors and others who
provide care to an older person in need of assistance (around 80% of care across the EU). They do not usually have a formal status and are usually unpaid. We need to ensure that all disabled or chronically ill people can get the help they need without overburdening their families.
The physical and emotional stress of carers is one of the dangers that this dependency can bring. To prevent carers burnout it is necessary to provide new solutions that are affordable and user friendly for the families and caregivers. |
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Gothenburg; Sweden; September 2015 |
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CARERS |
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HuPBA; ISE; 600.078;MV |
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Admin @ si @ MAS2015b |
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2678 |
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Marta Teres; Eduard Vazquez |
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Museums, spaces and museographical resources. Current state and proposals for a multidisciplinary framework to open new perspectives |
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2010 |
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Proceedings of The CREATE 2010 Conference |
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319–323 |
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Two of the main aims of a museum are to communicate its heritage and to make enjoy its visitors. This communication can be done through the pieces itself and the museographical resources but also through the building, the interior design, the light and the colour. Art museums, in opposition with other museums, lack on the application of these additional resources. Such a work necessarily requires a multidisciplinary point of view for a holistic vision of all what a museum implies and to use all its potential as a tool of knowledge and culture for all the visitors. |
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Gjovik, Norway |
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CREATE |
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Admin @ si @ TeV2010 |
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1298 |
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Marta Nuñez-Garcia; Sonja Simpraga; M.Angeles Jurado; Maite Garolera; Roser Pueyo; Laura Igual |
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FADR: Functional-Anatomical Discriminative Regions for rest fMRI Characterization |
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2015 |
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Machine Learning in Medical Imaging, Proceedings of 6th International Workshop, MLMI 2015, Held in Conjunction with MICCAI 2015 |
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61-68 |
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Munich; Germany; October 2015 |
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MLMI |
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MILAB |
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Admin @ si @ NSJ2015 |
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2674 |
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Marta Ligero; Guillermo Torres; Carles Sanchez; Katerine Diaz; Raquel Perez; Debora Gil |
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Title |
Selection of Radiomics Features based on their Reproducibility |
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Conference Article |
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2019 |
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41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society |
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403-408 |
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Dimensionality reduction is key to alleviate machine learning artifacts in clinical applications with Small Sample Size (SSS) unbalanced datasets. Existing methods rely on either the probabilistic distribution of training data or the discriminant power of the reduced space, disregarding the impact of repeatability and uncertainty in features.In the present study is proposed the use of reproducibility of radiomics features to select features with high inter-class correlation coefficient (ICC). The reproducibility includes the variability introduced in the image acquisition, like medical scans acquisition parameters and convolution kernels, that affects intensity-based features and tumor annotations made by physicians, that influences morphological descriptors of the lesion.For the reproducibility of radiomics features three studies were conducted on cases collected at Vall Hebron Oncology Institute (VHIO) on responders to oncology treatment. The studies focused on the variability due to the convolution kernel, image acquisition parameters, and the inter-observer lesion identification. The features selected were those features with a ICC higher than 0.7 in the three studies.The selected features based on reproducibility were evaluated for lesion malignancy classification using a different database. Results show better performance compared to several state-of-the-art methods including Principal Component Analysis (PCA), Kernel Discriminant Analysis via QR decomposition (KDAQR), LASSO, and an own built Convolutional Neural Network. |
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Berlin; Alemanya; July 2019 |
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EMBC |
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IAM; 600.139; 600.145 |
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Admin @ si @ LTS2019 |
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3358 |
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Marta Ligero; Alonso Garcia Ruiz; Cristina Viaplana; Guillermo Villacampa; Maria V Raciti; Jaid Landa; Ignacio Matos; Juan Martin Liberal; Maria Ochoa de Olza; Cinta Hierro; Joaquin Mateo; Macarena Gonzalez; Rafael Morales Barrera; Cristina Suarez; Jordi Rodon; Elena Elez; Irene Braña; Eva Muñoz-Couselo; Ana Oaknin; Roberta Fasani; Paolo Nuciforo; Debora Gil; Carlota Rubio Perez; Joan Seoane; Enriqueta Felip; Manuel Escobar; Josep Tabernero; Joan Carles; Rodrigo Dienstmann; Elena Garralda; Raquel Perez Lopez |
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A CT-based radiomics signature is associated with response to immune checkpoint inhibitors in advanced solid tumors |
Type |
Journal Article |
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2021 |
Publication |
Radiology |
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299 |
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1 |
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109-119 |
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Background Reliable predictive imaging markers of response to immune checkpoint inhibitors are needed. Purpose To develop and validate a pretreatment CT-based radiomics signature to predict response to immune checkpoint inhibitors in advanced solid tumors. Materials and Methods In this retrospective study, a radiomics signature was developed in patients with advanced solid tumors (including breast, cervix, gastrointestinal) treated with anti-programmed cell death-1 or programmed cell death ligand-1 monotherapy from August 2012 to May 2018 (cohort 1). This was tested in patients with bladder and lung cancer (cohorts 2 and 3). Radiomics variables were extracted from all metastases delineated at pretreatment CT and selected by using an elastic-net model. A regression model combined radiomics and clinical variables with response as the end point. Biologic validation of the radiomics score with RNA profiling of cytotoxic cells (cohort 4) was assessed with Mann-Whitney analysis. Results The radiomics signature was developed in 85 patients (cohort 1: mean age, 58 years ± 13 [standard deviation]; 43 men) and tested on 46 patients (cohort 2: mean age, 70 years ± 12; 37 men) and 47 patients (cohort 3: mean age, 64 years ± 11; 40 men). Biologic validation was performed in a further cohort of 20 patients (cohort 4: mean age, 60 years ± 13; 14 men). The radiomics signature was associated with clinical response to immune checkpoint inhibitors (area under the curve [AUC], 0.70; 95% CI: 0.64, 0.77; P < .001). In cohorts 2 and 3, the AUC was 0.67 (95% CI: 0.58, 0.76) and 0.67 (95% CI: 0.56, 0.77; P < .001), respectively. A radiomics-clinical signature (including baseline albumin level and lymphocyte count) improved on radiomics-only performance (AUC, 0.74 [95% CI: 0.63, 0.84; P < .001]; Akaike information criterion, 107.00 and 109.90, respectively). Conclusion A pretreatment CT-based radiomics signature is associated with response to immune checkpoint inhibitors, likely reflecting the tumor immunophenotype. © RSNA, 2021 Online supplemental material is available for this article. See also the editorial by Summers in this issue. |
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IAM; 600.145 |
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Admin @ si @ LGV2021 |
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3593 |
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Marta Diez-Ferrer; Debora Gil; Elena Carreño; Susana Padrones; Samantha Aso; Vanesa Vicens; Noelia Cubero de Frutos; Rosa Lopez Lisbona; Carles Sanchez; Agnes Borras; Antoni Rosell |
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Title |
Positive Airway Pressure-Enhanced CT to Improve Virtual Bronchoscopic Navigation |
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2017 |
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European Respiratory Journal |
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ERJ |
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IAM |
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Admin @ si @ DGC2017b |
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3632 |
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Marta Diez-Ferrer; Debora Gil; Elena Carreño; Susana Padrones; Samantha Aso; Vanesa Vicens; Cubero Noelia; Rosa Lopez Lisbona; Carles Sanchez; Agnes Borras; Antoni Rosell |
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Positive Airway Pressure-Enhanced CT to Improve Virtual Bronchoscopic Navigation |
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2016 |
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Chest Journal |
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CHEST |
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150 |
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4 |
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1003A |
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IAM; 600.096; 600.075 |
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Admin @ si @ DGC2016 |
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3099 |
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Marta Diez-Ferrer; Debora Gil; Elena Carreño; Susana Padrones; Samantha Aso |
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Positive Airway Pressure-Enhanced CT to Improve Virtual Bronchoscopic Navigation |
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2017 |
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Journal of Thoracic Oncology |
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JTO |
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12 |
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1S |
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S596-S597 |
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Thorax CT; diagnosis; Peripheral Pulmonary Nodule |
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A main weakness of virtual bronchoscopic navigation (VBN) is unsuccessful segmentation of distal branches approaching peripheral pulmonary nodules (PPN). CT scan acquisition protocol is pivotal for segmentation covering the utmost periphery. We hypothesize that application of continuous positive airway pressure (CPAP) during CT acquisition could improve visualization and segmentation of peripheral bronchi. The purpose of the present pilot study is to compare quality of segmentations under 4 CT acquisition modes: inspiration (INSP), expiration (EXP) and both with CPAP (INSP-CPAP and EXP-CPAP). |
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IAM; 600.096; 600.075; 600.145 |
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Admin @ si @ DGC2017a |
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2883 |
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Marta Diez-Ferrer; Debora Gil; Cristian Tebe; Carles Sanchez |
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Positive Airway Pressure to Enhance Computed Tomography Imaging for Airway Segmentation for Virtual Bronchoscopic Navigation |
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2018 |
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Respiration |
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RES |
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96 |
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6 |
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525-534 |
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Multidetector computed tomography; Bronchoscopy; Continuous positive airway pressure; Image enhancement; Virtual bronchoscopic navigation |
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Abstract
RATIONALE:
Virtual bronchoscopic navigation (VBN) guidance to peripheral pulmonary lesions is often limited by insufficient segmentation of the peripheral airways.
OBJECTIVES:
To test the effect of applying positive airway pressure (PAP) during CT acquisition to improve segmentation, particularly at end-expiration.
METHODS:
CT acquisitions in inspiration and expiration with 4 PAP protocols were recorded prospectively and compared to baseline inspiratory acquisitions in 20 patients. The 4 protocols explored differences between devices (flow vs. turbine), exposures (within seconds vs. 15-min) and pressure levels (10 vs. 14 cmH2O). Segmentation quality was evaluated with the number of airways and number of endpoints reached. A generalized mixed-effects model explored the estimated effect of each protocol.
MEASUREMENTS AND MAIN RESULTS:
Patient characteristics and lung function did not significantly differ between protocols. Compared to baseline inspiratory acquisitions, expiratory acquisitions after 15 min of 14 cmH2O PAP segmented 1.63-fold more airways (95% CI 1.07-2.48; p = 0.018) and reached 1.34-fold more endpoints (95% CI 1.08-1.66; p = 0.004). Inspiratory acquisitions performed immediately under 10 cmH2O PAP reached 1.20-fold (95% CI 1.09-1.33; p < 0.001) more endpoints; after 15 min the increase was 1.14-fold (95% CI 1.05-1.24; p < 0.001).
CONCLUSIONS:
CT acquisitions with PAP segment more airways and reach more endpoints than baseline inspiratory acquisitions. The improvement is particularly evident at end-expiration after 15 min of 14 cmH2O PAP. Further studies must confirm that the improvement increases diagnostic yield when using VBN to evaluate peripheral pulmonary lesions. |
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IAM; 600.145 |
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Admin @ si @ DGT2018 |
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3135 |
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Marta Diez-Ferrer; Arturo Morales; Rosa Lopez Lisbona; Noelia Cubero; Cristian Tebe; Susana Padrones; Samantha Aso; Jordi Dorca; Debora Gil; Antoni Rosell |
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Ultrathin Bronchoscopy with and without Virtual Bronchoscopic Navigation: Influence of Segmentation on Diagnostic Yield |
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Journal Article |
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2019 |
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Respiration |
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RES |
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97 |
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3 |
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252-258 |
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Lung cancer; Peripheral lung lesion; Diagnosis; Bronchoscopy; Ultrathin bronchoscopy; Virtual bronchoscopic navigation |
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Background: Bronchoscopy is a safe technique for diagnosing peripheral pulmonary lesions (PPLs), and virtual bronchoscopic navigation (VBN) helps guide the bronchoscope to PPLs. Objectives: We aimed to compare the diagnostic yield of VBN-guided and unguided ultrathin bronchoscopy (UTB) and explore clinical and technical factors associated with better results. We developed a diagnostic algorithm for deciding whether to use VBN to reach PPLs or choose an alternative diagnostic approach. Methods: We compared diagnostic yield between VBN-UTB (prospective cases) and unguided UTB (historical controls) and analyzed the VBN-UTB subgroup to identify clinical and technical variables that could predict the success of VBN-UTB. Results: Fifty-five cases and 110 controls were included. The overall diagnostic yield did not differ between the VBN-guided and unguided arms (47 and 40%, respectively; p = 0.354). Although the yield was slightly higher for PPLs ≤20 mm in the VBN-UTB arm, the difference was not significant (p = 0.069). No other clinical characteristics were associated with a higher yield in a subgroup analysis, but an 85% diagnostic yield was observed when segmentation was optimal and the PPL was endobronchial (vs. 30% when segmentation was suboptimal and 20% when segmentation was optimal but the PPL was extrabronchial). Conclusions: VBN-guided UTB is not superior to unguided UTB. A greater impact of VBN-guided over unguided UTB is highly dependent on both segmentation quality and an endobronchial location of the PPL. Segmentation quality should be considered before starting a procedure, when an alternative technique that may improve yield can be chosen, saving time and resources. |
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IAM; 600.145; 600.139 |
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Admin @ si @ DML2019 |
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3134 |
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Mark Philip Philipsen; Jacob Velling Dueholm; Anders Jorgensen; Sergio Escalera; Thomas B. Moeslund |
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Organ Segmentation in Poultry Viscera Using RGB-D |
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Journal Article |
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2018 |
Publication |
Sensors |
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SENS |
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18 |
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1 |
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117 |
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semantic segmentation; RGB-D; random forest; conditional random field; 2D; 3D; CNN |
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We present a pattern recognition framework for semantic segmentation of visual structures, that is, multi-class labelling at pixel level, and apply it to the task of segmenting organs in the eviscerated viscera from slaughtered poultry in RGB-D images. This is a step towards replacing the current strenuous manual inspection at poultry processing plants. Features are extracted from feature maps such as activation maps from a convolutional neural network (CNN). A random forest classifier assigns class probabilities, which are further refined by utilizing context in a conditional random field. The presented method is compatible with both 2D and 3D features, which allows us to explore the value of adding 3D and CNN-derived features. The dataset consists of 604 RGB-D images showing 151 unique sets of eviscerated viscera from four different perspectives. A mean Jaccard index of 78.11% is achieved across the four classes of organs by using features derived from 2D, 3D and a CNN, compared to 74.28% using only basic 2D image features. |
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HUPBA; no proj |
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Admin @ si @ PVJ2018 |
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3072 |
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Mark Philip Philipsen; Anders Jorgensen; Thomas B. Moeslund; Sergio Escalera |
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RGB-D Segmentation of Poultry Entrails |
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2016 |
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9th Conference on Articulated Motion and Deformable Objects |
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Best commercial paper award. |
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AMDO |
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HuPBA;MILAB |
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Admin @ si @ PJM2016 |
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2848 |
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Mariona Caros; Maite Garolera; Petia Radeva; Xavier Giro |
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Automatic Reminiscence Therapy for Dementia |
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2020 |
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10th ACM International Conference on Multimedia Retrieval |
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383-387 |
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With people living longer than ever, the number of cases with dementia such as Alzheimer's disease increases steadily. It affects more than 46 million people worldwide, and it is estimated that in 2050 more than 100 million will be affected. While there are not effective treatments for these terminal diseases, therapies such as reminiscence, that stimulate memories from the past are recommended. Currently, reminiscence therapy takes place in care homes and is guided by a therapist or a carer. In this work, we present an AI-based solution to automatize the reminiscence therapy, which consists in a dialogue system that uses photos as input to generate questions. We run a usability case study with patients diagnosed of mild cognitive impairment that shows they found the system very entertaining and challenging. Overall, this paper presents how reminiscence therapy can be automatized by using machine learning, and deployed to smartphones and laptops, making the therapy more accessible to every person affected by dementia. |
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Virtual; October 2020 |
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Admin @ si @ CGR2020 |
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3529 |
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Mario Rojas; David Masip; Jordi Vitria |
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Automatic Detection of Facial Feature Points via HOGs and Geometric Prior Models |
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2011 |
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5th Iberian Conference on Pattern Recognition and Image Analysis |
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6669 |
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371-378 |
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Most applications dealing with problems involving the face require a robust estimation of the facial salient points. Nevertheless, this estimation is not usually an automated preprocessing step in applications dealing with facial expression recognition. In this paper we present a simple method to detect facial salient points in the face. It is based on a prior Point Distribution Model and a robust object descriptor. The model learns the distribution of the points from the training data, as well as the amount of variation in location each point exhibits. Using this model, we reduce the search areas to look for each point. In addition, we also exploit the global consistency of the points constellation, increasing the detection accuracy. The method was tested on two separate data sets and the results, in some cases, outperform the state of the art. |
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Las Palmas de Gran Canaria. Spain |
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Springer Berlin Heidelberg |
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0302-9743 |
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978-3-642-21256-7 |
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IbPRIA |
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OR;MV |
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Admin @ si @ RMV2011a |
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1731 |
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